; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009868 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009868
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:42973893..42978365
RNA-Seq ExpressionLag0009868
SyntenyLag0009868
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU30026.1 hypothetical protein TSUD_161120 [Trifolium subterraneum]1.0e-1234.76Show/hide
Query:  VGTLDPESEASMDSWSLESSSLEGVFNLQE-------EHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQA
        +  L+    AS  + SLE S +    N+ E         IGV   +S  RYL L +   +SK  IF  V+DRVW+ ++GWKEK  S  GKE LIKAVAQA
Subjt:  VGTLDPESEASMDSWSLESSSLEGVFNLQE-------EHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQA

Query:  IPTYTMSYFKL-----RCPYAMMAKQCWRLSRDQSSHLYRVLRVGISVWVPSFRQHWGRTRNMCGGAYCGGENYLDEVLGGELVKVI
        IP Y MS +K+     R    M+AK  W     Q        +V    W     ++ G+ +N  G  + G E +   +LG +  ++I
Subjt:  IPTYTMSYFKL-----RCPYAMMAKQCWRLSRDQSSHLYRVLRVGISVWVPSFRQHWGRTRNMCGGAYCGGENYLDEVLGGELVKVI

XP_012842424.1 PREDICTED: uncharacterized protein LOC105962657 [Erythranthe guttata]3.0e-1243.08Show/hide
Query:  VVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLRCPY-----AMMAKQCWRLSRDQSSHLYRV
        VV      +YL L L   +SK  +F  +RDRVWK LQGWKEK  S GGKE+LIKAV QAIPTY +S FKL   +       MAK  W+ +R +       
Subjt:  VVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLRCPY-----AMMAKQCWRLSRDQSSHLYRV

Query:  LRVGISVWVPSFRQHWGRTRNMCGGAYCGG
           GI         HW +  +MC    CGG
Subjt:  LRVGISVWVPSFRQHWGRTRNMCGGAYCGG

XP_021721016.1 uncharacterized protein LOC110688556 [Chenopodium quinoa]3.5e-1344.55Show/hide
Query:  IGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLR-----------CPYAMMAKQCWRLSRD
        +GV +     +YL L +   +SK VIF L+++R+W+ LQGWKEKL S  GKEV+IKAVAQAIPTY MS FK+               A++AKQ WRL   
Subjt:  IGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLR-----------CPYAMMAKQCWRLSRD

Query:  QSSHLYRVLR
         ++  + +L+
Subjt:  QSSHLYRVLR

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]1.4e-1458.11Show/hide
Query:  EEHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFK
        E  + V +T+ +G+YL L  Q  ++KC +F  + +RVW+ LQGWKEKLFS GGKEVLIKAVAQAIP Y+MS F+
Subjt:  EEHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFK

XP_042974690.1 uncharacterized protein LOC122306323 [Carya illinoinensis]3.9e-1242.5Show/hide
Query:  GVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKL---RCPYA--MMAKQCWRLSRDQSSHLYR
        G+ Q     +YL L     +SK   F  ++ +VWK LQGWKE+L S GGKEVLIKAVA +IP+Y+MS FKL    C     MMAK  W   R+++   +R
Subjt:  GVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKL---RCPYA--MMAKQCWRLSRDQSSHLYR

Query:  V-----LRVGISVWVPSFRQ
        V     + +   VW+P   Q
Subjt:  V-----LRVGISVWVPSFRQ

TrEMBL top hitse value%identityAlignment
A0A2Z6MBL0 Uncharacterized protein5.0e-1334.76Show/hide
Query:  VGTLDPESEASMDSWSLESSSLEGVFNLQE-------EHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQA
        +  L+    AS  + SLE S +    N+ E         IGV   +S  RYL L +   +SK  IF  V+DRVW+ ++GWKEK  S  GKE LIKAVAQA
Subjt:  VGTLDPESEASMDSWSLESSSLEGVFNLQE-------EHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQA

Query:  IPTYTMSYFKL-----RCPYAMMAKQCWRLSRDQSSHLYRVLRVGISVWVPSFRQHWGRTRNMCGGAYCGGENYLDEVLGGELVKVI
        IP Y MS +K+     R    M+AK  W     Q        +V    W     ++ G+ +N  G  + G E +   +LG +  ++I
Subjt:  IPTYTMSYFKL-----RCPYAMMAKQCWRLSRDQSSHLYRVLRVGISVWVPSFRQHWGRTRNMCGGAYCGGENYLDEVLGGELVKVI

A0A6J1CV63 uncharacterized protein LOC1110146626.9e-1558.11Show/hide
Query:  EEHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFK
        E  + V +T+ +G+YL L  Q  ++KC +F  + +RVW+ LQGWKEKLFS GGKEVLIKAVAQAIP Y+MS F+
Subjt:  EEHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFK

A0A803NG99 Uncharacterized protein1.9e-1237.7Show/hide
Query:  RYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLRCPY-----AMMAKQCWRLSRDQSSHLYRVLRVGISVW
        +YL L   + Q+K  +F  ++DR+WK+L  W +KLFS+GGKEVL+KAV Q+IPTY MS FKL   +      MMA+  W  + D+               
Subjt:  RYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLRCPY-----AMMAKQCWRLSRDQSSHLYRVLRVGISVW

Query:  VPSFRQHWGRTRNMCGGAYCGG
            R HW + + +C     GG
Subjt:  VPSFRQHWGRTRNMCGGAYCGG

A0A803P4Z0 Uncharacterized protein1.4e-1248.81Show/hide
Query:  FRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKL-----------RCPYAMMAKQCWRLSRDQSSHLYRVLR
        F  + DR+WK+L  WKE+LFS+GGKEVL+KA+ Q+IPTY MSYF+L                ++AKQ WRL ++  S L +VLR
Subjt:  FRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKL-----------RCPYAMMAKQCWRLSRDQSSHLYRVLR

A0A803PQT0 Uncharacterized protein2.5e-1244.66Show/hide
Query:  RYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLRCP--------------YAMMAKQCWRLSRDQSSHLYR
        RYL L   +   K  +F  + D +WK+L  W+E+LFSVGGKEVL+KAV QAIPTY MS F+L                  A++AKQ WRL +  +S L R
Subjt:  RYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIKAVAQAIPTYTMSYFKLRCP--------------YAMMAKQCWRLSRDQSSHLYR

Query:  VLR
        +L+
Subjt:  VLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGACTGGAAGCCGCCAAAACCCTAGGGGGCTTATAAAAGAAGAGACCACCGGTGCATTCAGGGTTGGAACGCTTGATCCCGAGTCTGAAGCTTCAATGGATTCTTG
GAGCTTGGAGTCTTCTAGCCTTGAAGGAGTCTTCAATCTTCAAGAAGAGCACATTGGGGTGGTTCAGACGAGCTCACTTGGTCGATATTTGAGGCTCATTTTGCAGAATG
TTCAGTCAAAGTGTGTGATCTTTCGATTAGTTAGGGATCGGGTTTGGAAGGTCCTACAGGGGTGGAAGGAAAAGCTTTTTTCGGTAGGTGGGAAGGAGGTCCTCATAAAG
GCTGTTGCCCAGGCAATTCCCACCTATACGATGAGTTACTTTAAGCTTCGATGTCCCTATGCTATGATGGCTAAGCAGTGTTGGCGGTTGTCCCGAGATCAGTCTAGTCA
TTTGTATAGAGTTTTGCGGGTAGGTATTTCAGTATGGGTTCCTTCCTTCAGACAACATTGGGGTCGAACCCGTAATATGTGTGGCGGAGCCTATTGTGGGGGCGAGAACT
ATTTAGACGAGGTATTAGGTGGAGAGTTGGTAAAGGTCATAGTATTTGGATATGGGGGACCATTGGATCCCGAGGAACAGAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGACTGGAAGCCGCCAAAACCCTAGGGGGCTTATAAAAGAAGAGACCACCGGTGCATTCAGGGTTGGAACGCTTGATCCCGAGTCTGAAGCTTCAATGGATTCTTG
GAGCTTGGAGTCTTCTAGCCTTGAAGGAGTCTTCAATCTTCAAGAAGAGCACATTGGGGTGGTTCAGACGAGCTCACTTGGTCGATATTTGAGGCTCATTTTGCAGAATG
TTCAGTCAAAGTGTGTGATCTTTCGATTAGTTAGGGATCGGGTTTGGAAGGTCCTACAGGGGTGGAAGGAAAAGCTTTTTTCGGTAGGTGGGAAGGAGGTCCTCATAAAG
GCTGTTGCCCAGGCAATTCCCACCTATACGATGAGTTACTTTAAGCTTCGATGTCCCTATGCTATGATGGCTAAGCAGTGTTGGCGGTTGTCCCGAGATCAGTCTAGTCA
TTTGTATAGAGTTTTGCGGGTAGGTATTTCAGTATGGGTTCCTTCCTTCAGACAACATTGGGGTCGAACCCGTAATATGTGTGGCGGAGCCTATTGTGGGGGCGAGAACT
ATTTAGACGAGGTATTAGGTGGAGAGTTGGTAAAGGTCATAGTATTTGGATATGGGGGACCATTGGATCCCGAGGAACAGAAATGA
Protein sequenceShow/hide protein sequence
MLTGSRQNPRGLIKEETTGAFRVGTLDPESEASMDSWSLESSSLEGVFNLQEEHIGVVQTSSLGRYLRLILQNVQSKCVIFRLVRDRVWKVLQGWKEKLFSVGGKEVLIK
AVAQAIPTYTMSYFKLRCPYAMMAKQCWRLSRDQSSHLYRVLRVGISVWVPSFRQHWGRTRNMCGGAYCGGENYLDEVLGGELVKVIVFGYGGPLDPEEQK