; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009756 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009756
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNase H domain-containing protein
Genome locationchr9:42014151..42014459
RNA-Seq ExpressionLag0009756
SyntenyLag0009756
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7819670.1 uncharacterized protein G2W53_025125 [Senna tora]1.2e-0631.31Show/hide
Query:  MLTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE
        ++ + K  +    VD LEA+ + + L++AK    L +EVE DSA+V  ++     D S +G+++++I ++S    F S  W RRE N + H+     +E
Subjt:  MLTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE

KAF7835887.1 uncharacterized protein G2W53_010746 [Senna tora]6.5e-0529.29Show/hide
Query:  MLTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE
        +  + K    +  VD +EA+ + D L++AK    L +EVE DSA V  ++     D S +G+++++I  +S      S  W RRE N + H+   + ++
Subjt:  MLTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE

KQK16265.2 hypothetical protein BRADI_1g27874v3 [Brachypodium distachyon]7.2e-0430.43Show/hide
Query:  VQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE
        ++ V D    EA+ + D LL+A + G  RLE+ +D   V   +    K      V+ +E + + +G  F S++ C RE+NL+ H   RQ ++
Subjt:  VQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE

XP_022150944.1 uncharacterized protein LOC111018973 [Momordica charantia]1.4e-0434.69Show/hide
Query:  LTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQ-ISKGLLFCSMSWCRREANLMVHMATRQVL
        LT ++L+    DVD +E   + + +L+A EAGF+R ++ETDS R+  ++ ++  D SEVGVL   I   +S      S S+  R  N   H+  +  L
Subjt:  LTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQ-ISKGLLFCSMSWCRREANLMVHMATRQVL

TrEMBL top hitse value%identityAlignment
A0A0Q3KYN3 RNase H domain-containing protein3.5e-0430.43Show/hide
Query:  VQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE
        ++ V D    EA+ + D LL+A + G  RLE+ +D   V   +    K      V+ +E + + +G  F S++ C RE+NL+ H   RQ ++
Subjt:  VQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLE

A0A6J1DBJ7 uncharacterized protein LOC1110189737.0e-0534.69Show/hide
Query:  LTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQ-ISKGLLFCSMSWCRREANLMVHMATRQVL
        LT ++L+    DVD +E   + + +L+A EAGF+R ++ETDS R+  ++ ++  D SEVGVL   I   +S      S S+  R  N   H+  +  L
Subjt:  LTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQ-ISKGLLFCSMSWCRREANLMVHMATRQVL

A0A803LHG6 Uncharacterized protein7.7e-0431.65Show/hide
Query:  DVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVH
        DVD +EAM +  +L +A E+GF+RL +ETD+ ++ + ++ ++ D +  G++V++I  ++     C   + +RE N + H
Subjt:  DVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTACCTTGATGAAATTGGTCCAATATGTGCAGGATGTGGACGCGTTGGAGGCAATGACGATCTGCGATAGTCTGTTAGTTGCTAAAGAAGCTGGTTTCTTGAGACT
GGAGGTGGAGACTGATTCAGCTCGTGTGGCGACCATGATTCGGTCAAATCAGAAGGACTGCTCTGAGGTTGGAGTTCTGGTGCAAGAGATCAATCAGATCTCGAAGGGCT
TGTTGTTCTGCTCCATGAGTTGGTGTCGAAGGGAGGCTAATCTAATGGTGCATATGGCGACGCGTCAGGTGCTGGAGCTCGGAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTACCTTGATGAAATTGGTCCAATATGTGCAGGATGTGGACGCGTTGGAGGCAATGACGATCTGCGATAGTCTGTTAGTTGCTAAAGAAGCTGGTTTCTTGAGACT
GGAGGTGGAGACTGATTCAGCTCGTGTGGCGACCATGATTCGGTCAAATCAGAAGGACTGCTCTGAGGTTGGAGTTCTGGTGCAAGAGATCAATCAGATCTCGAAGGGCT
TGTTGTTCTGCTCCATGAGTTGGTGTCGAAGGGAGGCTAATCTAATGGTGCATATGGCGACGCGTCAGGTGCTGGAGCTCGGAGTTTAG
Protein sequenceShow/hide protein sequence
MLTLMKLVQYVQDVDALEAMTICDSLLVAKEAGFLRLEVETDSARVATMIRSNQKDCSEVGVLVQEINQISKGLLFCSMSWCRREANLMVHMATRQVLELGV