; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009509 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009509
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionglycine-rich RNA-binding protein 4, mitochondrial-like
Genome locationchr9:39787145..39787864
RNA-Seq ExpressionLag0009509
SyntenyLag0009509
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570903.1 Glycine-rich RNA-binding protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.2e-2378.75Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQ---SSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++ N+LM +ARRALTNIQ+P L FRCFCSQ   SSSSAPSSSPS  NNKLFVAGLSWS+DERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQ---SSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

KAG7010748.1 Glycine-rich RNA-binding protein 4, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2278.48Show/hide
Query:  MNSTNSLMLVARRALTNIQSPTLRFRCFCSQ---SSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        M++ N+LM +ARRALTNIQ+P L FRCFCSQ   SSSSAPSSSPS  NNKLFVAGLSWS+DERSLKDAFSSFGEVTE +
Subjt:  MNSTNSLMLVARRALTNIQSPTLRFRCFCSQ---SSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

XP_022944150.1 glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita moschata]1.3e-2380Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++ N+LML+ARRALTNIQ+P L FRCFCSQSS   SSAPSSSPS  NNKLFVAGLSWS+DERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

XP_022986397.1 glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita maxima]1.3e-2380Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++ N+LML+ARRALTNIQ+P L FRCFCSQSS   SSAPSSSPS  NNKLFVAGLSWS+DERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

XP_023512965.1 glycine-rich RNA-binding protein 4, mitochondrial-like [Cucurbita pepo subsp. pepo]2.4e-2277.5Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQ---SSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++TN+LM + RRALTNIQ+P L FRCFCSQ   SSSSAPSSSPS  NNKLFVAGLSWS+DERSLKDAFSS+GEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQ---SSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

TrEMBL top hitse value%identityAlignment
A0A1S3C2R4 glycine-rich RNA-binding protein 3, mitochondrial7.4e-2277.92Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++TN+L+L+AR+ALTNIQ+P L FRCFCSQ S+SA SSSPS  +NKLFVAGLSWSMDERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

A0A5D3CH06 Glycine-rich RNA-binding protein 37.4e-2277.92Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++TN+L+L+AR+ALTNIQ+P L FRCFCSQ S+SA SSSPS  +NKLFVAGLSWSMDERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

A0A6J1CG90 glycine-rich RNA-binding protein 4, mitochondrial-like4.8e-2179.22Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++TN+ MLVARR LTNIQS TLR  CFCSQSS    SSSPS  NNKLFVAGLSWSMDERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

A0A6J1FYH8 glycine-rich RNA-binding protein 4, mitochondrial-like6.1e-2480Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++ N+LML+ARRALTNIQ+P L FRCFCSQSS   SSAPSSSPS  NNKLFVAGLSWS+DERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

A0A6J1J7F1 glycine-rich RNA-binding protein 4, mitochondrial-like6.1e-2480Show/hide
Query:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        MM++ N+LML+ARRALTNIQ+P L FRCFCSQSS   SSAPSSSPS  NNKLFVAGLSWS+DERSLKDAFSSFGEVTE +
Subjt:  MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSS---SSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

SwissProt top hitse value%identityAlignment
Q9LIS2 Glycine-rich RNA-binding protein 4, mitochondrial1.8e-0457.14Show/hide
Query:  SQSSSSAPSS---SPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEA
        SQSS+   +S   S    ++KLFV GLSW  D+ SLK AF+SFGEVTEA
Subjt:  SQSSSSAPSS---SPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEA

Q9SVM8 Glycine-rich RNA-binding protein 2, mitochondrial8.8e-0456.25Show/hide
Query:  NNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        + KLF+ GLSW  D+ SL+DAF+ FG+V +AK
Subjt:  NNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

Arabidopsis top hitse value%identityAlignment
AT3G08000.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-0863.27Show/hide
Query:  FCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        FC+ SSS++PSS       KLF+ GLSWS+DE+SLKDAFSSFGEV E +
Subjt:  FCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

AT3G23830.1 glycine-rich RNA-binding protein 41.3e-0557.14Show/hide
Query:  SQSSSSAPSS---SPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEA
        SQSS+   +S   S    ++KLFV GLSW  D+ SLK AF+SFGEVTEA
Subjt:  SQSSSSAPSS---SPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEA

AT3G23830.2 glycine-rich RNA-binding protein 41.3e-0557.14Show/hide
Query:  SQSSSSAPSS---SPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEA
        SQSS+   +S   S    ++KLFV GLSW  D+ SLK AF+SFGEVTEA
Subjt:  SQSSSSAPSS---SPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEA

AT4G13850.1 glycine-rich RNA-binding protein 26.2e-0556.25Show/hide
Query:  NNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        + KLF+ GLSW  D+ SL+DAF+ FG+V +AK
Subjt:  NNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK

AT4G13850.2 glycine-rich RNA-binding protein 26.2e-0556.25Show/hide
Query:  NNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK
        + KLF+ GLSW  D+ SL+DAF+ FG+V +AK
Subjt:  NNKLFVAGLSWSMDERSLKDAFSSFGEVTEAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAACAGCACGAACTCCTTGATGCTGGTTGCCAGAAGAGCACTCACCAATATCCAAAGCCCAACTCTGAGATTTCGATGCTTCTGTTCTCAATCCTCCTCCTCAGC
TCCTTCGTCTTCTCCTTCTGAAACAAACAACAAGCTCTTTGTTGCAGGGTTGTCGTGGTCGATGGATGAGAGATCCTTGAAAGATGCGTTTTCTTCCTTTGGGGAGGTTA
CTGAAGCAAAACAACGAGAAATTTCGAAAATGAAAATTCTGCACGAGGAGGAATTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAACAGCACGAACTCCTTGATGCTGGTTGCCAGAAGAGCACTCACCAATATCCAAAGCCCAACTCTGAGATTTCGATGCTTCTGTTCTCAATCCTCCTCCTCAGC
TCCTTCGTCTTCTCCTTCTGAAACAAACAACAAGCTCTTTGTTGCAGGGTTGTCGTGGTCGATGGATGAGAGATCCTTGAAAGATGCGTTTTCTTCCTTTGGGGAGGTTA
CTGAAGCAAAACAACGAGAAATTTCGAAAATGAAAATTCTGCACGAGGAGGAATTGTGA
Protein sequenceShow/hide protein sequence
MMNSTNSLMLVARRALTNIQSPTLRFRCFCSQSSSSAPSSSPSETNNKLFVAGLSWSMDERSLKDAFSSFGEVTEAKQREISKMKILHEEEL