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Lag0009754 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009754
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:42000035..42001142
RNA-Seq ExpressionLag0009754
SyntenyLag0009754
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7802400.1 uncharacterized protein G2W53_041511 [Senna tora]8.6e-1934.55Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        W+PP    LKLNVDASVR D G+   GC++R   G    A   ++  C+SV++AE  AVY+G+ +A+++  ++ +VE DS  ++K+L+G   D + V  +
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVD-----RVWLEEGPSEISDVLRCDVVS
        + D+  +   + +    +  R+ NKVAH LA    ++        VWLE+ PS I + L+ D+++
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVD-----RVWLEEGPSEISDVLRCDVVS

XP_021716820.1 uncharacterized protein LOC110684687 [Chenopodium quinoa]3.9e-1937.04Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        W+PP  G +K+N DA++  D    G G V+R A GEV +A CL L+  + VD+AE  A+   +++A +  F    +ETD +++   L  G    + +G +
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVD-RVWLEEGPSEISDVLRCDVVSS
        ++D+  + +   +    F  R GN  AHALA L  SY D RVW+EE PSEIS  +  D+ S+
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVD-RVWLEEGPSEISDVLRCDVVSS

XP_021809818.1 uncharacterized protein LOC110753261 [Prunus avium]1.3e-1938.65Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVK-ILHGGIQDVSEVGR
        W PPP G  KLNVDA+  P+TG +G G V+R   GEV  A  L L    S   AE  A+  G+  AR  GF  F++E+DS  +V  +     +  +  G 
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVK-ILHGGIQDVSEVGR

Query:  LMDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDRV-WLEEGPSEISDVLRCDVVSS
        L+DD++  LQ ++   + FSPR+ N+VAH LA    +  + V W+EE P  +  V+  D+V S
Subjt:  LMDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDRV-WLEEGPSEISDVLRCDVVSS

XP_021841246.1 uncharacterized protein LOC110781352 [Spinacia oleracea]8.6e-1933.76Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        W PP  G LK+NVD ++  D G AG G ++R  +G V  AACL +   W V + E  ++  G++LA Q G  D VVE+D L+++K+++G I+D   +G +
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDRVWLEEGPSEISDVLRCD
          ++R +   +D+   +   R+ N   H +A  +  +  RVW+   PS + D++  D
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDRVWLEEGPSEISDVLRCD

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]2.0e-2341.88Show/hide
Query:  VWRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGR
        +WRPP A  LK+NVDA+ R ++  AG G ++R + G V++ A   L R   VD  EG+AVY+G+ LA + GF+ F +ETDSLR+  +L     D SEVG 
Subjt:  VWRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGR

Query:  LMDDVRMMLQPW-DNNKVLFSPRQGNKVAHALASLVFSYVD-RVWLEEGPSEISDVLRCD
        L   +++ L    +     F+ R GN  AH LA L  +    ++W+EE P EIS VL  D
Subjt:  LMDDVRMMLQPW-DNNKVLFSPRQGNKVAHALASLVFSYVD-RVWLEEGPSEISDVLRCD

TrEMBL top hitse value%identityAlignment
A0A251NT15 RNase H domain-containing protein4.2e-1936.65Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        W  PP+G LK N D +  P +G    G V R ADG    A    +    S + AE  A  +GV LA  LG    + E DS  +V  +    QD S +G +
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDR-VWLEEGPSEISDVLRCDVVS
        ++DV+ + Q + ++   F+PR+ N VAH LA      VD  +W E  P  I D L CDV+S
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDR-VWLEEGPSEISDVLRCDVVS

A0A6J1DBJ7 uncharacterized protein LOC1110189739.6e-2441.88Show/hide
Query:  VWRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGR
        +WRPP A  LK+NVDA+ R ++  AG G ++R + G V++ A   L R   VD  EG+AVY+G+ LA + GF+ F +ETDSLR+  +L     D SEVG 
Subjt:  VWRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGR

Query:  LMDDVRMMLQPW-DNNKVLFSPRQGNKVAHALASLVFSYVD-RVWLEEGPSEISDVLRCD
        L   +++ L    +     F+ R GN  AH LA L  +    ++W+EE P EIS VL  D
Subjt:  LMDDVRMMLQPW-DNNKVLFSPRQGNKVAHALASLVFSYVD-RVWLEEGPSEISDVLRCD

A0A6P5S7Q3 uncharacterized protein LOC1107532616.4e-2038.65Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVK-ILHGGIQDVSEVGR
        W PPP G  KLNVDA+  P+TG +G G V+R   GEV  A  L L    S   AE  A+  G+  AR  GF  F++E+DS  +V  +     +  +  G 
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVK-ILHGGIQDVSEVGR

Query:  LMDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDRV-WLEEGPSEISDVLRCDVVSS
        L+DD++  LQ ++   + FSPR+ N+VAH LA    +  + V W+EE P  +  V+  D+V S
Subjt:  LMDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDRV-WLEEGPSEISDVLRCDVVSS

M5VU98 Reverse transcriptase domain-containing protein4.2e-1936.65Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        W  PP+G LK N D +  P +G    G V R ADG    A    +    S + AE  A  +GV LA  LG    + E DS  +V  +    QD S +G +
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDR-VWLEEGPSEISDVLRCDVVS
        ++DV+ + Q + ++   F+PR+ N VAH LA      VD  +W E  P  I D L CDV+S
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDR-VWLEEGPSEISDVLRCDVVS

M5WEH8 RNase H domain-containing protein (Fragment)4.2e-1936.65Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        W  PP+G LK N D +  P +G    G V R ADG    A    +    S + AE  A  +GV LA  LG    + E DS  +V  +    QD S +G +
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDR-VWLEEGPSEISDVLRCDVVS
        ++DV+ + Q + ++   F+PR+ N VAH LA      VD  +W E  P  I D L CDV+S
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDR-VWLEEGPSEISDVLRCDVVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-0829.08Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        W+ PP   +K N DA+ + +    G G +LR   G V       L R  +V  AE  A+   V    +  +   + E+D+  LV +L+        +   
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALA--SLVFSYVD
        ++D++ +L  ++  K  F+PR GNKVA  +A  S+ FS  D
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALA--SLVFSYVD

AT3G09510.1 Ribonuclease H-like superfamily protein1.9e-0827.46Show/hide
Query:  EDRCVWRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVS
        E++  WR PPA  +K N DA       EA GG ++R   G       + L    +   AE  A+   +Q     G+    +E D   L+ +++ GI   S
Subjt:  EDRCVWRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVS

Query:  EVGRLMDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSY
         +   ++D+      + + +  F  R+GNK+AH LA    +Y
Subjt:  EVGRLMDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSY

AT4G29090.1 Ribonuclease H-like superfamily protein2.3e-0930.22Show/hide
Query:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL
        WRPPP   +K N DA+   D    G G VLR   GEV       L +  SV  AE  A+   V    +  +   + E+DS  L++IL+   +    +   
Subjt:  WRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLRLVKILHGGIQDVSEVGRL

Query:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVD
        + D++ +L  +   K +F PR+GN +A  +A    S+++
Subjt:  MDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGGAGGGAGAGCAAACGAAGGCGCTCCCTTAAGCCTCCACAAACGTGCCCGACTAGGGGACCAGGAGGATCGCTGTGTGTGGAGGCCACCTCCTGCTGGGGAGTT
GAAGTTGAATGTTGATGCCTCTGTCAGGCCTGATACAGGGGAGGCTGGGGGTGGCTGTGTACTGCGGGGGGCTGACGGGGAGGTCTTCATGGCGGCCTGCCTGGACTTGC
AGAGGTGTTGGAGTGTGGATTTGGCTGAGGGTTGGGCTGTGTATAAGGGGGTCCAGCTTGCTCGACAGTTGGGGTTTGTTGATTTTGTGGTGGAAACCGACTCTCTGAGG
TTGGTTAAAATTCTTCATGGTGGTATTCAGGATGTTTCGGAAGTAGGGCGACTGATGGATGATGTTCGAATGATGCTCCAGCCTTGGGACAATAACAAGGTTTTGTTTTC
TCCACGCCAGGGAAACAAGGTGGCGCATGCTCTTGCTAGCTTAGTCTTTTCTTATGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGAAATTTCTGATGTTCTAAGGT
GTGATGTTGTGTCTTCCCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACGGAGGGAGAGCAAACGAAGGCGCTCCCTTAAGCCTCCACAAACGTGCCCGACTAGGGGACCAGGAGGATCGCTGTGTGTGGAGGCCACCTCCTGCTGGGGAGTT
GAAGTTGAATGTTGATGCCTCTGTCAGGCCTGATACAGGGGAGGCTGGGGGTGGCTGTGTACTGCGGGGGGCTGACGGGGAGGTCTTCATGGCGGCCTGCCTGGACTTGC
AGAGGTGTTGGAGTGTGGATTTGGCTGAGGGTTGGGCTGTGTATAAGGGGGTCCAGCTTGCTCGACAGTTGGGGTTTGTTGATTTTGTGGTGGAAACCGACTCTCTGAGG
TTGGTTAAAATTCTTCATGGTGGTATTCAGGATGTTTCGGAAGTAGGGCGACTGATGGATGATGTTCGAATGATGCTCCAGCCTTGGGACAATAACAAGGTTTTGTTTTC
TCCACGCCAGGGAAACAAGGTGGCGCATGCTCTTGCTAGCTTAGTCTTTTCTTATGTTGACCGTGTTTGGCTTGAAGAAGGGCCTAGCGAAATTTCTGATGTTCTAAGGT
GTGATGTTGTGTCTTCCCTGTGA
Protein sequenceShow/hide protein sequence
MNGGRANEGAPLSLHKRARLGDQEDRCVWRPPPAGELKLNVDASVRPDTGEAGGGCVLRGADGEVFMAACLDLQRCWSVDLAEGWAVYKGVQLARQLGFVDFVVETDSLR
LVKILHGGIQDVSEVGRLMDDVRMMLQPWDNNKVLFSPRQGNKVAHALASLVFSYVDRVWLEEGPSEISDVLRCDVVSSL