| GenBank top hits | e value | %identity | Alignment |
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| XP_012461392.1 PREDICTED: uncharacterized protein LOC105781396 [Gossypium raimondii] | 1.2e-27 | 51.91 | Show/hide |
Query: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
+R+L P+S+E++ + M PTKA G DG A+ YQK W VG+D++ CL IL E+ PIN T I IPKV P M +FRPISLCNV+YK+IAK
Subjt: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
Query: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
LANR ++V G I QS F+P R SDNVL
Subjt: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| XP_015384883.1 uncharacterized protein LOC107176610 [Citrus sinensis] | 8.6e-29 | 51.15 | Show/hide |
Query: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSW-DVGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
+R+LD+PF+ E++ T MSPTKA GPDG+ A +QK W V +I CL IL + ++P+N T I+ IPKV +P R+S FRPISLCNV+Y+++AKT
Subjt: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSW-DVGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
Query: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
+ANR+K + +IS TQS FIP R SDN +
Subjt: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| XP_024033492.1 uncharacterized protein LOC112095617 [Citrus clementina] | 8.6e-29 | 51.15 | Show/hide |
Query: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSW-DVGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
+R+LD+PF+ E++ T MSPTKA GPDG+ A +QK W V +I CL IL + ++P+N T I+ IPKV +P R+S FRPISLCNV+Y+++AKT
Subjt: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSW-DVGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
Query: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
+ANR+K + +IS TQS FIP R SDN +
Subjt: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| XP_024039324.1 uncharacterized protein LOC112097962 [Citrus clementina] | 2.3e-29 | 41.94 | Show/hide |
Query: WIVGGDLNEIMYNKEKNEIMYNKEKKGGVPKPFKLLNDFCETIRYCDLIDVGFSGDRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGE
W+ GD N Y K K K G+ + D + I V S + +L+ PF++E++ L MSPTKA GPDG+ A+ +QK W V
Subjt: WIVGGDLNEIMYNKEKNEIMYNKEKKGGVPKPFKLLNDFCETIRYCDLIDVGFSGDRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGE
Query: DIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
+I C+ IL + +N T I+ IPK +PK++++FRPISLCNV+Y++IAKT+ANR+K + IISPTQS FIP R SDNV+
Subjt: DIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata] | 1.2e-27 | 50 | Show/hide |
Query: DLIDVGFSGDRR--LDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISL
D +D + D R L F+ E+++A L M PTKA GPDG++A+ YQK W VG+ ++ L L + + IN T I IPKV+ P+RMS+FRPISL
Subjt: DLIDVGFSGDRR--LDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISL
Query: CNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
CNV+YK+I+K LANR+K V IIS TQS F+P R +DNVL
Subjt: CNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A5B6V614 Reverse transcriptase | 2.3e-27 | 50.34 | Show/hide |
Query: RYCDLIDVGFSGD--RRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRP
R DL++ S D L PFS+E++ +KSM+P KA G DG A+ +QK W+ +G DI + CL IL + EM INKT I IPKV PK +S+FRP
Subjt: RYCDLIDVGFSGD--RRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRP
Query: ISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
ISLCNV+YK+IAK + NRM V G I Q FI RQ SDN L
Subjt: ISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| A0A5B6VYT4 Reverse transcriptase | 6.6e-27 | 38.07 | Show/hide |
Query: WEDHDTMSLPWIVGGDLNEIMYNK------EKNEIMYNKEKKG-GVPKPFKLLN-------------DFCETIRYCDLIDVGFSGDR--RLDTPFSKEKL
WE ++ W+ GD N +++ ++N+I+ ++K+G V + ++LN + R DL++ + D L PFS+E++
Subjt: WEDHDTMSLPWIVGGDLNEIMYNK------EKNEIMYNKEKKG-GVPKPFKLLN-------------DFCETIRYCDLIDVGFSGDR--RLDTPFSKEKL
Query: EATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSII
+KS +P KA G DG A+ +QK WD VG DI + CL +L + EM+ INKT I IPKV PK++S+F PISLCNV+YK+IAK + NRM + G I
Subjt: EATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSII
Query: SPTQSTFIPRRQTSDNVL
Q FI RQ SDN L
Subjt: SPTQSTFIPRRQTSDNVL
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| A0A5B6WI49 Reverse transcriptase | 3.9e-27 | 33.21 | Show/hide |
Query: PWIVGGDLNEIMYNKEKNEIMYNKEKKGGVPKPFKLLNDFCETIRYCDLIDVGFSGD---------------RRLD------------------------
PW+V D NEI+Y EKKGG+P+ K + +F + + C L D+G+SG+ RLD
Subjt: PWIVGGDLNEIMYNKEKNEIMYNKEKKGGVPKPFKLLNDFCETIRYCDLIDVGFSGD---------------RRLD------------------------
Query: ---------------------------------------TPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINK
F+KE+++ LK M PTKA G DG+ A+ YQK W +GED+ CL L ++ INK
Subjt: ---------------------------------------TPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINK
Query: TLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
T I IPKV P +S+FRPISLCNV+YK+IAK +ANR++ V I QS F+P R DNVL
Subjt: TLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| A0A6J1DX30 uncharacterized protein LOC111024874 | 3.9e-27 | 47.33 | Show/hide |
Query: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
+ +L P++KE++E ++ M PTKALGPDG A+ YQ W VG + CL L + ++++ N T I+ IPK+K+P+ +S FRPISLCNV YK+I+K+
Subjt: DRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKT
Query: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
+ NR+K V G +IS QS F+P R SDNV+
Subjt: LANRMKTVFGSIISPTQSTFIPRRQTSDNVL
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| A0A6J5UD52 Reverse transcriptase domain-containing protein | 3.9e-27 | 49.23 | Show/hide |
Query: PFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMK
P+S++++E L S+ P+KA GPDG+ A+ YQK W VG D+ +C+ +L + + N TL++ IPKV P R+S++RPISLCNV+YK+I+KTLANR+K
Subjt: PFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVKEPKRMSKFRPISLCNVVYKLIAKTLANRMK
Query: TVFGSIISPTQSTFIPRRQTSDNVLTLLIT
V +IS QS FIP R DNVL T
Subjt: TVFGSIISPTQSTFIPRRQTSDNVLTLLIT
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| SwissProt top hits | e value | %identity | Alignment |
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| O00370 LINE-1 retrotransposable element ORF2 protein | 1.8e-05 | 31.3 | Show/hide |
Query: LDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWDVGEDIIRVCLGIL--THKEEMEP--INKTLISPIPKV-KEPKRMSKFRPISLCNVVYKLIAK
L+ P + ++ A + S+ K+ GPDG A YQ+ E+++ L + KE + P + I IPK ++ + FRPISL N+ K++ K
Subjt: LDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWDVGEDIIRVCLGIL--THKEEMEP--INKTLISPIPKV-KEPKRMSKFRPISLCNVVYKLIAK
Query: TLANRMKTVFGSIISPTQSTFIPRRQTSDNV
LANR++ +I Q FIP Q N+
Subjt: TLANRMKTVFGSIISPTQSTFIPRRQTSDNV
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| P08548 LINE-1 reverse transcriptase homolog | 6.0e-09 | 26.37 | Show/hide |
Query: NEIMYNKEKNEIMYNKEKKGGVPKPFKLLNDFCETIRYCDLIDVGFSGDRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWDVGEDIIRVCLG
+EI + + + + N+ K ++ L + + + C L + L+ P S ++ +T++++ K+ GPDG + YQ E+++ + L
Subjt: NEIMYNKEKNEIMYNKEKKGGVPKPFKLLNDFCETIRYCDLIDVGFSGDRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWDVGEDIIRVCLG
Query: ILTHKEEMEPINKTL----ISPIPKV-KEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNV
+ + E+ + T I+ IPK K+P R +RPISL N+ K++ K L NR++ II Q FIP Q N+
Subjt: ILTHKEEMEPINKTL----ISPIPKV-KEPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNV
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| P11369 LINE-1 retrotransposable element ORF2 protein | 7.6e-12 | 38.64 | Show/hide |
Query: LDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWDVGEDIIRVCLGILTHKEEME-----PINKTLISPIPK-VKEPKRMSKFRPISLCNVVYKLIA
L++P S +++EA + S+ K+ GPDG A YQ ED+I + L L HK E+E + I+ IPK K+P ++ FRPISL N+ K++
Subjt: LDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWDVGEDIIRVCLGILTHKEEME-----PINKTLISPIPK-VKEPKRMSKFRPISLCNVVYKLIA
Query: KTLANRMKTVFGSIISPTQSTFIPRRQTSDNV
K LANR++ +II P Q FIP Q N+
Subjt: KTLANRMKTVFGSIISPTQSTFIPRRQTSDNV
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| P14381 Transposon TX1 uncharacterized 149 kDa protein | 8.9e-13 | 30.57 | Show/hide |
Query: PFKLLNDFCETIRYCDLIDVGFSGDRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVK
P + D CE + + L V RL+TP + ++L L+ M K+ G DG+ +Q WD +G D RV E + ++S +PK
Subjt: PFKLLNDFCETIRYCDLIDVGFSGDRRLDTPFSKEKLEATLKSMSPTKALGPDGVHAMLYQKSWD-VGEDIIRVCLGILTHKEEMEPINKTLISPIPKVK
Query: EPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVLTL
+ + + +RP+SL + YK++AK ++ R+K+V +I P QS +P R DNV +
Subjt: EPKRMSKFRPISLCNVVYKLIAKTLANRMKTVFGSIISPTQSTFIPRRQTSDNVLTL
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