; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009403 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009403
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:38950393..38951118
RNA-Seq ExpressionLag0009403
SyntenyLag0009403
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7819670.1 uncharacterized protein G2W53_025125 [Senna tora]3.3e-1533.54Show/hide
Query:  RWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGV
        +W PP+    K N DA++ + M  S +  IIR+  GR ++ + K       VD LEA+ + + L+ AK   +L +EVE DSA+V  L+  +  D S +G+
Subjt:  RWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGV

Query:  LVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQG----VWLEETPMSLEEVYCNEI
        ++++I+++S    F S  W  RE N +AH  A   VE         VWLE+ P+    + CN +
Subjt:  LVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQG----VWLEETPMSLEEVYCNEI

XP_023876296.1 uncharacterized protein LOC111988743 [Quercus suber]4.3e-1535Show/hide
Query:  WMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVL
        W+ P    YK N DAA+ K +  S + AIIR+ +G VM  +      V+D +  E +  R ++  A +AG   L +E D+A V+A +     D S +G +
Subjt:  WMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVL

Query:  VQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNEIL
        VQ++  ++ GL++ S S   R AN VAH  AR    +    +WLEETP  + E   N++L
Subjt:  VQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNEIL

XP_023880084.1 uncharacterized protein LOC111992454 [Quercus suber]3.0e-1635.62Show/hide
Query:  WMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVL
        W PP+S++YK N DA +   +  S + AIIR+  G VM  L     +VQD +  E +  R +L  A + G+L L +E D+A V+  + S   D S +G +
Subjt:  WMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVL

Query:  VQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNEIL
        +++I  +  GL++ SVS   R AN VAH  AR    +  + VW+E++P    E   N+ L
Subjt:  VQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNEIL

XP_023885847.1 keratin, type I cytoskeletal 13-like [Quercus suber]4.3e-1531.79Show/hide
Query:  EYLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLE
        +YLD ++  + +     ++    I W PP +  YK N DAA+   +  S   AIIR+ EG VM  +        +    EA+  R ++  A EAG  RL 
Subjt:  EYLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLE

Query:  VELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETP
        +E D+A V+  I S   + S +G + ++I  + +GLQ+ S+S   R+ N+VAH+ AR    +  +  W+E++P
Subjt:  VELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETP

XP_030963892.1 uncharacterized protein LOC115985062 [Quercus lobata]2.5e-1533.13Show/hide
Query:  RREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDC
        +R+   W PP+S++YK N DAA+   +  S + AIIR+  G VM  L     +VQD +  E +  R +L  A + G+  L +E D+  V+  + S   D 
Subjt:  RREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDC

Query:  SEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNEIL
        S +G ++++I  + + L++ SVS   R AN VAH+ +R    +  + VW+E++P    E   N+ L
Subjt:  SEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNEIL

TrEMBL top hitse value%identityAlignment
A0A2N9EZZ2 Uncharacterized protein4.6e-1532.69Show/hide
Query:  RWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGV
        RWMPP    YK N D AV K    + +  I+RD++G VM +L + V +   V ++EA  ++ S+  A E G+   E E DS  +V  + ++    +  G+
Subjt:  RWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGV

Query:  LVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVY
        L+ +  +++  LQ  S S   RE N +AH  AR+        +W+E  P  LE++Y
Subjt:  LVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVY

A0A2N9FJ03 Reverse transcriptase domain-containing protein2.1e-1527.47Show/hide
Query:  YLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEV
        YL+ + + N +          GI+W PP    +K N D AV +    + +  ++RD EG+VM +L++ V + Q V+ +EA   + ++    E G+   E 
Subjt:  YLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEV

Query:  ELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNE
        E DS  +VA + +     +  G L+ +   ++ GL+ CS +   R+ N +AH  AR  +      VW+E+ P   +++Y ++
Subjt:  ELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNE

A0A2N9HRK6 Uncharacterized protein8.4e-1729.67Show/hide
Query:  YLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEV
        YLD F +          +  +  +W PP+ +N+K N D A+ K    + +  I+R+ EG+VM +L++ V Y Q V+++EA   R ++    E GL   E 
Subjt:  YLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEV

Query:  ELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNE
        E DS  VVA + S   + +  G L++++  ++ GL     +   R+ N +AH  AR  +      VW+E+ P   + +Y +E
Subjt:  ELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNE

A0A2N9J7Z2 Reverse transcriptase domain-containing protein3.5e-1529.19Show/hide
Query:  GIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEV
        GI+W PP    +K N D AV +    + +  ++RD EG+VM +L++ V + Q V+ +EA   + ++    E G+  +E E DS  +VA + +     +  
Subjt:  GIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEV

Query:  GVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNE
        G L+ +   ++ GL+ CS +   R+ N +AH  AR  +      VW+E+ P   +++Y ++
Subjt:  GVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNE

A0A6J1C467 uncharacterized protein LOC1110077754.6e-1533.84Show/hide
Query:  DGNGWL------WVSEYLDHFRAFNGRRVCGGLVRREGIR---WMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAM
        +G+G+L      WV++YL  +++         L+   G R   W PP +  +K N DAA  K   S+ L  +IRD+   V+L+ M  +++V DV   E +
Subjt:  DGNGWL------WVSEYLDHFRAFNGRRVCGGLVRREGIR---WMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAM

Query:  VIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQF-CSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEV
          ++ +  A EAGL+  ++E DS++V  L+R++  D SE+GVL   I  I   L      S+  RE N  AHT AR  +      VW+EE    L EV
Subjt:  VIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQF-CSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGCCGATTGTTTTGAGAATTTGTTGTTTTGGGCTGGTGGCTGTGGAATAGGAGGAATAAGAGGGTTGTTGGTGGAGGGAATTTGGGAGGGGGATGGAAATGGGTG
GTTGTGGGTCTCTGAGTATTTAGACCATTTTAGGGCTTTCAATGGGAGGAGAGTGTGTGGGGGTCTGGTTCGAAGGGAAGGGATACGGTGGATGCCACCAAATTCAGAGA
ATTATAAGTTTAATACAGATGCAGCAGTATGCAAAGCAATGAAGTCCAGCAGTTTGGCAGCAATTATTCGAGACGCCGAAGGAAGAGTTATGCTTACATTGATGAAATTA
GTCTCTTATGTGCAAGATGTGGATGCTCTTGAGGCTATGGTGATCCGTGACAGCCTGCTTGCTGCTAAGGAAGCTGGCCTCCTGAGATTGGAGGTGGAATTGGACTCAGC
TCGCGTCGTGGCTTTGATTCGGTCCGAAAAGAGGGATTGTTCTGAAGTGGGCGTCCTCGTGCAAGAAATTATCCAGATCTCGAAGGGTCTGCAGTTCTGTTCCGTGAGTT
GGTGCCTAAGGGAAGCAAATCTGGTGGCGCATACGGCGGCGCGTCAGGTCGTGGAGCTGGGTATTCAAGGCGTCTGGTTGGAGGAGACGCCGATGTCGTTGGAGGAGGTC
TATTGCAATGAAATTTTGGACAACCAAGGAGAGAGGTTGTGTTTCTTGTTTGAGGGTTCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGCCGATTGTTTTGAGAATTTGTTGTTTTGGGCTGGTGGCTGTGGAATAGGAGGAATAAGAGGGTTGTTGGTGGAGGGAATTTGGGAGGGGGATGGAAATGGGTG
GTTGTGGGTCTCTGAGTATTTAGACCATTTTAGGGCTTTCAATGGGAGGAGAGTGTGTGGGGGTCTGGTTCGAAGGGAAGGGATACGGTGGATGCCACCAAATTCAGAGA
ATTATAAGTTTAATACAGATGCAGCAGTATGCAAAGCAATGAAGTCCAGCAGTTTGGCAGCAATTATTCGAGACGCCGAAGGAAGAGTTATGCTTACATTGATGAAATTA
GTCTCTTATGTGCAAGATGTGGATGCTCTTGAGGCTATGGTGATCCGTGACAGCCTGCTTGCTGCTAAGGAAGCTGGCCTCCTGAGATTGGAGGTGGAATTGGACTCAGC
TCGCGTCGTGGCTTTGATTCGGTCCGAAAAGAGGGATTGTTCTGAAGTGGGCGTCCTCGTGCAAGAAATTATCCAGATCTCGAAGGGTCTGCAGTTCTGTTCCGTGAGTT
GGTGCCTAAGGGAAGCAAATCTGGTGGCGCATACGGCGGCGCGTCAGGTCGTGGAGCTGGGTATTCAAGGCGTCTGGTTGGAGGAGACGCCGATGTCGTTGGAGGAGGTC
TATTGCAATGAAATTTTGGACAACCAAGGAGAGAGGTTGTGTTTCTTGTTTGAGGGTTCTGTTTAG
Protein sequenceShow/hide protein sequence
MSADCFENLLFWAGGCGIGGIRGLLVEGIWEGDGNGWLWVSEYLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKL
VSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEV
YCNEILDNQGERLCFLFEGSV