CuGenDBv2

Gene ID	Lag0009266
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Unknown protein
Genome location	chr9:37522062..37523569
RNA-Seq Expression	Lag0009266
Synteny	Lag0009266
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0045689.1 hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa]

9.1e-38

85.11

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Query:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA
        MTYCYGCKPR SGPLPGPIL+LL VVF+LI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR LSSMDSS RYY C C  GWKM+CRCG G+
Subjt:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA

KAG6571042.1 hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-38

84.04

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Query:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA
        MTYCYGCKPR SGPLPGP+L+LL VVF+LIGLSSLFPSEPIDFSEFQINWPLLAVPII+LVLVR LS++DSS+RYY C C  GWKM CRCGRGA
Subjt:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA

KAG6605007.1 hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]

5.5e-35

82.61

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Query:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCACGWKMHCRCGRGA
        MTYCYG KP  SGPLPGPILVLL VVF+LIGLSSLF SEPIDFSEFQINWPLLAVPIIILVLVR+LSS+DSS+R+  C  GWKMHCRC  GA
Subjt:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCACGWKMHCRCGRGA

KGN61893.1 hypothetical protein Csa_006600 [Cucumis sativus]

8.2e-39

86.17

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Query:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA
        MTYCYGCKPR SGPLPGPIL+LL VVF+LI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR L+SMDSS RYY C C  GWKMHCRCGRG+
Subjt:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA

PKI78722.1 hypothetical protein CRG98_000947 [Punica granatum]

4.3e-11

44.57

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Query:  YCYGCK--PRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYG---CACGWKMHCRC
        YCY CK  P S GP+P  +L+ L++  + I LS L   + + +  E  INW LLAVPI+IL +V YLSS+D   ++YG   C   WK  C C
Subjt:  YCYGCK--PRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYG---CACGWKMHCRC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJB6 Uncharacterized protein

4.0e-39

86.17

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Query:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA
        MTYCYGCKPR SGPLPGPIL+LL VVF+LI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR L+SMDSS RYY C C  GWKMHCRCGRG+
Subjt:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA

A0A2C9UZU5 Uncharacterized protein

1.5e-06

43.75

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Query:  MTYCYGCKPRSS-------GPLPGPILVLLVVVFLLIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRYLSSMDSS
        MTY Y  +  +S        PLP P+L++L V+ + +G+S  F  E I + +E QINW LLA P+++L LVR+LSSM++S
Subjt:  MTYCYGCKPRSS-------GPLPGPILVLLVVVFLLIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRYLSSMDSS

A0A2I0LDH6 Uncharacterized protein

2.1e-11

44.57

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Query:  YCYGCK--PRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYG---CACGWKMHCRC
        YCY CK  P S GP+P  +L+ L++  + I LS L   + + +  E  INW LLAVPI+IL +V YLSS+D   ++YG   C   WK  C C
Subjt:  YCYGCK--PRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPI-DFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYG---CACGWKMHCRC

A0A2P5ECY5 Uncharacterized protein

4.4e-06

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Query:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEP---IDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTR-------YYGCACGWKMHCRCGR
        M YC  C+   S PL  P+++ L VV +L+ L   F  EP   ++  + QINW L+  P+++L LV +LSS++   R       Y  C C  K  C CGR
Subjt:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEP---IDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTR-------YYGCACGWKMHCRCGR

A0A5D3BJW1 Uncharacterized protein

4.4e-38

85.11

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Query:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA
        MTYCYGCKPR SGPLPGPIL+LL VVF+LI LSSLFPSEPIDFSEFQINWPLLAVPIIILVLVR LSSMDSS RYY C C  GWKM+CRCG G+
Subjt:  MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCAC--GWKMHCRCGRGA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G21180.1 unknown protein

9.8e-06

42.03

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Query:  SSGPLPGPILVLLVVVFLLIGLSSLFPS--EPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYG
        S  PLP P+L++L V  + + LSS + S  E  + +E QIN+ LL +P+ ++VLVR+LSSM++     G
Subjt:  SSGPLPGPILVLLVVVFLLIGLSSLFPS--EPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYG

AT2G21185.1 unknown protein

2.2e-05

36.78

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Query:  CYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSE-PIDFSEFQINWPLL-AVPIIILVLVRYLSSMDSSTR-YYGCACG-WKMHC
        C  C+  +S   P P++V++ V  +L+ LSS+   E  +   E  ++W LL AVP+ +L  VR LS +++S R  Y C CG W+  C
Subjt:  CYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSE-PIDFSEFQINWPLL-AVPIIILVLVRYLSSMDSSTR-YYGCACG-WKMHC

Sequences

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CDS sequence

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ATGACTTACTGCTACGGATGTAAACCTCGCTCTTCCGGACCACTCCCCGGCCCTATCCTTGTGCTTCTCGTCGTTGTCTTCCTCTTGATCGGATTGTCCTCTCTGTTCCC
TTCCGAACCTATCGACTTCTCTGAATTCCAAATCAATTGGCCTCTTCTCGCCGTTCCGATCATTATACTTGTTCTTGTTCGCTATTTGTCGTCCATGGATTCTTCAACCA
GATACTATGGCTGCGCTTGCGGCTGGAAGATGCACTGTCGGTGTGGCCGTGGCGCGTGTCACATTCAACAAAGAAACAAAGAAAAGTTGTTGGTATCAGAGCCATGCCCC
GGGAGTAGCCGTGTTGGGTGGAATCCTCGGGTTCCGAACAAAGAAGTTGTGAGCCTTAATGGTCATGGTGGAGGTCCGTGGTTGAGCTCTGGGTGGGCGGGTATACTCCG
GAGAAGAGGAGTCGTCCTAGATAAGAGCAAGAACTCTCGCTAA

mRNA sequence

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Protein sequence

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MTYCYGCKPRSSGPLPGPILVLLVVVFLLIGLSSLFPSEPIDFSEFQINWPLLAVPIIILVLVRYLSSMDSSTRYYGCACGWKMHCRCGRGACHIQQRNKEKLLVSEPCP
GSSRVGWNPRVPNKEVVSLNGHGGGPWLSSGWAGILRRRGVVLDKSKNSR

Lag0009266 (gene) of Sponge gourd (AG-4) v1 genome