; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009503 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009503
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr9:39755768..39756799
RNA-Seq ExpressionLag0009503
SyntenyLag0009503
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604878.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.6e-16488.34Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY++LPDLFPSL+EAC +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLECHEYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_022140758.1 pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]3.4e-15987.76Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK GTT   AF L FHQF RQYSS H+ISPSQTLQE+IKAAVESK YKKLPDLFPSLR+AC +P+PFSFLSTLP NF TQVVDEILQSLIPLRPRSRPQ 
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGCVPAPQ HLLLSSAWLKQR QSKSVA++LLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GC+PDLESYGTLI ASTAVRRT EAVELL EMVVKVKLTPRQGTIINVVAALRANREIRRAV+IIELLEKES+NVGFESYELLV+GCL+C EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMT++GFIPYIRVRQKVVEGLA +GE+ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_022947166.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata]6.0e-16488.34Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY+KLPDLFPSL+EAC +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]4.2e-16589.21Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK+GT +T +F LHFHQF R  SS  SI+P+QTLQE+IKAAVESKSYKKLPDLFPSL+EAC +PNPFSFLST P NFRTQVVDEILQSLIPLRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC P PQ HLLLSSAWLKQR QSKSVAS+LLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPR+GT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_023533787.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo]1.0e-16388.34Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY+KLPDLFPSL+EAC +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRAN EIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein1.7e-15181.63Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        M IG TKT AF L+FH F  QYSS HSISPSQTLQ++IKAAVESKSYKKLPDLFPSL+EACH+PN F FLST P N RTQVVDEILQSLI +RPRS+ QF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGCVP+PQ H LLSSAWLKQR Q+KSVA++L+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GC+PDLESYGTLI A+TAVRRT +AVELL EMVVKVKL PRQGTI NVVAALR NRE+RRAV+IIELLE++S++VGFESYELLV+GCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMT++GFIPYI+VRQ+VVEGLAGIGE+ELASAVRRRF EL S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein1.2e-14981.92Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        M IG TKT AF L+FH F  Q SS HSISPSQTLQ++IKAAVESKSYKKLP LFPSL+EACH+PN F FLST P N RTQVVDEILQSLI +RPRS+ QF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGCVP+PQ H LLSSAWLKQR Q+KSVA++L+DM+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLI A+TAVRRT +AVELL EMVVKVKL PRQ TIINVVAALRANRE+RRAV+IIELLE++S++VGFESYELLV+GCLEC EYILAGKVI
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        M MT++GFIPYI+VRQKVVEGL GIGELELASAVRRRF EL S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A6J1CIR0 pentatricopeptide repeat-containing protein At1g062701.7e-15987.76Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK GTT   AF L FHQF RQYSS H+ISPSQTLQE+IKAAVESK YKKLPDLFPSLR+AC +P+PFSFLSTLP NF TQVVDEILQSLIPLRPRSRPQ 
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGCVPAPQ HLLLSSAWLKQR QSKSVA++LLDMRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GC+PDLESYGTLI ASTAVRRT EAVELL EMVVKVKLTPRQGTIINVVAALRANREIRRAV+IIELLEKES+NVGFESYELLV+GCL+C EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMT++GFIPYIRVRQKVVEGLA +GE+ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062702.9e-16488.34Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY+KLPDLFPSL+EAC +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LL+MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062702.0e-16589.21Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF
        MK+GT +T +F LHFHQF R  SS  SI+P+QTLQE+IKAAVESKSYKKLPDLFPSL+EAC +PNPFSFLST P NFRTQVVDEILQSLIPLRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC P PQ HLLLSSAWLKQR QSKSVAS+LLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPR+GT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

SwissProt top hitse value%identityAlignment
O49436 Pentatricopeptide repeat-containing protein At4g200909.5e-1128.02Show/hide
Query:  CVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN
        C+P    +  L     K+    ++V  +L +M+S G  P   I N LI  LC   +L    +++  M   GCVP+  +Y TLI       +  +AV LL 
Subjt:  CVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN

Query:  EMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL
        E +V  K  P   T   ++  L   R    AV+++  +E+  Y++    Y +L+ G  +  +   A  +   M EKG  P I V   +V+GL   G+   
Subjt:  EMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL

Query:  ASAVRRR
        A  +  R
Subjt:  ASAVRRR

Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial4.0e-0931.1Show/hide
Query:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQII
        G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A ELL+EM  K+ L P   T  ++V  L  +  I  AV+++
Subjt:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQII

Query:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE
           E    N    +Y  L+D   +  E   A +++  M  KG  P I     ++ G    G LE
Subjt:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE

Q9FH87 Putative pentatricopeptide repeat-containing protein At5g658201.2e-0825.71Show/hide
Query:  MLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANRE
        +L DMR  G+EP+++    LI +LC +D + EA +V   M R  C  D+ +Y  L+S      +  +   +L++M +K  L P + T ++++ A      
Subjt:  MLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANRE

Query:  IRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELELAS
            ++++E + +  Y+     Y +++    +  E   A ++   M E G  P +     ++ GLA  G L  AS
Subjt:  IRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELELAS

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic1.7e-1223.29Show/hide
Query:  FFRQYSSSHSISPSQ-TLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP
        F ++ S+     P Q T    +    ++   K   ++   + +  + P+ +++ S +    +   V E ++ L  +  R   P  V  + L  TL   + 
Subjt:  FFRQYSSSHSISPSQ-TLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP

Query:  LPLSLPVLQRILHSGCVP-APQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS
        +  +  + + +   G +P     + L+    L + H  +    +  +MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI 
Subjt:  LPLSLPVLQRILHSGCVP-APQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS

Query:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV
              +T EA E+ +EM V   ++    T   ++  L  +R +  A Q+++ +  E       +Y  L+       +   A  ++  MT  G  P I  
Subjt:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV

Query:  RQKVVEGLAGIGELELASAVRR
           ++ GL   G +E+AS + R
Subjt:  RQKVVEGLAGIGELELASAVRR

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062701.2e-9353.24Show/hide
Query:  KTCAFSLHFH---QFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHA
        K  A+S  F     FFR      SIS  + +++ IK AVE+K Y ++P+L  SL+E   +   FSFLS    + R +V+DEILQS +P+RPRS P+ V++
Subjt:  KTCAFSLHFH---QFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHA

Query:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV
        SLL Y LQS  PLPLS  +LQR L SGC+P PQ HLLLS AWL++R  S+SVA ++ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+
Subjt:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV

Query:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM
        PD+ESYG +I++    R+T + V+++ EMV K  ++PR+G +  V AALRANREI +A+++IE +E   Y V FESYE++V+GCLE  EYILAGKV+M M
Subjt:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM

Query:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        T++GFIPYI+VRQKVVE L  IGE +LA  VR+R +ELRS
Subjt:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.8e-1031.1Show/hide
Query:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQII
        G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A ELL+EM  K+ L P   T  ++V  L  +  I  AV+++
Subjt:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQII

Query:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE
           E    N    +Y  L+D   +  E   A +++  M  KG  P I     ++ G    G LE
Subjt:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein2.8e-1031.1Show/hide
Query:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQII
        G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A ELL+EM  K+ L P   T  ++V  L  +  I  AV+++
Subjt:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQII

Query:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE
           E    N    +Y  L+D   +  E   A +++  M  KG  P I     ++ G    G LE
Subjt:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE

AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein8.3e-9553.24Show/hide
Query:  KTCAFSLHFH---QFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHA
        K  A+S  F     FFR      SIS  + +++ IK AVE+K Y ++P+L  SL+E   +   FSFLS    + R +V+DEILQS +P+RPRS P+ V++
Subjt:  KTCAFSLHFH---QFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHA

Query:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV
        SLL Y LQS  PLPLS  +LQR L SGC+P PQ HLLLS AWL++R  S+SVA ++ +M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+
Subjt:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV

Query:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM
        PD+ESYG +I++    R+T + V+++ EMV K  ++PR+G +  V AALRANREI +A+++IE +E   Y V FESYE++V+GCLE  EYILAGKV+M M
Subjt:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM

Query:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        T++GFIPYI+VRQKVVE L  IGE +LA  VR+R +ELRS
Subjt:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein1.2e-1323.29Show/hide
Query:  FFRQYSSSHSISPSQ-TLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP
        F ++ S+     P Q T    +    ++   K   ++   + +  + P+ +++ S +    +   V E ++ L  +  R   P  V  + L  TL   + 
Subjt:  FFRQYSSSHSISPSQ-TLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSP

Query:  LPLSLPVLQRILHSGCVP-APQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS
        +  +  + + +   G +P     + L+    L + H  +    +  +MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI 
Subjt:  LPLSLPVLQRILHSGCVP-APQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS

Query:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV
              +T EA E+ +EM V   ++    T   ++  L  +R +  A Q+++ +  E       +Y  L+       +   A  ++  MT  G  P I  
Subjt:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV

Query:  RQKVVEGLAGIGELELASAVRR
           ++ GL   G +E+AS + R
Subjt:  RQKVVEGLAGIGELELASAVRR

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-1228.02Show/hide
Query:  CVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN
        C+P    +  L     K+    ++V  +L +M+S G  P   I N LI  LC   +L    +++  M   GCVP+  +Y TLI       +  +AV LL 
Subjt:  CVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN

Query:  EMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL
        E +V  K  P   T   ++  L   R    AV+++  +E+  Y++    Y +L+ G  +  +   A  +   M EKG  P I V   +V+GL   G+   
Subjt:  EMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL

Query:  ASAVRRR
        A  +  R
Subjt:  ASAVRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAGGAACAACAAAGACTTGTGCGTTCTCACTCCATTTCCATCAATTTTTCCGGCAATATTCTTCTAGCCACTCAATATCTCCATCACAAACCCTTCAAGAAAA
TATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACGGGAAGCTTGCCACAGCCCCAATCCTTTCTCGTTTCTCTCTACCTTGC
CTGATAACTTCAGAACACAAGTTGTGGATGAGATTTTGCAGTCATTAATCCCTCTTAGACCTCGCTCAAGGCCCCAGTTTGTTCATGCCTCTCTGCTTTTCTACACTCTT
CAAAGCCCATCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGCTCCTCAGATCCACCTTCTCCTCTCTTCTGCATGGCTAAA
ACAACGTCACCAGTCTAAGTCTGTTGCTAGTATGTTGTTGGACATGCGGTCAATTGGATATGAACCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCA
TTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGACGGGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACTTTAATCAGTGCATCAACAGCAGTTAGA
CGGACAGCTGAGGCTGTGGAATTGCTGAATGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGA
GATAAGGAGAGCAGTTCAGATCATTGAGCTCTTGGAGAAGGAGAGTTACAATGTTGGATTCGAGAGCTATGAGCTTCTCGTTGACGGTTGTTTGGAGTGTCATGAGTATA
TTTTAGCAGGAAAGGTGATCATGGGGATGACAGAAAAAGGGTTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGACTGGCTGGTATTGGAGAGCTGGAACTT
GCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAGGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAGGAACAACAAAGACTTGTGCGTTCTCACTCCATTTCCATCAATTTTTCCGGCAATATTCTTCTAGCCACTCAATATCTCCATCACAAACCCTTCAAGAAAA
TATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACGGGAAGCTTGCCACAGCCCCAATCCTTTCTCGTTTCTCTCTACCTTGC
CTGATAACTTCAGAACACAAGTTGTGGATGAGATTTTGCAGTCATTAATCCCTCTTAGACCTCGCTCAAGGCCCCAGTTTGTTCATGCCTCTCTGCTTTTCTACACTCTT
CAAAGCCCATCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGCTCCTCAGATCCACCTTCTCCTCTCTTCTGCATGGCTAAA
ACAACGTCACCAGTCTAAGTCTGTTGCTAGTATGTTGTTGGACATGCGGTCAATTGGATATGAACCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCA
TTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGACGGGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACTTTAATCAGTGCATCAACAGCAGTTAGA
CGGACAGCTGAGGCTGTGGAATTGCTGAATGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGA
GATAAGGAGAGCAGTTCAGATCATTGAGCTCTTGGAGAAGGAGAGTTACAATGTTGGATTCGAGAGCTATGAGCTTCTCGTTGACGGTTGTTTGGAGTGTCATGAGTATA
TTTTAGCAGGAAAGGTGATCATGGGGATGACAGAAAAAGGGTTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGACTGGCTGGTATTGGAGAGCTGGAACTT
GCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAGGTCTTAA
Protein sequenceShow/hide protein sequence
MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTL
QSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVR
RTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL
ASAVRRRFAELRS