; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009385 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009385
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNiemann-Pick C1 protein
Genome locationchr9:38734673..38736182
RNA-Seq ExpressionLag0009385
SyntenyLag0009385
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0048868 - pollen tube development (biological process)
GO:0090153 - regulation of sphingolipid biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005319 - lipid transporter activity (molecular function)
InterPro domainsIPR000731 - Sterol-sensing domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047847.1 Niemann-Pick C1 protein-like isoform X2 [Cucumis melo var. makuwa]7.6e-9993.66Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQP+EL+LE+RISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVAL+V DILRAEDHRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKV PHSDEPNQG +QGR GLLSRYMKDVHAPLLG WGVKI V+VIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

XP_011656918.1 NPC intracellular cholesterol transporter 1 isoform X1 [Cucumis sativus]1.7e-9893.66Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQP+EL+LEERIS ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVAL+V DILRAEDHRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKV PHSDEPNQG +QGR GLLSRYMKDVHAP LG WGVKI V+VIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

XP_022140528.1 Niemann-Pick C1 protein [Momordica charantia]1.8e-10095.61Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVG FVPMPACRVFSMFAALAVLLDFILQLSAFVAL+VFDILRAEDHRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKV PHSDEPNQG +QG+PGLLS YMKDVHAPLLGLWGVKIAVIVIFVG TLG IALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

XP_023533350.1 Niemann-Pick C1 protein-like [Cucurbita pepo subsp. pepo]9.9e-9994.15Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQPFELTLEERIS+ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAV LDFILQLSAFVAL+VFDILRAE+HRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKVPP SDEPNQG +Q R GLLSRYMKDVHAPLLGLWGVKIAV++IFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQ YFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

XP_038878641.1 NPC intracellular cholesterol transporter 1-like [Benincasa hispida]7.3e-10295.61Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQP+ELTLEERISSALVEVGPSITLASLSEILAFAVG FVPMPACRVFSMFAALAVLLDFILQLSAFVAL+VFDILRAEDHRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKVPPHSDEPNQG +QGRPGLLSRYMKDVHAPLLGLWGVKI V+VIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFD+LAEYLRIGPP+YFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

TrEMBL top hitse value%identityAlignment
A0A1S3BJ43 Niemann-Pick C1 protein-like isoform X12.4e-9893.17Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQP+EL+LE+RISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVAL+V DILRAEDHRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKV PHSDEPNQG +QGR GLLS YMKDVHAPLLG WGVKI V+VIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

A0A5A7U0V7 Niemann-Pick C1 protein-like isoform X23.7e-9993.66Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQP+EL+LE+RISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFS+FAALAVLLDFILQLSAFVAL+V DILRAEDHRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKV PHSDEPNQG +QGR GLLSRYMKDVHAPLLG WGVKI V+VIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

A0A6J1CI77 Niemann-Pick C1 protein8.7e-10195.61Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVG FVPMPACRVFSMFAALAVLLDFILQLSAFVAL+VFDILRAEDHRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKV PHSDEPNQG +QG+PGLLS YMKDVHAPLLGLWGVKIAVIVIFVG TLG IALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

A0A6J1G6Q4 Niemann-Pick C1 protein-like2.4e-9893.66Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQPFELTLEERIS+ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAV LDFILQLSAFVAL+VFDI RAE+HRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKVPP SDEPNQG +Q R GLLSRYMKDVHAPLLGLWGVKIAV++IFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQ YFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

A0A6J1I473 Niemann-Pick C1 protein-like1.4e-9893.66Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQPFELTLEERIS+ALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAV LDFILQLSAFVAL+VFDILRAE+HRVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIKVPP SDEPNQG +Q R GLLSRYMKDVHAPLLGLWGVKIAV++IFVGLTLGSI LSTKIEVGLEQKIVLPRDSYLQ YFDDLAEYLRIGPPLYFVV
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        KDYNY
Subjt:  KDYNY

SwissProt top hitse value%identityAlignment
O15118 NPC intracellular cholesterol transporter 11.4e-3442.36Show/hide
Query:  VGVDNMCILVHAVKRQP--FELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVD
        VGVDN+ ILV A +R       TL++++   L EV PS+ L+S SE +AF +G    MPA   FS+FA LAV +DF+LQ++ FV+LL  DI R E +R+D
Subjt:  VGVDNMCILVHAVKRQP--FELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVD

Query:  CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV
         F C++      E     Q     L R+ K+ ++PLL    ++  VI IFVG+   SIA+  K+++GL+Q + +P DSY+ DYF  +++YL  GPP+YFV
Subjt:  CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV

Query:  VKD
        +++
Subjt:  VKD

O35604 NPC intracellular cholesterol transporter 13.6e-3542.03Show/hide
Query:  VGVDNMCILVHAVKRQP--FELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVD
        VGVDN+ ILV   +R     E TL++++   L EV P++ L+S SE  AF  G    MPA   FS+FA +AVL+DF+LQ++ FV+LL  DI R E + +D
Subjt:  VGVDNMCILVHAVKRQP--FELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVD

Query:  CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV
           C++      +  QGS      L R+ K+  APLL    ++  V+ +FVG+   S+A+  K+++GL+Q + +P DSY+ DYF  LA+YL  GPP+YFV
Subjt:  CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV

Query:  VKD-YNY
        +++ YNY
Subjt:  VKD-YNY

P56941 NPC intracellular cholesterol transporter 14.7e-3541.94Show/hide
Query:  VGVDNMCILVHAVKRQP--FELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVD
        VGVDN+ ILV   +R       TL++++   L EV PS+ L+S SE +AF +G    +PA   FS+FA +AVL+DF+LQ++ FV+LL  DI R E +R+D
Subjt:  VGVDNMCILVHAVKRQP--FELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVD

Query:  CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV
           C++      E   G Q     L R+ K+ +APLL    ++  VI +FVG+   SIA+  K+E+GL+Q + +P DSY+ DYF  L+ YL  GPP+YFV
Subjt:  CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFV

Query:  VKD-YNYRYLSDFLSTC
        V++ +NY  L      C
Subjt:  VKD-YNYRYLSDFLSTC

Q6T3U3 NPC1-like intracellular cholesterol transporter 11.6e-3039.82Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEER---ISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRV
        VG DN+ I V   +R P  +  E+R   I   L  V PS+ L SLSE + F +G   PMPA R F++ + LA++LDF+LQ++AFVALL  D  R E  R 
Subjt:  VGVDNMCILVHAVKRQPFELTLEER---ISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRV

Query:  D---CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPP
        D   CF   K+PP  +        + GLL R+ + ++AP L    ++  V+++F+ L   ++ L   I VGL+Q++ LP+DSYL DYF  L  YL +GPP
Subjt:  D---CFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPP

Query:  LYFV-VKDYNYRYLSDFLSTC
        +YFV    +N+   +   +TC
Subjt:  LYFV-VKDYNYRYLSDFLSTC

Q9UHC9 NPC1-like intracellular cholesterol transporter 14.5e-3042.79Show/hide
Query:  VGVDNMCILV---HAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRV
        VG DN+ I V     + R+P E   E  I  AL  V PS+ L SLSE + F +G   PMPA R F++ + LAV+LDF+LQ+SAFVALL  D  R E  R+
Subjt:  VGVDNMCILV---HAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRV

Query:  DCFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYF
        D   C+K P     P QG     GLL  + +  +AP L  W  +  V+++F+ L   S+     I VGL+Q++ LP+DSYL DYF  L  Y  +G P+YF
Subjt:  DCFPCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYF

Query:  VVK-DYNY
        V    YN+
Subjt:  VVK-DYNY

Arabidopsis top hitse value%identityAlignment
AT1G42470.1 Patched family protein2.4e-7471.22Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQ  EL LE RIS+AL+EVGPSITLASL+EILAFAVG F+ MPA RVFSMFAALAVLLDF+LQ++AFVAL+VFD  R ED RVDCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV
        PCIK    S    +G  Q + GLL+RYMK+VHAP+L  W VKI VI  F GL +  IALST+IE GLEQ+IVLP+DSYLQ YF++++ YLRIGPPLYFV+
Subjt:  PCIKVPPHSDEPNQG-SQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVV

Query:  KDYNY
        K+YNY
Subjt:  KDYNY

AT4G38350.1 Patched family protein1.6e-8374.51Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQP E++LE+RISSALVEVGPSITLASLSE+LAFAVG FVPMPACR+FSMFAALA++LDF LQ++AFVAL+VFD  R+ D+R+DCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVK
        PCIKVP  S E  +G +  PG L RYMK+VHAP+LGLWGVK+ V+ +F    L SIA+S ++E GLEQKIVLPRDSYLQDYFD L+EYLR+GPPLYFVVK
Subjt:  PCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVK

Query:  DYNY
        +YNY
Subjt:  DYNY

AT4G38350.2 Patched family protein1.6e-8374.51Show/hide
Query:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF
        VGVDNMCILVHAVKRQP E++LE+RISSALVEVGPSITLASLSE+LAFAVG FVPMPACR+FSMFAALA++LDF LQ++AFVAL+VFD  R+ D+R+DCF
Subjt:  VGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCF

Query:  PCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVK
        PCIKVP  S E  +G +  PG L RYMK+VHAP+LGLWGVK+ V+ +F    L SIA+S ++E GLEQKIVLPRDSYLQDYFD L+EYLR+GPPLYFVVK
Subjt:  PCIKVPPHSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVK

Query:  DYNY
        +YNY
Subjt:  DYNY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAGTTGGAGTTGATAACATGTGTATATTAGTACATGCTGTGAAACGACAACCATTCGAGTTGACTTTAGAAGAGCGCATAAGCAGTGCGCTGGTTGAAGTTGG
TCCTTCCATAACACTAGCTAGTTTGTCAGAGATCTTGGCTTTTGCCGTTGGAACTTTTGTTCCTATGCCAGCATGTCGTGTCTTTTCCATGTTTGCTGCTTTGGCTGTGT
TGCTGGACTTCATTCTTCAACTATCGGCATTTGTAGCTCTTTTAGTCTTTGATATTTTGAGAGCTGAGGATCACAGAGTCGACTGTTTTCCGTGCATAAAAGTTCCTCCA
CATTCTGATGAACCTAACCAAGGCTCTCAGGGGAGACCTGGGCTTCTTTCTCGGTACATGAAGGATGTTCATGCACCCCTTCTTGGACTTTGGGGAGTTAAGATTGCTGT
TATTGTCATCTTTGTTGGCTTGACTTTAGGAAGCATTGCATTATCTACAAAGATTGAGGTCGGTTTGGAACAAAAGATTGTCCTCCCACGAGATTCTTACCTTCAGGATT
ATTTTGATGATCTCGCAGAATATCTACGAATTGGACCACCATTATATTTTGTTGTGAAGGATTATAATTATAGGTATCTGTCTGATTTTCTATCCACGTGTTTCAATTAT
GAATCTGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATAGAGTTGGAGTTGATAACATGTGTATATTAGTACATGCTGTGAAACGACAACCATTCGAGTTGACTTTAGAAGAGCGCATAAGCAGTGCGCTGGTTGAAGTTGG
TCCTTCCATAACACTAGCTAGTTTGTCAGAGATCTTGGCTTTTGCCGTTGGAACTTTTGTTCCTATGCCAGCATGTCGTGTCTTTTCCATGTTTGCTGCTTTGGCTGTGT
TGCTGGACTTCATTCTTCAACTATCGGCATTTGTAGCTCTTTTAGTCTTTGATATTTTGAGAGCTGAGGATCACAGAGTCGACTGTTTTCCGTGCATAAAAGTTCCTCCA
CATTCTGATGAACCTAACCAAGGCTCTCAGGGGAGACCTGGGCTTCTTTCTCGGTACATGAAGGATGTTCATGCACCCCTTCTTGGACTTTGGGGAGTTAAGATTGCTGT
TATTGTCATCTTTGTTGGCTTGACTTTAGGAAGCATTGCATTATCTACAAAGATTGAGGTCGGTTTGGAACAAAAGATTGTCCTCCCACGAGATTCTTACCTTCAGGATT
ATTTTGATGATCTCGCAGAATATCTACGAATTGGACCACCATTATATTTTGTTGTGAAGGATTATAATTATAGGTATCTGTCTGATTTTCTATCCACGTGTTTCAATTAT
GAATCTGTGTGA
Protein sequenceShow/hide protein sequence
MDRVGVDNMCILVHAVKRQPFELTLEERISSALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLDFILQLSAFVALLVFDILRAEDHRVDCFPCIKVPP
HSDEPNQGSQGRPGLLSRYMKDVHAPLLGLWGVKIAVIVIFVGLTLGSIALSTKIEVGLEQKIVLPRDSYLQDYFDDLAEYLRIGPPLYFVVKDYNYRYLSDFLSTCFNY
ESV