; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009432 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009432
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRPM1-interacting protein 4 (RIN4) family protein
Genome locationchr9:39226746..39228020
RNA-Seq ExpressionLag0009432
SyntenyLag0009432
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010787.1 hypothetical protein SDJN02_27583, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-3275.79Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPD--------QRVAYLVKNGFAACKLRNHEAFR
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP YK+G+VLGKPQP         + +  ++KNGFAACKL+N EAFR
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPD--------QRVAYLVKNGFAACKLRNHEAFR
XP_022140725.1 RPM1-interacting protein 4 [Momordica charantia]5.6e-2796.83Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQ
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP YKHGAVLGKPQ
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQ
XP_022943908.1 RPM1-interacting protein 4-like [Cucurbita moschata]8.2e-2690.62Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP YK+G+VLGKPQP
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
XP_022947539.1 uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata]5.6e-2795.31Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QP
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
XP_022947540.1 uncharacterized protein LOC111451376 isoform X2 [Cucurbita moschata]7.4e-2796.83Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QP
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
TrEMBL top hitse value%identityAlignment
A0A6J1CFY0 RPM1-interacting protein 42.7e-2796.83Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQ
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP YKHGAVLGKPQ
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQ
A0A6J1G736 uncharacterized protein LOC111451376 isoform X12.7e-2795.31Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QP
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
A0A6J1G769 uncharacterized protein LOC111451376 isoform X23.6e-2796.83Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QP
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
A0A6J1I4X6 uncharacterized protein LOC111469905 isoform X23.6e-2796.83Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QP
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
A0A6J1I7R1 uncharacterized protein LOC111469905 isoform X12.7e-2795.31Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QP
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQP
SwissProt top hitse value%identityAlignment
O22633 Protein NOI42.7e-1668.18Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQP
        S+KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQP
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQP
Q8GYN5 RPM1-interacting protein 42.2e-0559.38Show/hide
Query:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
        +PKFG+WD N+P+SA+G+T IFNK R E+ +G
Subjt:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein7.1e-2080.36Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY-KHGAVLGKP
        PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y K+G VL KP
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY-KHGAVLGKP
AT5G40645.1 RPM1-interacting protein 4 (RIN4) family protein2.7e-1190.62Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKT
        PLPKFGEWDVNDPASAEGFTVIF KAR++KKT
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKT
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein1.8e-1864.38Show/hide
Query:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPDQRVAYL
        S+KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQP +++A L
Subjt:  SEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPDQRVAYL
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein3.9e-1866.67Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPDQRVAYL
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQP +++A L
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPDQRVAYL
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein4.3e-1771.19Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQP
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQP
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGAGGAATTGGGTGAAAATCTCATGTACGATTCTGTGGAGTGTGTTGTATATAGGTCAGGAATGGATGTTGTTTCTAGTGAAAAAGGCAGTAGCAGTCCATTGCC
AAAGTTCGGCGAATGGGATGTCAACGACCCCGCATCCGCTGAGGGATTCACAGTCATCTTTAATAAAGCCAGGAATGAGAAGAAGACTGGCGGCTTGCCTGACTCTCCAG
CAAAGGATGACCCCGCGTACAAGCATGGAGCTGTCCTTGGAAAGCCTCAGCCTGACCAAAGAGTGGCCTATTTAGTAAAAAATGGTTTTGCTGCTTGCAAGCTGCGGAAT
CATGAGGCTTTTCGGGGATCGATAACGGGGTTCAGCAGAAATGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGAGGAATTGGGTGAAAATCTCATGTACGATTCTGTGGAGTGTGTTGTATATAGGTCAGGAATGGATGTTGTTTCTAGTGAAAAAGGCAGTAGCAGTCCATTGCC
AAAGTTCGGCGAATGGGATGTCAACGACCCCGCATCCGCTGAGGGATTCACAGTCATCTTTAATAAAGCCAGGAATGAGAAGAAGACTGGCGGCTTGCCTGACTCTCCAG
CAAAGGATGACCCCGCGTACAAGCATGGAGCTGTCCTTGGAAAGCCTCAGCCTGACCAAAGAGTGGCCTATTTAGTAAAAAATGGTTTTGCTGCTTGCAAGCTGCGGAAT
CATGAGGCTTTTCGGGGATCGATAACGGGGTTCAGCAGAAATGTATAA
Protein sequenceShow/hide protein sequence
MSEELGENLMYDSVECVVYRSGMDVVSSEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPDQRVAYLVKNGFAACKLRN
HEAFRGSITGFSRNV