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Lag0009598 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009598
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr9:40761149..40761835
RNA-Seq ExpressionLag0009598
SyntenyLag0009598
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY85402.1 hypothetical protein Acr_04g0001400 [Actinidia rufa]8.2e-2637.44Show/hide
Query:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP-FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPA
        P PPPP+SN    P+ + P P      ++P P  PS+  PL +KL D NY++WK QLLN +IA G+E F++ +                           
Subjt:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP-FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPA

Query:  PPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFP
        PP+FLD  Q Q NP F  WQ+Y R++MSW+Y+S+NE  LG+I+G + A +I E L R +Y + S   +  LR+ LQ I+K+GLT   Y+ + + + +   
Subjt:  PPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFP

Query:  AIG
        +IG
Subjt:  AIG

GFZ12741.1 UBX domain-containing protein [Actinidia rufa]4.1e-2538.54Show/hide
Query:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP---FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDT
        P PPPP+SN    P+ + P P  PQ  +T SP    PS+  PL +KL D NY++WK QLLN +IA G+E F++ +                         
Subjt:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP---FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDT

Query:  PAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADK
          PP+FLD  Q Q NP F  WQ+Y R++MSW+Y+S+NE  LG+I+G + A +I E L R +Y + S   +  LR+ LQ I+K+GLT   Y+ + + + + 
Subjt:  PAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADK

Query:  FPAIG
          +IG
Subjt:  FPAIG

PON47862.1 hypothetical protein TorRG33x02_321990 [Trema orientale]1.0e-2336.84Show/hide
Query:  TGFPYPPPPSSNLPFFPTY----NPPGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDF
        TG P    P +N+P          PP P  P         PS+  P  IKL   NYL+WKNQLLN IIA G+E FI+                       
Subjt:  TGFPYPPPPSSNLPFFPTY----NPPGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDF

Query:  INDTPAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKD
            P PP+F D  +  VN  +  WQ++ R++MSW+Y+SL +  +G+I+G + AFEI E L + +Y S S  +I  LR++LQ +RKDGLT  +Y+ + K+
Subjt:  INDTPAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKD

Query:  IADKFPAIG
        I +   A+G
Subjt:  IADKFPAIG

RVW56403.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]1.1e-2742.93Show/hide
Query:  TYNP----PGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQ
        T NP    P P+F     T + +PSL+ PL IKL ++N  LWKNQLLN IIA G+E FI                          +TP P KFLD  Q Q
Subjt:  TYNP----PGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQ

Query:  VNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAI
        VNP F  W++   ++MSW+Y SL    +G I+    A EI   L R VY+S S T ++ L SQLQKI+K+G+T+S+YLA IK++ DK+ A+
Subjt:  VNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAI

XP_022155181.1 uncharacterized protein LOC111022315 [Momordica charantia]3.0e-3645.26Show/hide
Query:  YNPPGPLF---PQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQVN
        + PP P F   P +  + +PFP+L  PLN+KL+D+N+LLWKNQLLN +IA G+  +++ T  P                        PP+FLD  Q Q N
Subjt:  YNPPGPLF---PQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQVN

Query:  PHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAIG
        P +  W++Y R+LM W+YSSL+E+K+GE++      +I   L R VY+S +T RIMGL+++LQ +RKDG +VSQYLA+IK+IADKF A+G
Subjt:  PHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAIG

TrEMBL top hitse value%identityAlignment
A0A2P5BGF8 Uncharacterized protein4.8e-2436.84Show/hide
Query:  TGFPYPPPPSSNLPFFPTY----NPPGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDF
        TG P    P +N+P          PP P  P         PS+  P  IKL   NYL+WKNQLLN IIA G+E FI+                       
Subjt:  TGFPYPPPPSSNLPFFPTY----NPPGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDF

Query:  INDTPAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKD
            P PP+F D  +  VN  +  WQ++ R++MSW+Y+SL +  +G+I+G + AFEI E L + +Y S S  +I  LR++LQ +RKDGLT  +Y+ + K+
Subjt:  INDTPAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKD

Query:  IADKFPAIG
        I +   A+G
Subjt:  IADKFPAIG

A0A438F8X3 Retrovirus-related Pol polyprotein from transposon RE15.5e-2842.93Show/hide
Query:  TYNP----PGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQ
        T NP    P P+F     T + +PSL+ PL IKL ++N  LWKNQLLN IIA G+E FI                          +TP P KFLD  Q Q
Subjt:  TYNP----PGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQ

Query:  VNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAI
        VNP F  W++   ++MSW+Y SL    +G I+    A EI   L R VY+S S T ++ L SQLQKI+K+G+T+S+YLA IK++ DK+ A+
Subjt:  VNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAI

A0A6J1DQX7 uncharacterized protein LOC1110223151.5e-3645.26Show/hide
Query:  YNPPGPLF---PQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQVN
        + PP P F   P +  + +PFP+L  PLN+KL+D+N+LLWKNQLLN +IA G+  +++ T  P                        PP+FLD  Q Q N
Subjt:  YNPPGPLF---PQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKFLDTVQTQVN

Query:  PHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAIG
        P +  W++Y R+LM W+YSSL+E+K+GE++      +I   L R VY+S +T RIMGL+++LQ +RKDG +VSQYLA+IK+IADKF A+G
Subjt:  PHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAIG

A0A7J0EGI5 Uncharacterized protein4.0e-2637.44Show/hide
Query:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP-FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPA
        P PPPP+SN    P+ + P P      ++P P  PS+  PL +KL D NY++WK QLLN +IA G+E F++ +                           
Subjt:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP-FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPA

Query:  PPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFP
        PP+FLD  Q Q NP F  WQ+Y R++MSW+Y+S+NE  LG+I+G + A +I E L R +Y + S   +  LR+ LQ I+K+GLT   Y+ + + + +   
Subjt:  PPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFP

Query:  AIG
        +IG
Subjt:  AIG

A0A7J0GPN0 UBX domain-containing protein2.0e-2538.54Show/hide
Query:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP---FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDT
        P PPPP+SN    P+ + P P  PQ  +T SP    PS+  PL +KL D NY++WK QLLN +IA G+E F++ +                         
Subjt:  PYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSP---FPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDT

Query:  PAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADK
          PP+FLD  Q Q NP F  WQ+Y R++MSW+Y+S+NE  LG+I+G + A +I E L R +Y + S   +  LR+ LQ I+K+GLT   Y+ + + + + 
Subjt:  PAPPKFLDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADK

Query:  FPAIG
          +IG
Subjt:  FPAIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGCACCCAACTGGGTTTCCTTACCCACCACCTCCATCTTCGAATCTACCATTCTTTCCTACTTATAATCCGCCTGGCCCTCTTTTTCCCCAAGATAAATCGACGCC
GTCTCCATTTCCTTCCCTAACTCCTCCCCTCAACATTAAGCTTTCTGATTCCAACTACCTACTATGGAAGAATCAACTCCTCAATCGCATTATCGCATTTGGTATGGAAC
ATTTCATCAACGACACCCCTGCTCCACCGAAATTCTTGGACACTGCCCAAACTCAAGATTCTTATGAGTTGGATGATTTCATCAACGACACCCCTGCTCCACCAAAATTC
TTGGACACTGTCCAAACTCAAGTAAATCCTCATTTTACCATTTGGCAAAAATATACTAGGATTCTTATGAGTTGGATGTATTCGTCTTTGAATGAGGATAAGCTTGGGGA
AATTATTGGTTGCTCTTATGCTTTTGAGATTTTGGAGCATCTTCGTCGGTCTGTCTATGAATCCTTGTCTACAACTAGAATTATGGGGCTTCGATCTCAGCTTCAAAAAA
TTAGGAAGGATGGTCTTACAGTCTCTCAATACCTTGCTCAGATTAAGGACATTGCTGACAAGTTCCCTGCTATTGGGGGAAGCTTTGTCATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGCACCCAACTGGGTTTCCTTACCCACCACCTCCATCTTCGAATCTACCATTCTTTCCTACTTATAATCCGCCTGGCCCTCTTTTTCCCCAAGATAAATCGACGCC
GTCTCCATTTCCTTCCCTAACTCCTCCCCTCAACATTAAGCTTTCTGATTCCAACTACCTACTATGGAAGAATCAACTCCTCAATCGCATTATCGCATTTGGTATGGAAC
ATTTCATCAACGACACCCCTGCTCCACCGAAATTCTTGGACACTGCCCAAACTCAAGATTCTTATGAGTTGGATGATTTCATCAACGACACCCCTGCTCCACCAAAATTC
TTGGACACTGTCCAAACTCAAGTAAATCCTCATTTTACCATTTGGCAAAAATATACTAGGATTCTTATGAGTTGGATGTATTCGTCTTTGAATGAGGATAAGCTTGGGGA
AATTATTGGTTGCTCTTATGCTTTTGAGATTTTGGAGCATCTTCGTCGGTCTGTCTATGAATCCTTGTCTACAACTAGAATTATGGGGCTTCGATCTCAGCTTCAAAAAA
TTAGGAAGGATGGTCTTACAGTCTCTCAATACCTTGCTCAGATTAAGGACATTGCTGACAAGTTCCCTGCTATTGGGGGAAGCTTTGTCATATAG
Protein sequenceShow/hide protein sequence
MRHPTGFPYPPPPSSNLPFFPTYNPPGPLFPQDKSTPSPFPSLTPPLNIKLSDSNYLLWKNQLLNRIIAFGMEHFINDTPAPPKFLDTAQTQDSYELDDFINDTPAPPKF
LDTVQTQVNPHFTIWQKYTRILMSWMYSSLNEDKLGEIIGCSYAFEILEHLRRSVYESLSTTRIMGLRSQLQKIRKDGLTVSQYLAQIKDIADKFPAIGGSFVI