; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009698 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009698
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr9:41524489..41525556
RNA-Seq ExpressionLag0009698
SyntenyLag0009698
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604761.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.2e-10863.77Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        +PLHALTITMGPVPNQ IFVHNNL+FQYSS+G+LL+A NLFDEMPHRNVVSYNTIISAYSRRG VKEAWDLFSEMRDCGFVPTQFTFGGLLSA+LLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL
        GAQLQGLSVKNG+FDADAIVGT +LG+Y R+GCFEEALRVFEDM  KSL TWNSILSLLGRSQLVD+                               DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQQLH                                                    G KV++PE+ALELFY+M   GLIPTQ SFVN V+SCS + S
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKTIR A ESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

XP_008456417.1 PREDICTED: pentatricopeptide repeat-containing protein At3g58590 [Cucumis melo]3.7e-10863.77Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        + LHALTITMGPVPNQ IFVHNNL+ QY+SIGML +A NLFDEMPHRNVVSYNT+IS Y R G VKEAWDLFSEMR+CGF PTQFTFGGLLS ELLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL
        GAQLQGLSVKNGLF + AIVGT +LG+Y RDGCFEEALRV EDMC KSL TWNSILSLLGR+QLVD                              + DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQ LH                                                    G KVNRPEIALELFYSMA+NGL PTQ SFVNAVNSCSCLGS
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKT+RYALESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

XP_022947134.1 pentatricopeptide repeat-containing protein At3g58590 [Cucurbita moschata]8.3e-10863.47Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        +PLHALTITMGPVPNQ IFVHNNL+FQYSS+G+LL+A NLFDEMPHRNVVSYNTIISAYSRRG VKEAWDLFSEMR+CGFVPTQFTFGGLLSA+LLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL
        GAQLQGLSVKNG+FDADAIVGT +LG+Y R+GCFEEALRVFEDM  KSL TWNSILSLLGRSQLVD+                               DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQQLH                                                    G KV++PE+ALELFY+M   GLIPTQ SFVN V+SCS + S
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKTIR A ESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

XP_022971166.1 pentatricopeptide repeat-containing protein At3g58590 [Cucurbita maxima]4.1e-10763.47Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        +PLHA TITMGPVPNQ IFV NNL+FQYSS+G+LL+A NLFDEMPHRNVVSYNTIISAYSRRG VKEAWDLFSEMRDCGFVPTQFTFGGLLSA+LLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL
        GAQLQGLSVKNG+FDADAIVGT +LG+Y R+GCFEEALRVFEDM  KSL TWNSILSLLGRSQLVD+                               DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQQLH                                                    G KV++PE+ALE FYSM   GLIPTQ SFVN VNSCS + S
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKTIR A ESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

XP_038902940.1 pentatricopeptide repeat-containing protein At3g58590 [Benincasa hispida]4.1e-10763.77Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        KPLHALTITMGPVPNQ IFVHNNL+FQYSSIGMLLVA ++FDEMP RNVVSYNT+IS YSR G VKEAWDLFSEMRDCGF PTQFTFGGLLS ELLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL
        GAQLQGLSVKNGLF + A+VGTT+LG+Y RDGCF+EALRVFEDM  KSL TWNS+LSLLGR+QLVD                              + DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQ LH                                                    GAKVNRPEIALELFY+M SNGLIPTQ SFVNAVNSCSCL S
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSK I YALESDVFVGT LIDFY  F+
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

TrEMBL top hitse value%identityAlignment
A0A1S3C2S6 pentatricopeptide repeat-containing protein At3g585901.8e-10863.77Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        + LHALTITMGPVPNQ IFVHNNL+ QY+SIGML +A NLFDEMPHRNVVSYNT+IS Y R G VKEAWDLFSEMR+CGF PTQFTFGGLLS ELLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL
        GAQLQGLSVKNGLF + AIVGT +LG+Y RDGCFEEALRV EDMC KSL TWNSILSLLGR+QLVD                              + DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQ LH                                                    G KVNRPEIALELFYSMA+NGL PTQ SFVNAVNSCSCLGS
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKT+RYALESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

A0A5A7UHJ9 Pentatricopeptide repeat-containing protein1.8e-10863.77Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        + LHALTITMGPVPNQ IFVHNNL+ QY+SIGML +A NLFDEMPHRNVVSYNT+IS Y R G VKEAWDLFSEMR+CGF PTQFTFGGLLS ELLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL
        GAQLQGLSVKNGLF + AIVGT +LG+Y RDGCFEEALRV EDMC KSL TWNSILSLLGR+QLVD                              + DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQ LH                                                    G KVNRPEIALELFYSMA+NGL PTQ SFVNAVNSCSCLGS
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKT+RYALESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

A0A6J1C0G3 pentatricopeptide repeat-containing protein At3g58590-like1.4e-9758.38Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        +PLHA+TITMGPVPNQ IFVHNNL+FQYSS GML VA NLFD+MPHRN VSYNT+ISAYSR G V EAW LFSEMRDCGFV TQFTFGGLLSAELLD WQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL
        G QLQ LSVKNGLFDADAIVGT ++ +Y R GCF+EAL VF DM  KSL TWN IL+LLGR+QLV+                              + DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVD------------------------------DYDL

Query:  KFGQQLHG----------------------------------------------------AKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQQLHG                                                     KV +PEIALELFY M+ +GLIPTQ SFVN V SCSCL S
Subjt:  KFGQQLHG----------------------------------------------------AKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSK IR+ALESDV+VGT+L+ FY KF+
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

A0A6J1G5W7 pentatricopeptide repeat-containing protein At3g585904.0e-10863.47Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        +PLHALTITMGPVPNQ IFVHNNL+FQYSS+G+LL+A NLFDEMPHRNVVSYNTIISAYSRRG VKEAWDLFSEMR+CGFVPTQFTFGGLLSA+LLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL
        GAQLQGLSVKNG+FDADAIVGT +LG+Y R+GCFEEALRVFEDM  KSL TWNSILSLLGRSQLVD+                               DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQQLH                                                    G KV++PE+ALELFY+M   GLIPTQ SFVN V+SCS + S
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKTIR A ESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

A0A6J1I2K3 pentatricopeptide repeat-containing protein At3g585902.0e-10763.47Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        +PLHA TITMGPVPNQ IFV NNL+FQYSS+G+LL+A NLFDEMPHRNVVSYNTIISAYSRRG VKEAWDLFSEMRDCGFVPTQFTFGGLLSA+LLDVWQ
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL
        GAQLQGLSVKNG+FDADAIVGT +LG+Y R+GCFEEALRVFEDM  KSL TWNSILSLLGRSQLVD+                               DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
        KFGQQLH                                                    G KV++PE+ALE FYSM   GLIPTQ SFVN VNSCS + S
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK
        SIYG+YFHSKTIR A ESDVFVGT LIDFY KFK
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFK

SwissProt top hitse value%identityAlignment
O04659 Pentatricopeptide repeat-containing protein At5g271103.2e-2529.2Show/hide
Query:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSA--ELLDVWQ
        +H L +  G V +  + V ++L+  Y+   +   +  +FDEMP R+V S+NT+IS + + G  ++A +LF  M   GF P   +    +SA   LL + +
Subjt:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSA--ELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI
        G ++    VK G F+ D  V + ++ MY +  C E A  VF+ M  KSL  WNS         ++  Y  K             +  +E+   M   G  
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI

Query:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTK
        P+QT+  + + +CS   + ++G++ H   IR  + +D++V  +LID Y K
Subjt:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTK

Q0WN01 Pentatricopeptide repeat-containing protein At3g585901.3e-4234.64Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        K LHAL+IT+  V  Q ++V NN++  Y  +G + +A  +FD+MP RN VS+NTII  YS+ G V +AW +FSEMR  G++P Q T  GLLS   LDV  
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL
        G QL GLS+K GLF ADA VGT +L +Y R    E A +VFEDM  KSL TWN ++SLLG    + +                               DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
           +QLH                                                     AK   P  AL+LF SM  +G  P Q ++V+ +   S +  
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTK
           G+  H   I+   E+ + +G  LIDFY K
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTK

Q9FLX6 Pentatricopeptide repeat-containing protein At5g52850, chloroplastic3.0e-2329.12Show/hide
Query:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLL--SAELLDVWQ
        +H   I  G + N  + + NNLL  Y     +  A  LFDEM HR V ++  +ISA+++      A  LF EM   G  P +FTF  ++   A L D+  
Subjt:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLL--SAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI
        G ++ G  +K G F+ +++VG+++  +Y + G F+EA  +F  +      +W  ++S                  L GA+  R   AL+ +  M   G+ 
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI

Query:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFKSWSKPVIAL
        P + +FV  + + S LG   +G+  HS  I   +  +V + T+L+DFY++F      V  L
Subjt:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFKSWSKPVIAL

Q9LRV9 Pentatricopeptide repeat-containing protein At3g138801.6e-2429.37Show/hide
Query:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQGA
        LH L +  G   +Q +F+ N L+  YS  G L  A +LFD    R+ VS+N++IS Y R G+ +E  +L ++M   G   T +  G +L A  +++ +G 
Subjt:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQGA

Query:  QLQGLSV-----KNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILS-LLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS
          +G+++     K G+ + D +V T +L MY ++G  +EA+++F  M  K++ T+N+++S  L   ++ D+   +               A +LF  M  
Subjt:  QLQGLSV-----KNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILS-LLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS

Query:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY
         GL P+ ++F   + +CS   +  YG+  H+   +   +SD F+G+ LI+ Y
Subjt:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY

Q9SCT2 Pentatricopeptide repeat-containing protein At3g504209.2e-2531.75Show/hide
Query:  KPLHALTITMGP-VPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGS-VKEAWDLFSEMRDCGFVPTQFTFGGLLS--AELL
        + +HAL +T G     +  + +NNL+  Y   G L  A  +FD+MPHRNVVSYN + SAYSR       A+ L + M      P   TF  L+   A L 
Subjt:  KPLHALTITMGP-VPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGS-VKEAWDLFSEMRDCGFVPTQFTFGGLLS--AELL

Query:  DVWQGAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS
        DV  G+ L    +K G  D + +V T++LGMY   G  E A R+F+ +  +    WN+++                   +   K ++ E  L  F +M  
Subjt:  DVWQGAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS

Query:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY
        +G+ PTQ ++   +N CS LGS   G+  H++ I     +D+ +   L+D Y
Subjt:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY

Arabidopsis top hitse value%identityAlignment
AT3G13880.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.1e-2529.37Show/hide
Query:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQGA
        LH L +  G   +Q +F+ N L+  YS  G L  A +LFD    R+ VS+N++IS Y R G+ +E  +L ++M   G   T +  G +L A  +++ +G 
Subjt:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQGA

Query:  QLQGLSV-----KNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILS-LLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS
          +G+++     K G+ + D +V T +L MY ++G  +EA+++F  M  K++ T+N+++S  L   ++ D+   +               A +LF  M  
Subjt:  QLQGLSV-----KNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILS-LLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS

Query:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY
         GL P+ ++F   + +CS   +  YG+  H+   +   +SD F+G+ LI+ Y
Subjt:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY

AT3G50420.1 Pentatricopeptide repeat (PPR) superfamily protein6.5e-2631.75Show/hide
Query:  KPLHALTITMGP-VPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGS-VKEAWDLFSEMRDCGFVPTQFTFGGLLS--AELL
        + +HAL +T G     +  + +NNL+  Y   G L  A  +FD+MPHRNVVSYN + SAYSR       A+ L + M      P   TF  L+   A L 
Subjt:  KPLHALTITMGP-VPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGS-VKEAWDLFSEMRDCGFVPTQFTFGGLLS--AELL

Query:  DVWQGAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS
        DV  G+ L    +K G  D + +V T++LGMY   G  E A R+F+ +  +    WN+++                   +   K ++ E  L  F +M  
Subjt:  DVWQGAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMAS

Query:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY
        +G+ PTQ ++   +N CS LGS   G+  H++ I     +D+ +   L+D Y
Subjt:  NGLIPTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFY

AT3G58590.1 Pentatricopeptide repeat (PPR) superfamily protein9.1e-4434.64Show/hide
Query:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ
        K LHAL+IT+  V  Q ++V NN++  Y  +G + +A  +FD+MP RN VS+NTII  YS+ G V +AW +FSEMR  G++P Q T  GLLS   LDV  
Subjt:  KPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL
        G QL GLS+K GLF ADA VGT +L +Y R    E A +VFEDM  KSL TWN ++SLLG    + +                               DL
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDD------------------------------YDL

Query:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS
           +QLH                                                     AK   P  AL+LF SM  +G  P Q ++V+ +   S +  
Subjt:  KFGQQLH----------------------------------------------------GAKVNRPEIALELFYSMASNGLIPTQTSFVNAVNSCSCLGS

Query:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTK
           G+  H   I+   E+ + +G  LIDFY K
Subjt:  SIYGQYFHSKTIRYALESDVFVGTTLIDFYTK

AT5G27110.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-2629.2Show/hide
Query:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSA--ELLDVWQ
        +H L +  G V +  + V ++L+  Y+   +   +  +FDEMP R+V S+NT+IS + + G  ++A +LF  M   GF P   +    +SA   LL + +
Subjt:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSA--ELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI
        G ++    VK G F+ D  V + ++ MY +  C E A  VF+ M  KSL  WNS         ++  Y  K             +  +E+   M   G  
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI

Query:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTK
        P+QT+  + + +CS   + ++G++ H   IR  + +D++V  +LID Y K
Subjt:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTK

AT5G52850.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-2429.12Show/hide
Query:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLL--SAELLDVWQ
        +H   I  G + N  + + NNLL  Y     +  A  LFDEM HR V ++  +ISA+++      A  LF EM   G  P +FTF  ++   A L D+  
Subjt:  LHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLL--SAELLDVWQ

Query:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI
        G ++ G  +K G F+ +++VG+++  +Y + G F+EA  +F  +      +W  ++S                  L GA+  R   AL+ +  M   G+ 
Subjt:  GAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI

Query:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFKSWSKPVIAL
        P + +FV  + + S LG   +G+  HS  I   +  +V + T+L+DFY++F      V  L
Subjt:  PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFKSWSKPVIAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCAAGGCTCCTTCACTCAAAACCACAAACCCCTTCATGCTCTCACAATTACAATGGGTCCTGTTCCGAATCAGGGCATTTTTGTGCATAATAATCTCTTG
TTCCAATATTCTTCTATTGGGATGTTATTGGTGGCACATAATCTGTTCGACGAAATGCCCCACCGAAATGTTGTGTCTTATAACACGATAATTAGTGCTTATAGC
CGACGTGGGTCTGTGAAGGAAGCGTGGGATTTGTTTTCGGAGATGAGAGATTGTGGTTTTGTACCGACCCAATTCACATTTGGTGGGTTATTGTCGGCGGAATTG
TTGGATGTTTGGCAGGGTGCTCAGTTGCAGGGGTTATCGGTTAAAAACGGACTGTTTGATGCTGATGCTATTGTGGGAACGACCATGTTGGGGATGTACGACAGA
GATGGATGCTTTGAGGAAGCTCTACGGGTTTTTGAAGATATGTGTTGCAAAAGTTTGGCGACATGGAATTCGATATTGTCATTACTTGGTCGCAGCCAACTTGTG
GATGACTATGACTTGAAATTTGGGCAACAGTTACATGGGGCAAAAGTCAATAGACCTGAAATAGCATTAGAACTCTTTTACAGTATGGCATCAAATGGGCTAATT
CCTACACAGACATCATTTGTAAACGCTGTCAACTCTTGTAGTTGTCTGGGAAGTTCAATTTATGGACAATATTTTCACTCAAAAACAATTCGTTATGCTTTGGAG
TCTGATGTATTTGTGGGTACTACTTTGATTGACTTTTACACCAAGTTCAAAAGTTGGAGTAAGCCCGTTATTGCTTTGATGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCCAAGGCTCCTTCACTCAAAACCACAAACCCCTTCATGCTCTCACAATTACAATGGGTCCTGTTCCGAATCAGGGCATTTTTGTGCATAATAATCTCTTG
TTCCAATATTCTTCTATTGGGATGTTATTGGTGGCACATAATCTGTTCGACGAAATGCCCCACCGAAATGTTGTGTCTTATAACACGATAATTAGTGCTTATAGC
CGACGTGGGTCTGTGAAGGAAGCGTGGGATTTGTTTTCGGAGATGAGAGATTGTGGTTTTGTACCGACCCAATTCACATTTGGTGGGTTATTGTCGGCGGAATTG
TTGGATGTTTGGCAGGGTGCTCAGTTGCAGGGGTTATCGGTTAAAAACGGACTGTTTGATGCTGATGCTATTGTGGGAACGACCATGTTGGGGATGTACGACAGA
GATGGATGCTTTGAGGAAGCTCTACGGGTTTTTGAAGATATGTGTTGCAAAAGTTTGGCGACATGGAATTCGATATTGTCATTACTTGGTCGCAGCCAACTTGTG
GATGACTATGACTTGAAATTTGGGCAACAGTTACATGGGGCAAAAGTCAATAGACCTGAAATAGCATTAGAACTCTTTTACAGTATGGCATCAAATGGGCTAATT
CCTACACAGACATCATTTGTAAACGCTGTCAACTCTTGTAGTTGTCTGGGAAGTTCAATTTATGGACAATATTTTCACTCAAAAACAATTCGTTATGCTTTGGAG
TCTGATGTATTTGTGGGTACTACTTTGATTGACTTTTACACCAAGTTCAAAAGTTGGAGTAAGCCCGTTATTGCTTTGATGAGATAG
Protein sequenceShow/hide protein sequence
MFQGSFTQNHKPLHALTITMGPVPNQGIFVHNNLLFQYSSIGMLLVAHNLFDEMPHRNVVSYNTIISAYSRRGSVKEAWDLFSEMRDCGFVPTQFTFGGLLSAEL
LDVWQGAQLQGLSVKNGLFDADAIVGTTMLGMYDRDGCFEEALRVFEDMCCKSLATWNSILSLLGRSQLVDDYDLKFGQQLHGAKVNRPEIALELFYSMASNGLI
PTQTSFVNAVNSCSCLGSSIYGQYFHSKTIRYALESDVFVGTTLIDFYTKFKSWSKPVIALMR