| GenBank top hits | e value | %identity | Alignment |
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| KAG6604740.1 hypothetical protein SDJN03_02057, partial [Cucurbita argyrosperma subsp. sororia] | 1.2e-110 | 88.19 | Show/hide |
Query: SCRAAAWQPEKEVMYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIER
S + AWQPEKE MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENT V ER
Subjt: SCRAAAWQPEKEVMYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIER
Query: MQQKRVAFRWIQLYEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWR
MQ+K+VAFRWIQLYEAKMKDIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSF G GYG NV NTKNKLLKK+KIEVLQSQEMKNIKAWR
Subjt: MQQKRVAFRWIQLYEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWR
Query: RNAVQKSPDIPSTKKPMYSGRDSASTSKNTTTYMARR
RNAVQK+ DIPSTKKPM+SGRDSASTSK+TTT+MAR+
Subjt: RNAVQKSPDIPSTKKPMYSGRDSASTSKNTTTYMARR
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| TYJ98274.1 transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa] | 7.3e-111 | 92.41 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKS DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+ GR+SASTSKNT+T+MA+R
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| XP_004143189.1 transcription elongation factor B polypeptide 3 isoform X1 [Cucumis sativus] | 2.1e-110 | 92.41 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLL+RILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKS DI ST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+SGR+SASTSKNT+T+MA+R
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| XP_008456387.2 PREDICTED: transcription elongation factor B polypeptide 3 isoform X1 [Cucumis melo] | 7.3e-111 | 92.41 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKS DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+ GR+SASTSKNT+T+MA+R
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| XP_016901950.1 PREDICTED: transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo] | 7.3e-111 | 92.41 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKS DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+ GR+SASTSKNT+T+MA+R
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C4D6 transcription elongation factor B polypeptide 3 isoform X1 | 3.5e-111 | 92.41 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKS DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+ GR+SASTSKNT+T+MA+R
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| A0A1S4E1U0 transcription elongation factor B polypeptide 3 isoform X2 | 3.5e-111 | 92.41 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKS DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+ GR+SASTSKNT+T+MA+R
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| A0A5D3BGR1 Transcription elongation factor B polypeptide 3 isoform X2 | 3.5e-111 | 92.41 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MYRVRKIPSLVDLCVNKAIDN+RFLGDVGETDIHLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFG+E+T TVIERM+QKRVAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKM+DIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGG+GYG NVANTKNK+LKKAKIEVLQSQEMKNIKAWRRNAVQKS DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+ GR+SASTSKNT+T+MA+R
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| A0A6J1G8W9 transcription elongation factor B polypeptide 3 isoform X1 | 5.3e-107 | 89.73 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENT V ERMQ+K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKMKDIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG GYG NV NTKNKLLKK+KIEVLQSQEMKNIKAWRRNAVQK+ DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+SGRDSASTSK+TTT+MAR+
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| A0A6J1I1I3 transcription elongation factor B polypeptide 3 isoform X1 | 2.0e-106 | 89.29 | Show/hide |
Query: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
MY VRK+PSLVDLCV KAIDNLRFLGDVGETD+HLLERILPHCTV+QLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRE+T V ERMQ+K+VAFRWIQL
Subjt: MYRVRKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRVAFRWIQL
Query: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
YEAKMKDIEKNES+AADRIKQSYLKENARKQSRQIQICSKVPP+SNKRSFG GYG NV NTKNKLLKK+KIEVLQSQEMKNIKAWRRNAVQK+ DIPST
Subjt: YEAKMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSFGGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPST
Query: KKPMYSGRDSASTSKNTTTYMARR
KKPM+SGRDSASTSK+TTT+MAR+
Subjt: KKPMYSGRDSASTSKNTTTYMARR
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G42780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684); Has 187 Blast hits to 186 proteins in 77 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 29; Plants - 38; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). | 2.9e-49 | 46.05 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LLE+IL HCT+EQL H+E +++ DL+P+TDK WK FY++ +G E+ +IE ++ +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRV-AFRWIQLYEA
Query: KMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDI-----
K+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G + G N+ + K+ ++KKAKI++L+SQE+KN+ A +RN +QKS I
Subjt: KMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDI-----
Query: -------PSTKKPM-YSGRDSASTSKNT
PST + + Y GR+ T KNT
Subjt: -------PSTKKPM-YSGRDSASTSKNT
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| AT2G42780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: integral to membrane, nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: RNA polymerase II transcription factor SIII, subunit A (InterPro:IPR010684). | 3.2e-48 | 46.73 | Show/hide |
Query: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRV-AFRWIQLYEA
+K PSLVDLCV KAIDN++++G VG D LLE+IL HCT+EQL H+E +++ DL+P+TDK WK FY++ +G E+ +IE ++ +V F+W LYE
Subjt: RKIPSLVDLCVNKAIDNLRFLGDVGETDIHLLERILPHCTVEQLMHVEKSSEGRDLTPVTDKLWKKFYERQFGRENTITVIERMQQKRV-AFRWIQLYEA
Query: KMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPSTKK
K+ +++ E + R+K+ Y EN RKQSRQ ++CSK PPS KR F G + G N+ + K+ ++KKAKI++L+SQE+KN+ A +RN +QKS I + K+
Subjt: KMKDIEKNESKAADRIKQSYLKENARKQSRQIQICSKVPPSSNKRSF-GGTGYGCNVANTKNKLLKKAKIEVLQSQEMKNIKAWRRNAVQKSPDIPSTKK
Query: PMYSGRDSASTSKN
S ++ STS++
Subjt: PMYSGRDSASTSKN
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