; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009843 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009843
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWR1 complex subunit 6
Genome locationchr9:42796807..42798911
RNA-Seq ExpressionLag0009843
SyntenyLag0009843
Gene Ontology termsGO:0043486 - histone exchange (biological process)
GO:0000812 - Swr1 complex (cellular component)
GO:0031491 - nucleosome binding (molecular function)
InterPro domainsIPR007529 - Zinc finger, HIT-type
IPR039723 - Vps71/ZNHIT1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010486.1 SWR1 complex subunit 6, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-8495.93Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN+FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+ELIENIDDEDASLDDD+QAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGF+ASYTCIRCG+RFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

XP_022943643.1 SWR1 complex subunit 6 [Cucurbita moschata]1.4e-8495.93Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN+FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+ELIENIDDEDASLDDD+QAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGF+ASYTCIRCG+RFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

XP_022986949.1 SWR1 complex subunit 6 [Cucurbita maxima]2.4e-8495.35Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN+FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+ELIENIDDEDASLDDD+QAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSY+KAAVGPPSSTSRRHFCTVCGF+ASYTCIRCG+RFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

XP_023512985.1 SWR1 complex subunit 6 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-8495.93Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN+FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+ELIENIDDEDASLDDD+QAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGF+ASYTCIRCG+RFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

XP_038901863.1 SWR1 complex subunit 6 [Benincasa hispida]1.4e-8496.51Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN FRRMSSR RKVAPKMVAALASSDNRTQAALARLEALENDNAGVE +ENIDDEDASLDDD+QAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGF+ASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

TrEMBL top hitse value%identityAlignment
A0A0A0KH15 HIT-type domain-containing protein8.2e-8395.93Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVE++ENIDDEDASLDDDDQAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGF+ASYTCIRCGIRFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

A0A1S3CKL9 SWR1 complex subunit 65.3e-8294.77Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDD+TN FRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+E++ENIDDEDASLDDDDQAYI KRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEANLESLPPHVPSY KAAVGPPSSTSRRHFCTVCGF+ASYTCIRCGIRFCS RCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

A0A6J1D2Z0 SWR1 complex subunit 6 isoform X19.7e-8494.77Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN+FRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAG+EL+ENIDDEDASLDDDD AYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEANLESLPP+VPSYLKAAVGPPSS+SRRHFCTVCGF+A+YTCIRCG+RFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

A0A6J1FTL5 SWR1 complex subunit 66.7e-8595.93Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN+FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+ELIENIDDEDASLDDD+QAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGF+ASYTCIRCG+RFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

A0A6J1JHH9 SWR1 complex subunit 61.2e-8495.35Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
        MDDDATN+FRRMSSRTRKVAPKMVAALASSDNR+QAALARLEALENDNAG+ELIENIDDEDASLDDD+QAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFM

Query:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        ELLHEA+LESLPPHVPSY+KAAVGPPSSTSRRHFCTVCGF+ASYTCIRCG+RFCSCRCQNIHNDTRCLKFVA
Subjt:  ELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

SwissProt top hitse value%identityAlignment
O43257 Zinc finger HIT domain-containing protein 17.3e-1235.8Show/hide
Query:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAK-KAPKTFMELLHEANL
        ++ S R++    + V   A+   R      +LEALENDN         DD  A L    +   Q      T +K ++ +    K +  K F  LL E NL
Subjt:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAK-KAPKTFMELLHEANL

Query:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKF
               P+YL A  GPP S  +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKF

Q24JY4 Zinc finger HIT domain-containing protein 17.3e-1235.8Show/hide
Query:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAK-KAPKTFMELLHEANL
        ++ S R++    + V   A+   R      +LEALENDN         DD  A L    +   Q      T +K ++ +    K +  K F  LL E NL
Subjt:  RRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAK-KAPKTFMELLHEANL

Query:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKF
               P+YL A  GPP S  +R FC VCGF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  ESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKF

Q54NW0 Zinc finger HIT domain-containing protein 1 homolog2.7e-1432.35Show/hide
Query:  DDDATNAFRRMSSRTRKVAPKMVAALASSDNRT---QAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQ-SKGTKRKTRQAKALEAKKAPK
        D    N     SS+ +    K     +  D R    +   ARLE+L++DN    +    D+ED   +DD+   +     +K      R+ K  E K    
Subjt:  DDDATNAFRRMSSRTRKVAPKMVAALASSDNRT---QAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQ-SKGTKRKTRQAKALEAKKAPK

Query:  TFMELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRC
         F ++L ++ LE+ P HVP+Y+ +    PS    RHFC++CG+  +YTC +C  R+CS +C N HN+TRC
Subjt:  TFMELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRC

Q8R331 Zinc finger HIT domain-containing protein 15.1e-1340.15Show/hide
Query:  RLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAK-KAPKTFMELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVC
        +LEALENDN         DD  A L    +   Q      T +K ++ +    K +  K F  LL E NL +     P+YL A  GPP S  +R FC VC
Subjt:  RLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAK-KAPKTFMELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVC

Query:  GFSASYTCIRCGIRFCSCRCQNIHNDTRCLKF
        GF + YTC+ CG R+C+ RC   H +TRCLK+
Subjt:  GFSASYTCIRCGIRFCSCRCQNIHNDTRCLKF

Q9FHW2 SWR1 complex subunit 67.7e-6272.25Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLD-DDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTF
        M+++ +N  RR+S+RTRKVA KM AAL S+DNRTQAA+ARLEALENDN  +E+I+  DDE+ASLD DDD  Y+QK+Q KG+KRKTRQAKALEA+KAPK+F
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLD-DDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        +ELL EANLESLP HVP+YLKAAVGPPSS+SRR+FC+VCG+ A Y C  CG+RFCS RCQNIH DTRC KFVA
Subjt:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA

Arabidopsis top hitse value%identityAlignment
AT5G37055.1 HIT-type Zinc finger family protein5.5e-6372.25Show/hide
Query:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLD-DDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTF
        M+++ +N  RR+S+RTRKVA KM AAL S+DNRTQAA+ARLEALENDN  +E+I+  DDE+ASLD DDD  Y+QK+Q KG+KRKTRQAKALEA+KAPK+F
Subjt:  MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLD-DDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTF

Query:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA
        +ELL EANLESLP HVP+YLKAAVGPPSS+SRR+FC+VCG+ A Y C  CG+RFCS RCQNIH DTRC KFVA
Subjt:  MELLHEANLESLPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACGATGCTACGAATGCATTTCGGCGAATGTCGAGCCGCACTCGGAAGGTTGCTCCTAAGATGGTTGCTGCCCTTGCGAGTAGCGATAACCGCACTCAGGCAGC
CCTTGCTCGTCTTGAGGCATTGGAAAATGACAATGCGGGAGTGGAATTGATCGAAAACATCGACGACGAAGATGCCTCTCTCGACGATGATGATCAAGCATACATTCAGA
AGCGACAATCCAAGGGCACTAAGCGCAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAGGCTCCTAAAACTTTCATGGAGCTTCTGCACGAGGCAAATTTGGAGTCT
TTGCCTCCACATGTTCCATCATACTTAAAGGCTGCCGTTGGACCTCCAAGCTCTACCTCCCGTCGGCATTTCTGCACGGTTTGTGGTTTTTCTGCTAGCTACACGTGCAT
AAGGTGTGGAATTCGATTTTGTTCATGTCGTTGCCAGAATATACATAATGATACTCGTTGTTTGAAGTTTGTTGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGACGATGCTACGAATGCATTTCGGCGAATGTCGAGCCGCACTCGGAAGGTTGCTCCTAAGATGGTTGCTGCCCTTGCGAGTAGCGATAACCGCACTCAGGCAGC
CCTTGCTCGTCTTGAGGCATTGGAAAATGACAATGCGGGAGTGGAATTGATCGAAAACATCGACGACGAAGATGCCTCTCTCGACGATGATGATCAAGCATACATTCAGA
AGCGACAATCCAAGGGCACTAAGCGCAAAACTAGACAGGCAAAAGCACTTGAAGCTAAGAAGGCTCCTAAAACTTTCATGGAGCTTCTGCACGAGGCAAATTTGGAGTCT
TTGCCTCCACATGTTCCATCATACTTAAAGGCTGCCGTTGGACCTCCAAGCTCTACCTCCCGTCGGCATTTCTGCACGGTTTGTGGTTTTTCTGCTAGCTACACGTGCAT
AAGGTGTGGAATTCGATTTTGTTCATGTCGTTGCCAGAATATACATAATGATACTCGTTGTTTGAAGTTTGTTGCCTGA
Protein sequenceShow/hide protein sequence
MDDDATNAFRRMSSRTRKVAPKMVAALASSDNRTQAALARLEALENDNAGVELIENIDDEDASLDDDDQAYIQKRQSKGTKRKTRQAKALEAKKAPKTFMELLHEANLES
LPPHVPSYLKAAVGPPSSTSRRHFCTVCGFSASYTCIRCGIRFCSCRCQNIHNDTRCLKFVA