; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009492 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009492
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:39688131..39689244
RNA-Seq ExpressionLag0009492
SyntenyLag0009492
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.2e-4734.2Show/hide
Query:  EDRLIWHFEENDPFSVRSRYRLA-LKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVF
        EDRLIW++E+   +SVRS Y++A L       PSSS   + R WW+  WK+++P+K+K+FLWRL  +RLPT  NL KRG+++TN C  C  + ED +H+F
Subjt:  EDRLIWHFEENDPFSVRSRYRLA-LKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVF

Query:  WKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNE-----RDLFDWASVYLSSFQQAASSNGAVVAV
        W C   +++W+ SKF  L       +   +L    E L   DFE + V  W +WN  NA  +N S         +L +WA+ Y   F++A S+       
Subjt:  WKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNE-----RDLFDWASVYLSSFQQAASSNGAVVAV

Query:  VEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMG---------------FR
           G+   T   +W+P D    K+N DA         G G ++ N RG+V  +A   L N  +VD AEA A ++G+Q A ++G                +
Subjt:  VEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMG---------------FR

Query:  WFSVETDSL--------RKGNMTAHVMTSLAFTYANF-VWLEEWPSEV
          +  T SL        R+GN  AH++   A     F +W+E+WP E+
Subjt:  WFSVETDSL--------RKGNMTAHVMTSLAFTYANF-VWLEEWPSEV

XP_023904177.1 uncharacterized protein LOC112015942 [Quercus suber]2.8e-3332.3Show/hide
Query:  VEDRLIWHFEENDPFSVRSRYRLALK-LKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV
        V+D +IW   +N  +SV+S Y +A + L+S+     S     +  W +LWK+N+P+K+K+F WR  +  LPT+ NL KR I     C IC  S E+ +HV
Subjt:  VEDRLIWHFEENDPFSVRSRYRLALK-LKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV

Query:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNERDLFDWASV-YLSSFQQAASSNGAVVAVVED
         W+C V + +W GS+       +  P+   +   +  +L   D  + +V  W++W+  N+VL  G + E    +   V +L  F Q       +      
Subjt:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNERDLFDWASV-YLSSFQQAASSNGAVVAVVED

Query:  GQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL
         Q R TV  VWRP      K+N DA +  + G  G GAV+RN  GEV  +     P+  + D AE  A  K ++ A   GF    +E DS+
Subjt:  GQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL

XP_023908235.1 uncharacterized protein LOC112019924 [Quercus suber]9.0e-3228.76Show/hide
Query:  VEDRLIWHFEENDPFSVRSRYRLA--LKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLH
        V D + W F ++  F+V+S Y++A  L  K     SSS     RV W +LWKL +P+K+K+F WR   + LPT+ NL K+ I V +LC +C  + E  +H
Subjt:  VEDRLIWHFEENDPFSVRSRYRLA--LKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLH

Query:  VFWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNERDLFDWASV-YLSSFQQAASSNGAVVAVVE
          W+C++ + +W GS  A         +F  +L  + ++L   + E  +V  W++WN  N VL+ G + E    +  +V  +  FQQ+ +S      +  
Subjt:  VFWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNERDLFDWASV-YLSSFQQAASSNGAVVAVVE

Query:  DGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL--------
        + Q   T    W P      KLN DA V     + G GAV+RN+ G+V  +     P     + AE  A  K ++ A   GF    VE DS+        
Subjt:  DGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL--------

Query:  -------------------------------RKGNMTAHVMTSLAFTY-ANFVWLEEWPSEVTDVICREVSL
                                       R GN  A V+   A+    +  W+EE PS   + +  + SL
Subjt:  -------------------------------RKGNMTAHVMTSLAFTY-ANFVWLEEWPSEVTDVICREVSL

XP_024956542.1 uncharacterized protein LOC112498908 [Citrus sinensis]4.1e-3231.03Show/hide
Query:  LVEDRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV
        L ED LIWHF ++  ++V+S Y+ ALK++   +PSSS+ ++    W+ +W L LP K+++F+WR A+N LP+ +NL KR I     C +C   +E+  H 
Subjt:  LVEDRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV

Query:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGS-VNERDLFDWASVYLSSFQQAASSNGAVVAVVED
           C   K +W  S F     +  G +   +L  VK      D ++  V  W  WN  N  L+ G   N + +   A   + ++++   S     A V  
Subjt:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGS-VNERDLFDWASVYLSSFQQAASSNGAVVAVVED

Query:  GQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS
        G+ +      W P     +K+N DA    E    G GAV+R+  G+V  +A        +V +AEA AM  G+Q A+    +   +E+DS
Subjt:  GQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS

XP_030941688.1 uncharacterized protein LOC115966628 [Quercus lobata]1.2e-3634.35Show/hide
Query:  VEDRLIWHFEENDPFSVRSRYRLALK-LKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV
        V D L+W   ++  +SVRS Y LA + L+S      S    GR  W  LWKL +P+K+K++ WR  ++ LPT+ NL +R I     C +C ++LE  +H 
Subjt:  VEDRLIWHFEENDPFSVRSRYRLALK-LKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV

Query:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKE---KLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNE-RDLFDWASVYLSSFQQAASSNGAVVAV
         W+C V + +W GS    L     G  +D VL    E   +L   +FE+ +   WV+WN  NAV+  G + +   L   A VYL  ++QA          
Subjt:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKE---KLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNE-RDLFDWASVYLSSFQQAASSNGAVVAV

Query:  VEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL
             SR      W+P  +D  KLN DA +  E G  G GA++RN RGEV  +     P  WN + AEA A  + ++ A   GF    +E D++
Subjt:  VEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL

TrEMBL top hitse value%identityAlignment
A0A2N9F1N7 Uncharacterized protein6.1e-3431.69Show/hide
Query:  DRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWK
        D ++W    N  FS RS Y+L    KS    S+SD ++   +W SLW + +P+K+K+F+WR  ++ LPTK NL  RG+  +  C +CH   E   H  W 
Subjt:  DRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWK

Query:  CSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVW-NLHNAVLWNGSVNERDLFDWASVYLSSFQQAASSNGAVVAVVEDGQS
        C   +++W  S    L++S+   N++ V+  V       D E      W++W N +NA L   S +   L + A+ Y+  + +       V   VED  S
Subjt:  CSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVW-NLHNAVLWNGSVNERDLFDWASVYLSSFQQAASSNGAVVAVVEDGQS

Query:  RGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVE
        R  +   W P     LK+N+         +VG G V+RN+RGE   S C   P+  +   + A AM+K +Q     GF    VE
Subjt:  RGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVE

A0A2N9IZ42 Reverse transcriptase domain-containing protein6.1e-3431.69Show/hide
Query:  DRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWK
        D ++W    N  FS RS Y+L    KS    S+SD ++   +W SLW + +P+K+K+F+WR  ++ LPTK NL  RG+  +  C +CH   E   H  W 
Subjt:  DRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWK

Query:  CSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVW-NLHNAVLWNGSVNERDLFDWASVYLSSFQQAASSNGAVVAVVEDGQS
        C   +++W  S    L++S+   N++ V+  V       D E      W++W N +NA L   S +   L + A+ Y+  + +       V   VED  S
Subjt:  CSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVW-NLHNAVLWNGSVNERDLFDWASVYLSSFQQAASSNGAVVAVVEDGQS

Query:  RGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVE
        R  +   W P     LK+N+         +VG G V+RN+RGE   S C   P+  +   + A AM+K +Q     GF    VE
Subjt:  RGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVE

A0A5B7BI33 Uncharacterized protein (Fragment)3.0e-3330.46Show/hide
Query:  DRLIWHFEENDPFSVRSRYRLALKL----KSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLH
        DRLIWHF +N  +SV+S Y LA  L    K+     SS M      W  LW L+LP+K+K  +WR A N LPT   L+ R + V  LC +C +  E  LH
Subjt:  DRLIWHFEENDPFSVRSRYRLALKL----KSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLH

Query:  VFWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWN--GSVNERDLFDWASVYLSSFQQAASSNGAVVAVV
        +F  CS VK +W  +K  S   +++  +F      +  KL     E+  V  W+VW   NA+  +  G    R +FD A  YL+ + +A          +
Subjt:  VFWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWN--GSVNERDLFDWASVYLSSFQQAASSNGAVVAVV

Query:  EDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL-------
            S    + VW P   D  KLN+D    P   + G G V+R++RG V       L  C + D+AEA AM  G+  A+++G     +E+D L       
Subjt:  EDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSL-------

Query:  --------------------------------RKGNMTAHVMTSLAFTY-ANFVWLEEWPSEVTDVICREV
                                        R  N TAH + S A       +W+E  PS    V+C ++
Subjt:  --------------------------------RKGNMTAHVMTSLAFTY-ANFVWLEEWPSEVTDVICREV

A0A6J1DAR4 uncharacterized protein LOC1110189545.7e-4834.2Show/hide
Query:  EDRLIWHFEENDPFSVRSRYRLA-LKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVF
        EDRLIW++E+   +SVRS Y++A L       PSSS   + R WW+  WK+++P+K+K+FLWRL  +RLPT  NL KRG+++TN C  C  + ED +H+F
Subjt:  EDRLIWHFEENDPFSVRSRYRLA-LKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVF

Query:  WKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNE-----RDLFDWASVYLSSFQQAASSNGAVVAV
        W C   +++W+ SKF  L       +   +L    E L   DFE + V  W +WN  NA  +N S         +L +WA+ Y   F++A S+       
Subjt:  WKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNE-----RDLFDWASVYLSSFQQAASSNGAVVAV

Query:  VEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMG---------------FR
           G+   T   +W+P D    K+N DA         G G ++ N RG+V  +A   L N  +VD AEA A ++G+Q A ++G                +
Subjt:  VEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMG---------------FR

Query:  WFSVETDSL--------RKGNMTAHVMTSLAFTYANF-VWLEEWPSEV
          +  T SL        R+GN  AH++   A     F +W+E+WP E+
Subjt:  WFSVETDSL--------RKGNMTAHVMTSLAFTYANF-VWLEEWPSEV

A0A803P3X4 Uncharacterized protein2.3e-3331.16Show/hide
Query:  VEDRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSL-EDCLHV
        +ED+++WH+ ++  +SVRS YR+A  L+ + + S +++T+   WW  LWKL +P KVK F+W+LA + LPT   L +R I V   C  C + + ED  H 
Subjt:  VEDRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSL-EDCLHV

Query:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNER-DLFDWASVYLSSFQQAASSNGAVVAVVED
         W C V + +W  + F          +    L  +   L   +FE  +V  W +W + N+V   G   +   + +W S +LS F+++ +          D
Subjt:  FWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNER-DLFDWASVYLSSFQQAASSNGAVVAVVED

Query:  GQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSLR
         Q R   A  W P  +D  K+N+DA VR E G     +V+R+  G V  +A   L        AE  A+ +G+Q   +     F+VE+D L+
Subjt:  GQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSLR

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.6e-1524.61Show/hide
Query:  DRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWK
        DRL W F ++  FSVRS Y + L +     P+ +       +++ LWK+ +P +VK FLW +    + T++   +R +  +N+C +C   +E  LHV   
Subjt:  DRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWK

Query:  CSVVKSMW---LGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFE-----IVVVFWWVVWNLHNAVLWNGSVNERDLF--DWA-SVYLSSFQQAASSNGA
        C     +W   +  +    +FS     F+++   + ++    D        V+++W   W   N    N    +R  F  +WA  VY       A S   
Subjt:  CSVVKSMW---LGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFE-----IVVVFWWVVWNLHNAVLWNGSVNERDLF--DWA-SVYLSSFQQAASSNGA

Query:  VVAVVEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS---
        +V +    Q R      W    V  +K+N D   R   G    G VLR+  G         +  C +   AE W +  G+  A +       +E DS   
Subjt:  VVAVVEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS---

Query:  ---LRKGNMTAHVMTSL
           L+ G   +H ++ L
Subjt:  ---LRKGNMTAHVMTSL

Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.7e-0727.03Show/hide
Query:  EDRLIWHFEENDPFSVRSRYRLALKLKSQG--LPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV
        +D  IW  + + P ++ S  + +L L  Q   +P          W+ ++W  N   K     W +A NRL T+D L   G+ +  +C++C+S  E   H+
Subjt:  EDRLIWHFEENDPFSVRSRYRLALKLKSQG--LPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHV

Query:  FWKCSVVKSMW
        F++C    ++W
Subjt:  FWKCSVVKSMW

AT2G02650.1 Ribonuclease H-like superfamily protein5.5e-1122.39Show/hide
Query:  PSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWKCSVVKSMWLGSKFASLYFSVMGPNFDFV--
        P S+++ Q      ++WKL++  K+K FLWR     L T   L  R ID   +C  C    E   H+ + C   +S+W  +    +  +  GP   F   
Subjt:  PSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWKCSVVKSMWLGSKFASLYFSVMGPNFDFV--

Query:  ---LWAVKEKLCIHDFEIVVVFW--WVVWNLHNAVLWNGSVNERDL-----FDWASVYLSSFQQAASSNGAVVAVVEDGQSRGTVACVWRPLDVDELKLN
           L  + +    +  +  + FW  W +W   N  L+       D         A+ +L++ +   ++N  V       Q+    +  W P     +K N
Subjt:  ---LWAVKEKLCIHDFEIVVVFW--WVVWNLHNAVLWNGSVNERDL-----FDWASVYLSSFQQAASSNGAVVAVVEDGQSRGTVACVWRPLDVDELKLN

Query:  IDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS
         D+           G  +R   G +       L +      AEA   L  +Q     G R+   E+DS
Subjt:  IDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS

AT3G25270.1 Ribonuclease H-like superfamily protein1.4e-0920.7Show/hide
Query:  SSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHD---
        + +WKL    K+K FLW+L    L T DNL +R I     C  C    E   H+F+ C   + +W  S          G   +  +  +    C+ +   
Subjt:  SSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWKCSVVKSMWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHD---

Query:  --FEIVVVFWWVVWNLHN-------AVLWNGSVN--ERDLFDW--ASVYLSSFQQAASSNGAVVAVVEDGQSRGTVACVWRPLDVDELKLNIDAPVRPEC
          F + +   W +W   N       ++ W  ++     D+ +W   + Y+ S  Q   S+          Q        W+      +K N D     + 
Subjt:  --FEIVVVFWWVVWNLHN-------AVLWNGSVN--ERDLFDW--ASVYLSSFQQAASSNGAVVAVVEDGQSRGTVACVWRPLDVDELKLNIDAPVRPEC

Query:  GTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSLRKGNMTAHVMTSLAFTYANFVWLEE
             G ++R+  G    S         +   +E  A++  +Q A   G+R    E DS         +M +    +  F W+ E
Subjt:  GTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSLRKGNMTAHVMTSLAFTYANFVWLEE

AT4G29090.1 Ribonuclease H-like superfamily protein2.0e-1323.33Show/hide
Query:  DRLIWHFEENDPFSVRSRYRLALK-LKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFW
        D   W +  +  ++V+S Y +  + +  +  P           +  +WK     K++ FLW+   N LP    L  R +   + C+ C S  E   H+ +
Subjt:  DRLIWHFEENDPFSVRSRYRLALK-LKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFW

Query:  KCSVVKSMW--------LGSKFA-SLY---FSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNG-SVNERDLFDWASVYLSSFQQAASS
        KC+  +  W        LG ++A S+Y   + V         W   EK      ++V    W +W   N +++ G   N +++   A   L  ++    +
Subjt:  KCSVVKSMW--------LGSKFA-SLY---FSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNG-SVNERDLFDWASVYLSSFQQAASS

Query:  NGAVVAVVEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS
                 +  S G     WRP     +K N DA    +    G G VLRN +GEV +     LP   +V  AE  AM   + +  +  + +   E+DS
Subjt:  NGAVVAVVEDGQSRGTVACVWRPLDVDELKLNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDS

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.7e-0533.33Show/hide
Query:  WWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWKC
        W  ++W      K     W   R+RLPT+D L+  G+ V +LC++C++  E   H+F+ C
Subjt:  WWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWKC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTGGAGGACCGTCTGATTTGGCATTTTGAGGAAAATGACCCTTTTTCTGTTAGAAGCAGATATCGTTTGGCTCTCAAGTTGAAGTCTCAAGGGCTCCCATCATC
TTCAGACATGACCCAAGGGCGTGTTTGGTGGTCCAGTTTATGGAAGTTGAATCTGCCTTCCAAGGTAAAGCTCTTTCTATGGAGATTAGCCCGTAATCGTTTGCCTACCA
AGGACAACTTGATTAAAAGAGGTATAGATGTCACAAACTTGTGTGTGATATGTCACTCTTCTCTTGAAGATTGTTTACATGTGTTTTGGAAATGTTCTGTTGTTAAAAGC
ATGTGGCTAGGATCTAAGTTTGCTTCATTATATTTCTCTGTTATGGGTCCTAACTTTGATTTTGTACTATGGGCGGTTAAGGAGAAGCTGTGTATTCATGACTTTGAAAT
TGTTGTTGTATTTTGGTGGGTTGTTTGGAATCTACATAATGCAGTATTGTGGAACGGGTCGGTAAATGAAAGGGATTTATTTGATTGGGCTTCTGTCTATTTGTCTTCGT
TCCAGCAAGCAGCATCGTCGAATGGGGCAGTGGTTGCGGTGGTAGAAGATGGCCAGTCGAGAGGCACGGTGGCTTGCGTGTGGAGGCCGCTTGATGTGGATGAACTGAAG
TTGAATATTGATGCGCCTGTTAGACCAGAGTGTGGGACTGTTGGGGGAGGTGCTGTTTTGAGAAACACGAGGGGTGAGGTATTTTTTTCTGCGTGCTTTACTCTCCCCAA
TTGTTGGAATGTTGATTTTGCGGAGGCTTGGGCGATGCTGAAGGGTATCCAAACTGCTCGTAAGATGGGATTCCGTTGGTTCAGTGTAGAAACCGATTCCCTGAGGAAAG
GCAATATGACTGCTCATGTAATGACATCTCTAGCGTTTACTTATGCAAATTTTGTTTGGCTTGAAGAGTGGCCTAGTGAGGTCACTGATGTAATATGTCGTGAGGTTTCT
CTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTGGAGGACCGTCTGATTTGGCATTTTGAGGAAAATGACCCTTTTTCTGTTAGAAGCAGATATCGTTTGGCTCTCAAGTTGAAGTCTCAAGGGCTCCCATCATC
TTCAGACATGACCCAAGGGCGTGTTTGGTGGTCCAGTTTATGGAAGTTGAATCTGCCTTCCAAGGTAAAGCTCTTTCTATGGAGATTAGCCCGTAATCGTTTGCCTACCA
AGGACAACTTGATTAAAAGAGGTATAGATGTCACAAACTTGTGTGTGATATGTCACTCTTCTCTTGAAGATTGTTTACATGTGTTTTGGAAATGTTCTGTTGTTAAAAGC
ATGTGGCTAGGATCTAAGTTTGCTTCATTATATTTCTCTGTTATGGGTCCTAACTTTGATTTTGTACTATGGGCGGTTAAGGAGAAGCTGTGTATTCATGACTTTGAAAT
TGTTGTTGTATTTTGGTGGGTTGTTTGGAATCTACATAATGCAGTATTGTGGAACGGGTCGGTAAATGAAAGGGATTTATTTGATTGGGCTTCTGTCTATTTGTCTTCGT
TCCAGCAAGCAGCATCGTCGAATGGGGCAGTGGTTGCGGTGGTAGAAGATGGCCAGTCGAGAGGCACGGTGGCTTGCGTGTGGAGGCCGCTTGATGTGGATGAACTGAAG
TTGAATATTGATGCGCCTGTTAGACCAGAGTGTGGGACTGTTGGGGGAGGTGCTGTTTTGAGAAACACGAGGGGTGAGGTATTTTTTTCTGCGTGCTTTACTCTCCCCAA
TTGTTGGAATGTTGATTTTGCGGAGGCTTGGGCGATGCTGAAGGGTATCCAAACTGCTCGTAAGATGGGATTCCGTTGGTTCAGTGTAGAAACCGATTCCCTGAGGAAAG
GCAATATGACTGCTCATGTAATGACATCTCTAGCGTTTACTTATGCAAATTTTGTTTGGCTTGAAGAGTGGCCTAGTGAGGTCACTGATGTAATATGTCGTGAGGTTTCT
CTTTAA
Protein sequenceShow/hide protein sequence
MLVEDRLIWHFEENDPFSVRSRYRLALKLKSQGLPSSSDMTQGRVWWSSLWKLNLPSKVKLFLWRLARNRLPTKDNLIKRGIDVTNLCVICHSSLEDCLHVFWKCSVVKS
MWLGSKFASLYFSVMGPNFDFVLWAVKEKLCIHDFEIVVVFWWVVWNLHNAVLWNGSVNERDLFDWASVYLSSFQQAASSNGAVVAVVEDGQSRGTVACVWRPLDVDELK
LNIDAPVRPECGTVGGGAVLRNTRGEVFFSACFTLPNCWNVDFAEAWAMLKGIQTARKMGFRWFSVETDSLRKGNMTAHVMTSLAFTYANFVWLEEWPSEVTDVICREVS
L