CuGenDBv2

Gene ID	Lag0009446
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	F-box protein SNE-like
Genome location	chr9:39343870..39344328
RNA-Seq Expression	Lag0009446
Synteny	Lag0009446
Gene Ontology terms	GO:0009937 - regulation of gibberellic acid mediated signaling pathway (biological process) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR044184 - F-box protein SNE

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0060791.1 F-box protein SNE [Cucumis melo var. makuwa]

2.5e-77

95.39

Show/hide

Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPE NEK+RKFLINDNLDILIEILKRLDGPSLGVA CVCRLWCTIARSESVWE+VCFRHV SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR+GGDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

XP_004140002.1 F-box protein SNE [Cucumis sativus]

3.8e-78

96.05

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Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVA CVCRLWCTIARSESVWE+VCFRHV SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR+GG+ASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

XP_016903159.1 PREDICTED: F-box protein SNE [Cucumis melo]

9.4e-77

94.74

Show/hide

Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPE NEK+RKFLIND+LDILIEILKRLDGPSLGVA CVCRLWCTIARSESVWE+VCFRHV SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR+GGDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

XP_022947535.1 F-box protein SNE-like [Cucurbita moschata]

2.5e-77

96.05

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Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPE NEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIAR+ESVWE VCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        S++VRRVWTQDEVQLSLSLFCVDYYERLTGSGRL GDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

XP_038902594.1 F-box protein SNE [Benincasa hispida]

1.2e-79

98.03

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Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVA CVCRLWCTIARSESVWE+VCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR+GGDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KAT5 F-box domain-containing protein

1.9e-78

96.05

Show/hide

Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVA CVCRLWCTIARSESVWE+VCFRHV SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR+GG+ASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

A0A1S4E4K7 F-box protein SNE

4.6e-77

94.74

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Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPE NEK+RKFLIND+LDILIEILKRLDGPSLGVA CVCRLWCTIARSESVWE+VCFRHV SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR+GGDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

A0A5A7V4V6 F-box protein SNE

1.2e-77

95.39

Show/hide

Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPE NEK+RKFLINDNLDILIEILKRLDGPSLGVA CVCRLWCTIARSESVWE+VCFRHV SPLPSSVK+VVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGR+GGDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

A0A6J1G764 F-box protein SNE-like

1.2e-77

96.05

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Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPE NEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIAR+ESVWE VCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        S++VRRVWTQDEVQLSLSLFCVDYYERLTGSGRL GDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

A0A6J1I140 F-box protein SNE-like

1.2e-77

96.05

Show/hide

Query:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
        MQKNHIPE NEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIAR+ESVWE VCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY
Subjt:  MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGY

Query:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
        S++VRRVWTQDEVQLSLSLFCVDYYERLTGSGRL GDASALSLMFLCNTVNV
Subjt:  SDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

SwissProt top hits

e value

%identity

Alignment

Q7XAK4 F-box protein GID2

9.4e-11

34.78

Show/hide

Query:  DILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSP--LPSSVKSVVAALGGYKRLYMVSIRP-------VLSRLGYSDLVRRVWTQDEV
        D++ E+L+R +  +L  AACV R W  +A  E +WE  C R   +       +++VV +LGG++RL+ V IRP       V  + G      R+  +D+V
Subjt:  DILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSP--LPSSVKSVVAALGGYKRLYMVSIRP-------VLSRLGYSDLVRRVWTQDEV

Query:  QLSLSLFCVDYYERL
        QLSLSLF + +++ +
Subjt:  QLSLSLFCVDYYERL

Q9LUB6 F-box protein SNE

2.9e-36

55.19

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Query:  IPEPNEKRRK------FLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPS-SVKSVVAALGGYKRLYMVSIRPVLSRL
        + + N KR++      F IND+ D+L+EIL+RLDG SL  AACVCRLW  +AR++S+WEE+CFR V SP PS S++SVV+ALGGY+ LY + IRPVL+R 
Subjt:  IPEPNEKRRK------FLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPS-SVKSVVAALGGYKRLYMVSIRPVLSRL

Query:  GYSDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
            L + +WT+D++QLSLSL+CV YYERL     L GDA   SL+FL   VNV
Subjt:  GYSDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

Q9STX3 F-box protein GID2

1.7e-12

35.9

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Query:  NLD--ILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTS--PLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLS
        NLD  ++ E+LK +D  +L +++CV ++W   A+ E +WE +C RH T+     + ++SVV ALGG++RL+ + + P LS+       R  + +DE++L+
Subjt:  NLD--ILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTS--PLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLS

Query:  LSLFCVDYYERLTGSGR
        LSL  + YYE+++ + R
Subjt:  LSLFCVDYYERLTGSGR

Arabidopsis top hits

e value

%identity

Alignment

AT4G24210.1 F-box family protein

1.2e-13

35.9

Show/hide

Query:  NLD--ILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTS--PLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLS
        NLD  ++ E+LK +D  +L +++CV ++W   A+ E +WE +C RH T+     + ++SVV ALGG++RL+ + + P LS+       R  + +DE++L+
Subjt:  NLD--ILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTS--PLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQDEVQLS

Query:  LSLFCVDYYERLTGSGR
        LSL  + YYE+++ + R
Subjt:  LSLFCVDYYERLTGSGR

AT5G48170.1 F-box family protein

2.1e-37

55.19

Show/hide

Query:  IPEPNEKRRK------FLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPS-SVKSVVAALGGYKRLYMVSIRPVLSRL
        + + N KR++      F IND+ D+L+EIL+RLDG SL  AACVCRLW  +AR++S+WEE+CFR V SP PS S++SVV+ALGGY+ LY + IRPVL+R 
Subjt:  IPEPNEKRRK------FLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPS-SVKSVVAALGGYKRLYMVSIRPVLSRL

Query:  GYSDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV
            L + +WT+D++QLSLSL+CV YYERL     L GDA   SL+FL   VNV
Subjt:  GYSDLVRRVWTQDEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCAGAAGAATCACATACCTGAGCCGAACGAGAAGCGGCGGAAGTTCTTAATCAACGACAATCTCGACATTCTCATCGAAATCCTCAAGCGGCTGGACGGACCGTCGCT
CGGCGTCGCGGCCTGTGTCTGCCGGCTCTGGTGCACGATCGCTCGAAGCGAATCGGTATGGGAAGAGGTCTGCTTCCGGCACGTGACGTCGCCGCTTCCGTCGTCGGTGA
AATCGGTGGTGGCCGCCCTGGGAGGGTACAAGCGGCTGTACATGGTGAGCATACGGCCGGTGCTGAGTCGACTCGGGTACTCGGACCTGGTGAGGCGAGTTTGGACTCAG
GACGAGGTTCAACTATCGCTGTCTCTGTTCTGTGTGGATTATTACGAGCGGCTCACCGGCAGTGGGAGACTCGGCGGCGATGCGTCCGCATTGTCGCTCATGTTTCTCTG
CAACACTGTGAACGTCTGA

mRNA sequence

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Protein sequence

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MQKNHIPEPNEKRRKFLINDNLDILIEILKRLDGPSLGVAACVCRLWCTIARSESVWEEVCFRHVTSPLPSSVKSVVAALGGYKRLYMVSIRPVLSRLGYSDLVRRVWTQ
DEVQLSLSLFCVDYYERLTGSGRLGGDASALSLMFLCNTVNV

Lag0009446 (gene) of Sponge gourd (AG-4) v1 genome