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Lag0009485 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009485
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationchr9:39605685..39606596
RNA-Seq ExpressionLag0009485
SyntenyLag0009485
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96204.1 nuclear cap-binding protein subunit 2 [Cucumis melo var. makuwa]8.7e-4995.5Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]6.6e-4995.5Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG+RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]8.7e-4995.5Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]3.3e-4893.69Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+GHRHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]5.6e-4896.36Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDH+SRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQR
        EEDDDD+KQR
Subjt:  EEDDDDRKQR
TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 23.2e-4995.5Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGKHGGSHGHG+RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
A0A1S3CLT9 Nuclear cap-binding protein subunit 24.2e-4995.5Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
A0A5D3BB82 Nuclear cap-binding protein subunit 24.2e-4995.5Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
A0A6J1CIF4 Nuclear cap-binding protein subunit 23.0e-4794.55Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGS+ PV+PQYGKHGG HGHGHRHGRDY HRKRYRDDD HAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQR
        EEDDDDRKQR
Subjt:  EEDDDDRKQR
A0A6J1J7C7 Nuclear cap-binding protein subunit 21.6e-4893.69Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
        GGYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGKHGGSHG+GHRHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSD
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD

Query:  EEDDDDRKQRH
        EEDDDDRKQRH
Subjt:  EEDDDDRKQRH
SwissProt top hitse value%identityAlignment
Q84L14 Nuclear cap-binding protein subunit 22.5e-1455.75Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYGKHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESG
        GGYGK+VQKELEAQR+LVDYG    G+ QP   PQY +     G+G  +R+ RDY  RKRYR+D+R    SS+R  D E +R+       EKNPRFRE G
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYGKHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESG

Query:  DSDEEDDDDRKQR
        DSDEEDDD  K+R
Subjt:  DSDEEDDDDRKQR
Q9XFD1 Nuclear cap-binding protein subunit 23.3e-2763.79Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFR
        GGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFR
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFR

Query:  ESGDSDEEDDDDRKQR
        ESGDSD++ +DDRK+R
Subjt:  ESGDSDEEDDDDRKQR
Arabidopsis top hitse value%identityAlignment
AT5G44200.1 CAP-binding protein 202.4e-2863.79Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFR
        GGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFR
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFR

Query:  ESGDSDEEDDDDRKQR
        ESGDSD++ +DDRK+R
Subjt:  ESGDSDEEDDDDRKQR
AT5G44200.2 CAP-binding protein 202.4e-2863.79Show/hide
Query:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFR
        GGYGKLVQKELEAQRQLVDYGTGSLG+     P  YG   + GG++G G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFR
Subjt:  GGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFR

Query:  ESGDSDEEDDDDRKQR
        ESGDSD++ +DDRK+R
Subjt:  ESGDSDEEDDDDRKQR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATGTGACACACATCTCAAACTTTTAGGTGGCTATGGAAAGCTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTC
TATGCAGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGAAGAGATTACCACCACCGCAAGCGCTACCGAGATGATGATCGCC
ATGCCCACGAGAGCTCTAAGAGAACTTCAGATTATGAGTCTAGAAGAAACCCCGATCATGAATCCAGACCGGAGAAGAATCCAAGGTTCCGGGAGAGTGGTGATTCTGAC
GAAGAGGATGATGATGACCGAAAGCAGCGACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCATGTGACACACATCTCAAACTTTTAGGTGGCTATGGAAAGCTAGTTCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTC
TATGCAGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGAAGAGATTACCACCACCGCAAGCGCTACCGAGATGATGATCGCC
ATGCCCACGAGAGCTCTAAGAGAACTTCAGATTATGAGTCTAGAAGAAACCCCGATCATGAATCCAGACCGGAGAAGAATCCAAGGTTCCGGGAGAGTGGTGATTCTGAC
GAAGAGGATGATGATGACCGAAAGCAGCGACATTAA
Protein sequenceShow/hide protein sequence
MPCDTHLKLLGGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSD
EEDDDDRKQRH