; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009410 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009410
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRING-H2 finger protein ATL18-like
Genome locationchr9:39014446..39014901
RNA-Seq ExpressionLag0009410
SyntenyLag0009410
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604984.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. sororia]4.9e-4972.73Show/hide
Query:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL
        A+ FF T++WIPL RLK+AI+  +SVFRLA +PE D   GG LLVRRY EL+RSDDRA     EEE+CSICL EFAR DSVC LPDCSHVFHF+CIEKWL
Subjt:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL

Query:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        ERN FTCPLCRC  FFNI NRHE+ +  FVVPDNPSCLYYFLQ
Subjt:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ

KAG7010790.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-5877.27Show/hide
Query:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC
        MLGLIFLNS +  A+IFF TF+WIPLFR+KEAIL + SVFRLASLPE+D   GG LLVRRY EL+RSDDR     EEEEMCSICLTEFAREDSVC+LPDC
Subjt:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC

Query:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        +HVFHF+CIEKW ERN FTCPLCRCFFNIE  HEK +  FVVPDNPS LYYFLQ
Subjt:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ

XP_022944066.1 RING-H2 finger protein ATL18-like [Cucurbita moschata]2.0e-5877.92Show/hide
Query:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC
        MLGLIFLNS +  A+IFF TF+WIPLFR+KEAIL V SVFRL SLPE+D   GG LLVRRY EL+RSDDRA    EEEEMCSICLTEFAREDSVC+LPDC
Subjt:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC

Query:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        +HVFHF+CIEKW ERN FTCPLCRCFFNIE  HEK +  FVVPDNPS LYYFLQ
Subjt:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ

XP_022947864.1 E3 ubiquitin-protein ligase ATL41-like, partial [Cucurbita moschata]4.9e-4972.73Show/hide
Query:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL
        A+ FF T++WIPL RLK+AI+  +SVFRLA +PE D   GG LLVRRY EL+RSDDRA     EEE+CSICL EFAR DSVC LPDCSHVFHF+CIEKWL
Subjt:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL

Query:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        ERN FTCPLCRC  FFNI NRHE+ +  FVVPDNPSCLYYFLQ
Subjt:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ

XP_023512248.1 RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]4.4e-5877.27Show/hide
Query:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC
        MLGLIFLNS +  A+IFF TF+WIPLFR+KEAIL V SVFRLASLPE+D   GG LLVRRY EL+RSDDR     EEEEMCSICLTEFAREDSVC+LPDC
Subjt:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC

Query:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        +HVFHF+CIEKW ERN FTCPLCRCFFNIE  HE+ +  FVVPDNPS LYYFLQ
Subjt:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ

TrEMBL top hitse value%identityAlignment
A0A5A7TXY0 RING-H2 finger protein ATL18-like9.9e-4056.86Show/hide
Query:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVL-SVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAR-EDSVCELPDCS
        MLGL +L SP+RF ++FF TFLWIPLFR+K+AIL V+ +VF L S P+     ++VR Y E        +     EE+CSICLTEF R EDSVC+LP+C 
Subjt:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVL-SVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAR-EDSVCELPDCS

Query:  HVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        H+FHFNCI++W++RN FTCPLCRCFF  +N     ++ F+VPDNPS LYYFLQ
Subjt:  HVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ

A0A6J1CHK3 RING-H2 finger protein ATL641.2e-4266.67Show/hide
Query:  LRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL
        +R  +IF Y  + IPLF LK+AILS+ +VFR +S P         RRY ELRR +D      E+E MCSICLTEFAR+DSV ELPDC+HVFH NCIEKW+
Subjt:  LRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL

Query:  ERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        ERN+FTCPLCRCFFNIENR EKLR  FV+PDNPSCLYYFLQ
Subjt:  ERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ

A0A6J1FTE6 RING-H2 finger protein ATL18-like9.5e-5977.92Show/hide
Query:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC
        MLGLIFLNS +  A+IFF TF+WIPLFR+KEAIL V SVFRL SLPE+D   GG LLVRRY EL+RSDDRA    EEEEMCSICLTEFAREDSVC+LPDC
Subjt:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDC

Query:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        +HVFHF+CIEKW ERN FTCPLCRCFFNIE  HEK +  FVVPDNPS LYYFLQ
Subjt:  SHVFHFNCIEKWLERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ

A0A6J1G855 E3 ubiquitin-protein ligase ATL41-like2.3e-4972.73Show/hide
Query:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL
        A+ FF T++WIPL RLK+AI+  +SVFRLA +PE D   GG LLVRRY EL+RSDDRA     EEE+CSICL EFAR DSVC LPDCSHVFHF+CIEKWL
Subjt:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL

Query:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        ERN FTCPLCRC  FFNI NRHE+ +  FVVPDNPSCLYYFLQ
Subjt:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ

A0A6J1I5X8 RING-H2 finger protein ATL182.4e-4670.63Show/hide
Query:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL
        + IFF T++WIPL RLK+AI+  +SVFRLA +PE D   GG LLVRRY EL+R  DRA     EEE+CSICL EFAR DSVC L DCSHVFHF+CIEKWL
Subjt:  AVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELD---GGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL

Query:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ
        ERN FTCPLCRC  FFNI NRHE+ +  FVVPDNPSCLYYFLQ
Subjt:  ERNHFTCPLCRC--FFNIENRHEKLRFSFVVPDNPSCLYYFLQ

SwissProt top hitse value%identityAlignment
Q8GW38 RING-H2 finger protein ATL473.0e-0945.9Show/hide
Query:  CSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR-CFFNIENRHEKLRFSF
        C++CL EF+ +D +  LP+CSH FH +CI+ WL  N  TCPLCR   F++ ++ E   F+F
Subjt:  CSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR-CFFNIENRHEKLRFSF

Q940Q4 RING-H2 finger protein ATL135.1e-0946.03Show/hide
Query:  CSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR-CFFNIENRHEKLRFSFVV
        C++CL EF  ED +  LP CSH FH +CI+ WL  +H TCPLCR    +  + H+  R SF++
Subjt:  CSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR-CFFNIENRHEKLRFSFVV

Q9FL07 RING-H2 finger protein ATL465.1e-0956.82Show/hide
Query:  CSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR
        C++CL EF+ +D +  LP CSH FH NCI+ WL+ N  TCPLCR
Subjt:  CSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR

Q9LSW9 RING-H2 finger protein ATL166.0e-1033.33Show/hide
Query:  LKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR
        L E+++  + +F+     + + G            + +  EEEE+  + CS+CL+EF  E+ +  +P+CSH+FH +CI+ WL+ N+  CPLCR
Subjt:  LKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR

Q9SZL4 RING-H2 finger protein ATL181.7e-1742.03Show/hide
Query:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHV
        M+ ++F  SPL  A I FYT + IPL RLK+           A   + DG  L+   +G         ++E+EEE  C ICL EF  ED+V  LP C+H+
Subjt:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHV

Query:  FHFNCIEKWLERNHFTCPLCRCFF--------NIENRH
        FH NCIE WL R H TCPLCR F         N+ N H
Subjt:  FHFNCIEKWLERNHFTCPLCRCFF--------NIENRH

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein1.2e-1050.94Show/hide
Query:  EEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR
        EEEEE+   C +CL  F  E+ V EL  C H FH  C++ W   NH TCPLCR
Subjt:  EEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR

AT3G28620.1 Zinc finger, C3HC4 type (RING finger) family protein5.1e-1250.94Show/hide
Query:  EEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR
        +EEEEE + C+ICL    R +  CE+P CSH FH  C+ +WL R++ +CPLCR
Subjt:  EEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR

AT4G38140.1 RING/U-box superfamily protein1.2e-1842.03Show/hide
Query:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHV
        M+ ++F  SPL  A I FYT + IPL RLK+           A   + DG  L+   +G         ++E+EEE  C ICL EF  ED+V  LP C+H+
Subjt:  MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHV

Query:  FHFNCIEKWLERNHFTCPLCRCFF--------NIENRH
        FH NCIE WL R H TCPLCR F         N+ N H
Subjt:  FHFNCIEKWLERNHFTCPLCRCFF--------NIENRH

AT5G43200.1 Zinc finger, C3HC4 type (RING finger) family protein1.1e-1148.21Show/hide
Query:  DRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR
        + ++ EEEE + C+ICL E +  D  CELP+C+H FH  C+ +WL R + +CPLCR
Subjt:  DRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR

AT5G43420.1 RING/U-box superfamily protein4.3e-1133.33Show/hide
Query:  LKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR
        L E+++  + +F+     + + G            + +  EEEE+  + CS+CL+EF  E+ +  +P+CSH+FH +CI+ WL+ N+  CPLCR
Subjt:  LKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWLERNHFTCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGGTTTGATTTTTCTAAATTCGCCTTTGCGATTCGCTGTCATTTTCTTCTACACTTTCCTATGGATCCCGCTGTTTCGTCTCAAGGAAGCGATTCTTAGCGTCCT
TAGTGTTTTCCGCCTCGCATCTCTGCCGGAACTCGACGGCGGAGCTCTGCTGGTGAGAAGATACGGTGAGTTGCGGAGGAGCGACGATCGAGCGGAGGAGGAGGAGGAGG
AGGAGGAGATGTGCTCCATCTGTTTGACGGAATTCGCGAGAGAAGATTCCGTGTGCGAATTGCCGGATTGTTCGCACGTTTTTCATTTCAATTGCATCGAGAAGTGGCTC
GAGAGGAATCACTTCACTTGCCCGCTCTGTAGGTGCTTCTTCAACATCGAGAATCGCCATGAGAAGCTTCGCTTCAGCTTCGTCGTTCCAGATAATCCTTCTTGCCTGTA
TTATTTCTTGCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGGTTTGATTTTTCTAAATTCGCCTTTGCGATTCGCTGTCATTTTCTTCTACACTTTCCTATGGATCCCGCTGTTTCGTCTCAAGGAAGCGATTCTTAGCGTCCT
TAGTGTTTTCCGCCTCGCATCTCTGCCGGAACTCGACGGCGGAGCTCTGCTGGTGAGAAGATACGGTGAGTTGCGGAGGAGCGACGATCGAGCGGAGGAGGAGGAGGAGG
AGGAGGAGATGTGCTCCATCTGTTTGACGGAATTCGCGAGAGAAGATTCCGTGTGCGAATTGCCGGATTGTTCGCACGTTTTTCATTTCAATTGCATCGAGAAGTGGCTC
GAGAGGAATCACTTCACTTGCCCGCTCTGTAGGTGCTTCTTCAACATCGAGAATCGCCATGAGAAGCTTCGCTTCAGCTTCGTCGTTCCAGATAATCCTTCTTGCCTGTA
TTATTTCTTGCAGTGA
Protein sequenceShow/hide protein sequence
MLGLIFLNSPLRFAVIFFYTFLWIPLFRLKEAILSVLSVFRLASLPELDGGALLVRRYGELRRSDDRAEEEEEEEEMCSICLTEFAREDSVCELPDCSHVFHFNCIEKWL
ERNHFTCPLCRCFFNIENRHEKLRFSFVVPDNPSCLYYFLQ