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Lag0009456 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009456
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr9:39443209..39443741
RNA-Seq ExpressionLag0009456
SyntenyLag0009456
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]2.0e-0424.5Show/hide
Query:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK------------------------------------VEFDVVEVI
        KD    RR    +   WK    N WKLNT+ +W    N GGI W++ D  G ++K                                    +E D +E I
Subjt:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK------------------------------------VEFDVVEVI

Query:  NIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI
        ++++   +D TE+  ++E I  +   +  V+  H  R +N   H +A+ A+
Subjt:  NIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI

XP_022148549.1 uncharacterized protein LOC111017181 [Momordica charantia]4.6e-0630.23Show/hide
Query:  RNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSM--------------------LKVEFDVVEVINIINGVSEDLTELKNIMEAIALIA
        +N    V W     + WKLN D +W++  + GG+ W+V DS G                      +++E D +EV+NIIN  S  LTE+  I+E I    
Subjt:  RNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSM--------------------LKVEFDVVEVINIINGVSEDLTELKNIMEAIALIA

Query:  STLNFVAFHHYKRSSNTTTHCVAQLAIFF
         +L    F H    +N   H +A+ A  F
Subjt:  STLNFVAFHHYKRSSNTTTHCVAQLAIFF

XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]5.7e-0423.9Show/hide
Query:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK--------------------------------------------V
        KD    RR    +   WK    N WKLNTD +W    N GGI W++ D  G ++K                                            +
Subjt:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK--------------------------------------------V

Query:  EFDVVEVINIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI
        E D +E I++++   +D TE+  ++E I  +   +  V+  H  R +N   H +A+ A+
Subjt:  EFDVVEVINIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI

TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134129.4e-0524.5Show/hide
Query:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK------------------------------------VEFDVVEVI
        KD    RR    +   WK    N WKLNT+ +W    N GGI W++ D  G ++K                                    +E D +E I
Subjt:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK------------------------------------VEFDVVEVI

Query:  NIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI
        ++++   +D TE+  ++E I  +   +  V+  H  R +N   H +A+ A+
Subjt:  NIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI

A0A6J1D4B6 uncharacterized protein LOC1110171812.2e-0630.23Show/hide
Query:  RNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSM--------------------LKVEFDVVEVINIINGVSEDLTELKNIMEAIALIA
        +N    V W     + WKLN D +W++  + GG+ W+V DS G                      +++E D +EV+NIIN  S  LTE+  I+E I    
Subjt:  RNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSM--------------------LKVEFDVVEVINIINGVSEDLTELKNIMEAIALIA

Query:  STLNFVAFHHYKRSSNTTTHCVAQLAIFF
         +L    F H    +N   H +A+ A  F
Subjt:  STLNFVAFHHYKRSSNTTTHCVAQLAIFF

A0A6J1DSV1 uncharacterized protein LOC1110236082.7e-0423.9Show/hide
Query:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK--------------------------------------------V
        KD    RR    +   WK    N WKLNTD +W    N GGI W++ D  G ++K                                            +
Subjt:  KDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLK--------------------------------------------V

Query:  EFDVVEVINIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI
        E D +E I++++   +D TE+  ++E I  +   +  V+  H  R +N   H +A+ A+
Subjt:  EFDVVEVINIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHCVAQLAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGACCAAGATCCCACCAGACGGAGGAATCAAGCGAGTCATGTTCCATGGAAAAGACTCAATCCGAATCACTGGAAGCTGAATACGGACACATCTTGGATCGAAGG
CGCTAATTGTGGCGGAATCAGGTGGGTGGTGCATGACTCGAATGGATCCATGCTGAAGGTTGAATTTGACGTCGTGGAGGTGATAAACATCATTAATGGTGTTTCCGAAG
ATCTTACGGAGCTGAAGAATATCATGGAAGCCATTGCTTTAATAGCTTCAACGCTTAATTTTGTTGCTTTTCACCATTACAAGAGGAGCTCCAACACAACAACCCACTGT
GTTGCTCAACTTGCCATATTCTTTTCTTTTGAATCGAAAAGAGGACCTCCCCTACACGGAAGAAGGGCGATCTTTTTAGGCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGACCAAGATCCCACCAGACGGAGGAATCAAGCGAGTCATGTTCCATGGAAAAGACTCAATCCGAATCACTGGAAGCTGAATACGGACACATCTTGGATCGAAGG
CGCTAATTGTGGCGGAATCAGGTGGGTGGTGCATGACTCGAATGGATCCATGCTGAAGGTTGAATTTGACGTCGTGGAGGTGATAAACATCATTAATGGTGTTTCCGAAG
ATCTTACGGAGCTGAAGAATATCATGGAAGCCATTGCTTTAATAGCTTCAACGCTTAATTTTGTTGCTTTTCACCATTACAAGAGGAGCTCCAACACAACAACCCACTGT
GTTGCTCAACTTGCCATATTCTTTTCTTTTGAATCGAAAAGAGGACCTCCCCTACACGGAAGAAGGGCGATCTTTTTAGGCTCCTAG
Protein sequenceShow/hide protein sequence
MKDQDPTRRRNQASHVPWKRLNPNHWKLNTDTSWIEGANCGGIRWVVHDSNGSMLKVEFDVVEVINIINGVSEDLTELKNIMEAIALIASTLNFVAFHHYKRSSNTTTHC
VAQLAIFFSFESKRGPPLHGRRAIFLGS