CuGenDBv2

Gene ID	Lag0009391
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	F-box family protein with a domain of Uncharacterized protein function
Genome location	chr9:38806808..38807544
RNA-Seq Expression	Lag0009391
Synteny	Lag0009391
Gene Ontology terms	NA
InterPro domains	IPR027949 - Petal formation-expressed

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8647657.1 hypothetical protein Csa_003355 [Cucumis sativus]

2.4e-38

59.32

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------
        MEK+L LDKAYPLPLLGAMLEKF KT +PASWWPNSS NYES+ +N+  HFDGKQ RE+ G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD
          GP  T IAALSSAFVG+WSS G+VV AAAAGSL AAVN LEHGGQIGMVFEMYRN+AGFFGLLEESI+      D
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD

KAG6603785.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]

8.1e-39

58.76

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------
        MEK+L LD+AYPLPLLG MLEKF K  EPASWWPNSS+  ESKTENE AHFDG QR+   G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD
          GP  T IAAL SAFVG+WSSAG+VV AAAAGSL AAVNALEHGGQIGMVFEMYRNSAGFFG++EESI+      D
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD

KAG7033956.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]

8.1e-39

58.76

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------
        MEK+L LD+AYPLPLLG MLEKF K  EPASWWPNSS+  ESKTENE AHFDG QR+   G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD
          GP  T IAAL SAFVG+WSSAG+VV AAAAGSL AAVNALEHGGQIGMVFEMYRNSAGFFG++EESI+      D
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD

XP_023517817.1 probable F-box protein At4g22030 [Cucurbita pepo subsp. pepo]

2.1e-39

58.19

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNYESKTENEKAHFDGKQREAGFNGH--------------------------------------
        M ++L LDKAYPLPLLGAMLEKF KTF+PASWWPNSSNY++KT+NE+AHFDGKQ E  FNG                                       
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNYESKTENEKAHFDGKQREAGFNGH--------------------------------------

Query:  -LGPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD
          GP  T IAALSSAFVG+WS     V AA AGSL AAVN+ EHGGQIGMVFEMYRNSAGFFGLLEESI      AD
Subjt:  -LGPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD

XP_038883638.1 probable F-box protein At4g22030 [Benincasa hispida]

1.3e-41

61.58

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSN-YESKTENEKAHFDGKQR--EAGFNGHL----------------------------------
        MEK+L LDKAYPLPLLG MLEKF KT EPASWWPNSSN YES+T++EKAHFDGKQR    G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSN-YESKTENEKAHFDGKQR--EAGFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD
          GP  T +AALSSAFVG+WSSAG+VV AAAAGSL AAVNALEHGGQ+GMVFEMYRNSAGFFGLLEESIK      D
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KL68 Uncharacterized protein

8.7e-39

53.43

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------
        M+K+L +DKAYPLPLLGAMLEKF KT EPASWWPNSS NYES+T+N   HFDGKQ R++ G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESI-----------KENANAADKKVVHHWSTVVG
          GP  T IAALSSAFVG+WSSAG+ V AA AGSL AAVNALEHGGQIGMVFEMYRNSAGFFGLLEESI           +EN    ++KV   +   + 
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESI-----------KENANAADKKVVHHWSTVVG

Query:  SVRE
         +R+
Subjt:  SVRE

A0A0A0KN03 Uncharacterized protein

1.1e-38

59.32

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------
        MEK+L LDKAYPLPLLGAMLEKF KT +PASWWPNSS NYES+ +N+  HFDGKQ RE+ G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD
          GP  T IAALSSAFVG+WSS G+VV AAAAGSL AAVN LEHGGQIGMVFEMYRN+AGFFGLLEESI+      D
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD

A0A5D3CM83 Putative F-box protein

2.5e-38

61.18

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------
        MEK+L LDKAYPLPLLG MLEKF KTFEPASWWPNSS NYES+T+NE  + D KQ RE+ G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSS-NYESKTENEKAHFDGKQ-REA-GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK
          GP  + IAALSSAFVG+WSSAG+ V AAAAGSL AAVNALEHGGQIGMVFEMYRN+AGFFGLLEESI+
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK

A0A6J1GFH9 probable F-box protein At4g22030

4.3e-38

59.41

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------
        MEK+L LD+AYPLPLLG MLEKF K  EPASWWPNSS+  ESKTENE AHFDG QR+   G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK
          GP  T IAAL SAFVG+WSS G+VV AAAAGSL AA+NALEHGGQIGMVFEMYRNSAGFFG++EESI+
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK

A0A6J1IPN6 probable F-box protein At4g22030

1.1e-38

58.19

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------
        MEK+L LDKAYPLPLLG MLEKF K  EPASWWPNSS+  ESKTENE +HFDG QR+   G++  L                                  
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNY-ESKTENEKAHFDGKQREA--GFNGHL----------------------------------

Query:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD
          GP  T IAAL SAFVG+WSS G+VV AAAAGSL AAVNALEHGGQIGMVFEMYRNSAGFFG++EESI+      D
Subjt:  --GPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAAD

SwissProt top hits

e value

%identity

Alignment

O65451 Probable F-box protein At4g22030

1.3e-23

44.19

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWP-----------NSSNYESKTENEKAHF-------DGKQREAGFNGHL---------GPSSTAIAAL
        ++++L LDKAYPLPL+G MLEKF + F+PA+WWP            ++ + S+ E E           D ++ E   N  L         GP  T IAA+
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWP-----------NSSNYESKTENEKAHF-------DGKQREAGFNGHL---------GPSSTAIAAL

Query:  SSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK----ENANAADKKV
        SS F+G+ S    VVA   A SL A VN LEHGGQ+GMV EMYRNSAGFF L+E++IK    EN    + KV
Subjt:  SSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK----ENANAADKKV

Arabidopsis top hits

e value

%identity

Alignment

AT4G04480.1 unknown protein

1.9e-25

43.79

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNYESKTE-------------NEKAHF----DGKQREAGFNGHL-----------GPSSTAIAA
        ++++L LDKAYPLPL+G MLEKF + F+PA+WWP +     KT               E AH     D ++ E    GH+           GP  T ++A
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNYESKTE-------------NEKAHF----DGKQREAGFNGHL-----------GPSSTAIAA

Query:  LSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAADKKV
        +SS F+G  S    +VA   A SL A VN LEHGGQ+GMVFEMYRNSAGFF LLEE++K      + +V
Subjt:  LSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIKENANAADKKV

AT4G22030.1 F-box family protein with a domain of unknown function (DUF295)

9.3e-25

44.19

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Query:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWP-----------NSSNYESKTENEKAHF-------DGKQREAGFNGHL---------GPSSTAIAAL
        ++++L LDKAYPLPL+G MLEKF + F+PA+WWP            ++ + S+ E E           D ++ E   N  L         GP  T IAA+
Subjt:  MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWP-----------NSSNYESKTENEKAHF-------DGKQREAGFNGHL---------GPSSTAIAAL

Query:  SSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK----ENANAADKKV
        SS F+G+ S    VVA   A SL A VN LEHGGQ+GMV EMYRNSAGFF L+E++IK    EN    + KV
Subjt:  SSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIGMVFEMYRNSAGFFGLLEESIK----ENANAADKKV

Sequences

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CDS sequence

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ATGGAAAAGATCTTGGTGCTTGATAAAGCATACCCACTTCCCTTACTTGGTGCAATGCTTGAAAAATTCTCCAAAACCTTCGAGCCGGCTTCATGGTGGCCCAATTCTTC
TAACTACGAATCGAAGACGGAGAATGAAAAAGCCCACTTTGATGGAAAGCAACGTGAAGCTGGCTTTAATGGCCATCTCGGGCCCTCTTCCACCGCCATTGCGGCTTTGA
GTTCTGCTTTTGTGGGTAATTGGTCATCGGCGGGGATAGTGGTGGCGGCGGCGGCGGCTGGATCTTTGGGCGCCGCCGTGAATGCGTTAGAGCACGGTGGGCAAATAGGG
ATGGTGTTTGAGATGTATAGAAACTCTGCTGGCTTCTTCGGGTTATTGGAAGAATCCATTAAGGAAAACGCGAACGCCGCTGACAAAAAAGTCGTCCACCACTGGAGTAC
TGTTGTCGGTTCAGTTCGAGAAAAAAAAAACCCAGTCGTTTCAGATCCATTTCAGATCTGCCTTCTTAGTTTCGTTTCATATCCATTCCAGCCGTTTGCTGGTTCGTTTG
TCAGCGGCGCGGTTCACTGGATTTCGTTTCAGTGCTGTTTTCATGGGTATACTGGGGTAGAACGAGCGTGA

mRNA sequence

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Protein sequence

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MEKILVLDKAYPLPLLGAMLEKFSKTFEPASWWPNSSNYESKTENEKAHFDGKQREAGFNGHLGPSSTAIAALSSAFVGNWSSAGIVVAAAAAGSLGAAVNALEHGGQIG
MVFEMYRNSAGFFGLLEESIKENANAADKKVVHHWSTVVGSVREKKNPVVSDPFQICLLSFVSYPFQPFAGSFVSGAVHWISFQCCFHGYTGVERA

Lag0009391 (gene) of Sponge gourd (AG-4) v1 genome