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Lag0009628 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009628
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCell wall protein
Genome locationchr9:40947375..40947734
RNA-Seq ExpressionLag0009628
SyntenyLag0009628
Gene Ontology termsNA
InterPro domainsIPR034565 - Putative cell wall protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4304874.1 unnamed protein product [Prunus armeniaca]5.4e-1948.48Show/hide
Query:  MAYRTVSSLLPIV---FVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPY----------DKGSSGGGHAGSYGSNSAPR--
        MA +T SS LP++    V+L ITG+AVA R+   +   DDKKQP+W IG+DG S LIPGIGR+ + P           D GS+G    G  GS  AP   
Subjt:  MAYRTVSSLLPIV---FVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPY----------DKGSSGGGHAGSYGSNSAPR--

Query:  RQYIPGGDDNFIPNPGYEVPIPANIDGVKEAP
          Y+PGGDD F+PNPGYEVP P N  G    P
Subjt:  RQYIPGGDDNFIPNPGYEVPIPANIDGVKEAP

KAA0065341.1 putative cell wall protein [Cucumis melo var. makuwa]1.7e-3368.07Show/hide
Query:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP
        MA+R   SL PI  VIL +TGEAVAAR+F E                   SVLIPGIGRITLSPYDKGS GGGH+ SYGSN AP+RQYIPGGDDNFIPNP
Subjt:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP

Query:  GYEVPIPANIDGVKEAPYP
        GYEVPIPANI GVKE  YP
Subjt:  GYEVPIPANIDGVKEAPYP

XP_008230254.1 PREDICTED: putative cell wall protein [Prunus mume]5.4e-1948.48Show/hide
Query:  MAYRTVSSLLPIV---FVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPY----------DKGSSGGGHAGSYGSNSAPR--
        MA +T SS LP++    V+L ITG+AVA R+   +   DDKKQP+W IG+DG S LIPGIGR+   P           D GS+  G+ G  GS  AP   
Subjt:  MAYRTVSSLLPIV---FVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPY----------DKGSSGGGHAGSYGSNSAPR--

Query:  RQYIPGGDDNFIPNPGYEVPIPANIDGVKEAP
          Y+PGGDD F+PNPGYEVP P N  G    P
Subjt:  RQYIPGGDDNFIPNPGYEVPIPANIDGVKEAP

XP_022140620.1 putative cell wall protein [Momordica charantia]9.1e-4376.67Show/hide
Query:  MAYRTVSSLLPI-VFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPN
        MAYRT+SSLLPI + +IL + GEA AARN RE+SS+DDKKQPQWL+GYDGVSVLIPGIGRITL PYDKGS  G HAGSYGSN A   QYIPGGDDNFIPN
Subjt:  MAYRTVSSLLPI-VFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPN

Query:  PGYEVPIPANIDGVKEAPYP
        PG+EVP PANI  VK  P+P
Subjt:  PGYEVPIPANIDGVKEAPYP

XP_022970746.1 putative cell wall protein [Cucurbita maxima]6.8e-4678.99Show/hide
Query:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP
        MA RT++SLL    VIL I GEAVAARN  ERSS+DDKKQP+W+ G+DGVSVLIPGIGR TLSP+DKGSSG G AGSYGSN APRRQYIPGGDDNFIPNP
Subjt:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP

Query:  GYEVPIPANIDGVKEAPYP
        G+EVPIPA I GVKE PYP
Subjt:  GYEVPIPANIDGVKEAPYP

TrEMBL top hitse value%identityAlignment
A0A0A0KCX5 Uncharacterized protein9.6e-2256.3Show/hide
Query:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP
        MA+R + S+LPI  VIL +TGEAVA                        VSVLIPGIGR+TL       S GGH+ SYGSN APRRQYIPGGD NFIPNP
Subjt:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP

Query:  GYEVPIPANIDGVKEAPYP
        GYEV I A+I GVKE  YP
Subjt:  GYEVPIPANIDGVKEAPYP

A0A5D3BC54 Putative cell wall protein8.3e-3468.07Show/hide
Query:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP
        MA+R   SL PI  VIL +TGEAVAAR+F E                   SVLIPGIGRITLSPYDKGS GGGH+ SYGSN AP+RQYIPGGDDNFIPNP
Subjt:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP

Query:  GYEVPIPANIDGVKEAPYP
        GYEVPIPANI GVKE  YP
Subjt:  GYEVPIPANIDGVKEAPYP

A0A6J1CFL0 putative cell wall protein4.4e-4376.67Show/hide
Query:  MAYRTVSSLLPI-VFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPN
        MAYRT+SSLLPI + +IL + GEA AARN RE+SS+DDKKQPQWL+GYDGVSVLIPGIGRITL PYDKGS  G HAGSYGSN A   QYIPGGDDNFIPN
Subjt:  MAYRTVSSLLPI-VFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPN

Query:  PGYEVPIPANIDGVKEAPYP
        PG+EVP PANI  VK  P+P
Subjt:  PGYEVPIPANIDGVKEAPYP

A0A6J1I1F6 putative cell wall protein3.3e-4678.99Show/hide
Query:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP
        MA RT++SLL    VIL I GEAVAARN  ERSS+DDKKQP+W+ G+DGVSVLIPGIGR TLSP+DKGSSG G AGSYGSN APRRQYIPGGDDNFIPNP
Subjt:  MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNP

Query:  GYEVPIPANIDGVKEAPYP
        G+EVPIPA I GVKE PYP
Subjt:  GYEVPIPANIDGVKEAPYP

A0A6J5X0W5 Uncharacterized protein2.6e-1948.48Show/hide
Query:  MAYRTVSSLLPIV---FVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPY----------DKGSSGGGHAGSYGSNSAPR--
        MA +T SS LP++    V+L ITG+AVA R+   +   DDKKQP+W IG+DG S LIPGIGR+ + P           D GS+G    G  GS  AP   
Subjt:  MAYRTVSSLLPIV---FVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPY----------DKGSSGGGHAGSYGSNSAPR--

Query:  RQYIPGGDDNFIPNPGYEVPIPANIDGVKEAP
          Y+PGGDD F+PNPGYEVP P N  G    P
Subjt:  RQYIPGGDDNFIPNPGYEVPIPANIDGVKEAP

SwissProt top hitse value%identityAlignment
P47925 Putative cell wall protein4.2e-0628.45Show/hide
Query:  TVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYD-GVSVLIPGIGRITLSPYDKGS------------SGGGHAGSYGSNSAPRRQYIPG
        T + ++ ++ ++L    +    R+  +     D K P +L+  +   ++LIPG+GR  L P  K              +GGG     G   A     +PG
Subjt:  TVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYD-GVSVLIPGIGRITLSPYDKGS------------SGGGHAGSYGSNSAPRRQYIPG

Query:  GDDNFIPNPGYEVPIP
        GDD  +PNPG+E P P
Subjt:  GDDNFIPNPGYEVPIP

Arabidopsis top hitse value%identityAlignment
AT2G20870.1 cell wall protein precursor, putative3.0e-0728.45Show/hide
Query:  TVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYD-GVSVLIPGIGRITLSPYDKGS------------SGGGHAGSYGSNSAPRRQYIPG
        T + ++ ++ ++L    +    R+  +     D K P +L+  +   ++LIPG+GR  L P  K              +GGG     G   A     +PG
Subjt:  TVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYD-GVSVLIPGIGRITLSPYDKGS------------SGGGHAGSYGSNSAPRRQYIPG

Query:  GDDNFIPNPGYEVPIP
        GDD  +PNPG+E P P
Subjt:  GDDNFIPNPGYEVPIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTACAGAACCGTTTCTTCTCTGCTTCCGATCGTCTTCGTGATCCTCACAATAACTGGAGAAGCAGTTGCAGCTCGCAACTTTCGCGAAAGGTCGAGCGTTGATGA
TAAGAAACAGCCTCAGTGGCTAATTGGATACGATGGGGTAAGCGTGCTCATTCCTGGCATTGGGCGCATCACATTGTCACCATATGACAAAGGCAGCTCTGGAGGAGGGC
ATGCAGGTTCATATGGCAGTAACTCAGCTCCAAGACGTCAATATATTCCAGGTGGGGATGATAATTTCATTCCAAATCCTGGATATGAGGTGCCAATCCCTGCCAACATT
GATGGCGTTAAAGAAGCACCCTATCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTACAGAACCGTTTCTTCTCTGCTTCCGATCGTCTTCGTGATCCTCACAATAACTGGAGAAGCAGTTGCAGCTCGCAACTTTCGCGAAAGGTCGAGCGTTGATGA
TAAGAAACAGCCTCAGTGGCTAATTGGATACGATGGGGTAAGCGTGCTCATTCCTGGCATTGGGCGCATCACATTGTCACCATATGACAAAGGCAGCTCTGGAGGAGGGC
ATGCAGGTTCATATGGCAGTAACTCAGCTCCAAGACGTCAATATATTCCAGGTGGGGATGATAATTTCATTCCAAATCCTGGATATGAGGTGCCAATCCCTGCCAACATT
GATGGCGTTAAAGAAGCACCCTATCCTTGA
Protein sequenceShow/hide protein sequence
MAYRTVSSLLPIVFVILTITGEAVAARNFRERSSVDDKKQPQWLIGYDGVSVLIPGIGRITLSPYDKGSSGGGHAGSYGSNSAPRRQYIPGGDDNFIPNPGYEVPIPANI
DGVKEAPYP