; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009727 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009727
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationchr9:41783753..41784104
RNA-Seq ExpressionLag0009727
SyntenyLag0009727
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7015065.1 unnamed protein product [Microthlaspi erraticum]2.5e-0740.85Show/hide
Query:  TSDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAE
        +S  W+IDSGA+ H+C+ R  F  + S    +V+LP    IAI+ IG V+LN +++L+ND +   MIG+ +
Subjt:  TSDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAE

CAE5963143.1 unnamed protein product [Arabidopsis arenosa]7.3e-0744.62Show/hide
Query:  WVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGK
        W+IDSGA+ H+C +   F  + S++  TV LPN  KIAI   G V+L+  +LL+N+ +   MIGK
Subjt:  WVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGK

MCH79266.1 polynucleotidyl transferase Ribonuclease H fold [Trifolium medium]7.3e-0737.84Show/hide
Query:  SDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG
        S  W+ DSGA+ HIC S H+F S   +  ++V+LPN   + + + G+VQ   ++ L++D  S RMIG  +   G
Subjt:  SDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG

XP_022856063.1 uncharacterized protein LOC111377235, partial [Olea europaea var. sylvestris]9.5e-0743.64Show/hide
Query:  WVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQN
        WV+DSGA++HIC+S+  F S+K +    V+LPNH++I + F+G V+ ++N++L++
Subjt:  WVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQN

XP_033142562.1 uncharacterized protein LOC117132479 [Brassica rapa]2.7e-0944.3Show/hide
Query:  MSTFPTSDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQ
        +S    SD W+IDSGA+ H+C   + FT+  SV G+TVSLPN     I  IG V ++S+I+LQN+     MIG+ +  Q
Subjt:  MSTFPTSDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQ

TrEMBL top hitse value%identityAlignment
A0A2N9FYL4 Patatin6.0e-0739.51Show/hide
Query:  MSTFPTSDCWVIDSGASAHICYSRHFFTSLK-SVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG
        +S+F T   WV+DSGASAH+C+ R  F++L+     ++V LPN   ++I  IG   L+  ++L ND  S+R+IG  +   G
Subjt:  MSTFPTSDCWVIDSGASAHICYSRHFFTSLK-SVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG

A0A2N9GJY5 Uncharacterized protein9.2e-0840.85Show/hide
Query:  WVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG
        WVID+GA+ H+  + H+FT++K V  +TV+LPN + + +  IG +QL +++LL +D    RMIG      G
Subjt:  WVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG

A0A2N9HPX8 CCHC-type domain-containing protein6.0e-0739.51Show/hide
Query:  MSTFPTSDCWVIDSGASAHICYSRHFFTSLK-SVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG
        +S+F T   WV+DSGASAH+C+ R  F++L+     ++V LPN   ++I  IG   L+  ++L ND  S+R+IG  +   G
Subjt:  MSTFPTSDCWVIDSGASAHICYSRHFFTSLK-SVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG

A0A392LWC2 Polynucleotidyl transferase Ribonuclease H fold (Fragment)3.5e-0737.84Show/hide
Query:  SDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG
        S  W+ DSGA+ HIC S H+F S   +  ++V+LPN   + + + G+VQ   ++ L++D  S RMIG  +   G
Subjt:  SDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQG

A0A6D2HID8 Integrase catalytic domain-containing protein1.2e-0740.85Show/hide
Query:  TSDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAE
        +S  W+IDSGA+ H+C+ R  F  + S    +V+LP    IAI+ IG V+LN +++L+ND +   MIG+ +
Subjt:  TSDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTTTTCCTACTTCTGATTGTTGGGTGATTGATTCGGGCGCTTCTGCCCATATCTGCTATTCTCGTCACTTCTTTACTTCGCTAAAATCAGTAACTGGAATGAC
TGTGTCTCTGCCGAACCATGAGAAAATTGCTATTGACTTCATTGGTGATGTGCAACTTAATTCTAATATTCTCCTGCAAAACGACAAGTCCTCTTCGAGGATGATTGGCA
AGGCTGAGTCTTGGCAGGGCTGTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTTTTCCTACTTCTGATTGTTGGGTGATTGATTCGGGCGCTTCTGCCCATATCTGCTATTCTCGTCACTTCTTTACTTCGCTAAAATCAGTAACTGGAATGAC
TGTGTCTCTGCCGAACCATGAGAAAATTGCTATTGACTTCATTGGTGATGTGCAACTTAATTCTAATATTCTCCTGCAAAACGACAAGTCCTCTTCGAGGATGATTGGCA
AGGCTGAGTCTTGGCAGGGCTGTACTTGA
Protein sequenceShow/hide protein sequence
MSTFPTSDCWVIDSGASAHICYSRHFFTSLKSVTGMTVSLPNHEKIAIDFIGDVQLNSNILLQNDKSSSRMIGKAESWQGCT