; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009696 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009696
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:41515408..41515791
RNA-Seq ExpressionLag0009696
SyntenyLag0009696
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5468871.1 hypothetical protein F2P56_012982 [Juglans regia]1.0e-1235.34Show/hide
Query:  KDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWM
        K  + D  +AE YA  K++EL  D+  G  I E D   +  ++N E ED+S  G +I DA        Q   +FV+R+ N+AAH LA+ A++   + VW+
Subjt:  KDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWM

Query:  ETCPRCLEDVVLNDSM
        E  P C+E ++L + +
Subjt:  ETCPRCLEDVVLNDSM

XP_022135942.1 uncharacterized protein LOC111007775 [Momordica charantia]4.4e-1139.84Show/hide
Query:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHREGNQAAHRLARLAI
        +LSA     +V DV +AE  AA + + L  + GL P  +ETDSS+VF +L  + ED SE+G ++A ++    S+L +   F FV+REGN  AH LAR+ +
Subjt:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHREGNQAAHRLARLAI

Query:  AQWSDEVWMETCPRCLEDVVLND
           S  VW+E     L +V+  D
Subjt:  AQWSDEVWMETCPRCLEDVVLND

XP_022140628.1 uncharacterized protein LOC111011237 [Momordica charantia]2.2e-1843.31Show/hide
Query:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ
        M SAT   +N++ VDMAE   AV+ L+L + +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F FV REGN+AAH LAR A+  
Subjt:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ

Query:  WSDEVWMETCP---------RCLEDVV
            +WME  P          CLE++V
Subjt:  WSDEVWMETCP---------RCLEDVV

XP_022753674.1 uncharacterized protein LOC111301987 [Durio zibethinus]9.8e-1133.87Show/hide
Query:  MLSATFTK-DNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIA
        +L A  T+  NV +  M E +AA K++++   M     ILE D+  V   +  ERED+S +G I+AD      +        V R+ N+AAHRLA + + 
Subjt:  MLSATFTK-DNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIA

Query:  QWSDEVWMETCPRCLEDVVLNDSM
          SDE+W+  CP    ++V+ +S+
Subjt:  QWSDEVWMETCPRCLEDVVLNDSM

XP_042939569.1 uncharacterized protein LOC122274612 [Carya illinoinensis]3.1e-1235.48Show/hide
Query:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ
        M++    + +V D  +AE  A  K+LEL  D+ +   I E D+  V   +NRE ED+S +G +I D  + F  N     QF HRE N  AH LAR A+  
Subjt:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ

Query:  WSDEVWMETCPRCLEDVVLNDSMY
           +VW+E  P  +   + +D +Y
Subjt:  WSDEVWMETCPRCLEDVVLNDSMY

TrEMBL top hitse value%identityAlignment
A0A2I4ELF3 uncharacterized protein LOC1089906631.1e-1032.43Show/hide
Query:  VRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC
        V D   A+GYA  K++E   D+     + E D+  +  ++N E + +S  G +I DA        Q   +FV+R  N+AAH LA+ A++ +S+ VW+E  
Subjt:  VRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC

Query:  PRCLEDVVLND
        P C+E ++  +
Subjt:  PRCLEDVVLND

A0A6J1C467 uncharacterized protein LOC1110077752.1e-1139.84Show/hide
Query:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHREGNQAAHRLARLAI
        +LSA     +V DV +AE  AA + + L  + GL P  +ETDSS+VF +L  + ED SE+G ++A ++    S+L +   F FV+REGN  AH LAR+ +
Subjt:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQV--LFQFVHREGNQAAHRLARLAI

Query:  AQWSDEVWMETCPRCLEDVVLND
           S  VW+E     L +V+  D
Subjt:  AQWSDEVWMETCPRCLEDVVLND

A0A6J1CIF1 uncharacterized protein LOC1110112371.1e-1843.31Show/hide
Query:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ
        M SAT   +N++ VDMAE   AV+ L+L + +G+ P ILETDSSR+F + ++  ED+SE G I+  A   +  +L   F FV REGN+AAH LAR A+  
Subjt:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ

Query:  WSDEVWMETCP---------RCLEDVV
            +WME  P          CLE++V
Subjt:  WSDEVWMETCP---------RCLEDVV

A0A6J1DAR4 uncharacterized protein LOC1110189543.1e-1037.82Show/hide
Query:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ
        M +AT   +N++ VDMAE  AAV+ L+L +++G+ P +                ED+SE G I+  A   +  +L   F FV REGN+AAH LAR A+  
Subjt:  MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQ

Query:  WSDEVWMETCP----RCLE
            +WME  P     CLE
Subjt:  WSDEVWMETCP----RCLE

A0A6P5ZLI0 uncharacterized protein LOC1113019874.8e-1133.87Show/hide
Query:  MLSATFTK-DNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIA
        +L A  T+  NV +  M E +AA K++++   M     ILE D+  V   +  ERED+S +G I+AD      +        V R+ N+AAHRLA + + 
Subjt:  MLSATFTK-DNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIA

Query:  QWSDEVWMETCPRCLEDVVLNDSM
          SDE+W+  CP    ++V+ +S+
Subjt:  QWSDEVWMETCPRCLEDVVLNDSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCGGCGACCTTTACTAAGGATAATGTGAGGGATGTTGACATGGCTGAAGGATATGCGGCCGTGAAAAGTTTGGAGTTGGTGACAGATATGGGTTTGGGTCCAAC
AATTCTTGAGACAGATTCAAGTAGAGTTTTCCAGATCCTTAATCGAGAACGTGAGGATATTTCTGAGCTAGGTATGATTATTGCAGATGCACTAATGGCTTTTCCCTCTA
ATTTGCAGGTACTGTTTCAGTTCGTTCACCGTGAAGGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCCCAGTGGAGTGATGAGGTTTGGATGGAGACTTGT
CCTAGGTGTCTGGAGGACGTGGTTTTGAACGATTCAATGTACATGGAGGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCGGCGACCTTTACTAAGGATAATGTGAGGGATGTTGACATGGCTGAAGGATATGCGGCCGTGAAAAGTTTGGAGTTGGTGACAGATATGGGTTTGGGTCCAAC
AATTCTTGAGACAGATTCAAGTAGAGTTTTCCAGATCCTTAATCGAGAACGTGAGGATATTTCTGAGCTAGGTATGATTATTGCAGATGCACTAATGGCTTTTCCCTCTA
ATTTGCAGGTACTGTTTCAGTTCGTTCACCGTGAAGGGAATCAGGCGGCGCACCGATTGGCGAGGTTAGCAATAGCCCAGTGGAGTGATGAGGTTTGGATGGAGACTTGT
CCTAGGTGTCTGGAGGACGTGGTTTTGAACGATTCAATGTACATGGAGGCATGA
Protein sequenceShow/hide protein sequence
MLSATFTKDNVRDVDMAEGYAAVKSLELVTDMGLGPTILETDSSRVFQILNREREDISELGMIIADALMAFPSNLQVLFQFVHREGNQAAHRLARLAIAQWSDEVWMETC
PRCLEDVVLNDSMYMEA