; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009879 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009879
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionElf4 domain-containing protein
Genome locationchr9:43047392..43047769
RNA-Seq ExpressionLag0009879
SyntenyLag0009879
Gene Ontology termsGO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR009741 - Protein EARLY FLOWERING 4 domain
IPR040462 - Protein EARLY FLOWERING 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2673147.1 hypothetical protein I3760_13G076000 [Carya illinoinensis]6.0e-2967.92Show/hide
Query:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRP
        NK+ +S+E +M +D D   EECDMEVW +LS+SF QVQS LD NR+LIQQVNENHQSRI DNL KNV LIREINGNIS+V+SIYSDLS NFS  ++QRR 
Subjt:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRP

Query:  VMESKS
        +M S++
Subjt:  VMESKS

KAG6681120.1 hypothetical protein I3842_13G076000 [Carya illinoinensis]6.0e-2967.92Show/hide
Query:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRP
        NK+ +S+E +M +D D   EECDMEVW +LS+SF QVQS LD NR+LIQQVNENHQSRI DNL KNV LIREINGNIS+V+SIYSDLS NFS  ++QRR 
Subjt:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRP

Query:  VMESKS
        +M S++
Subjt:  VMESKS

KAG7035362.1 Protein EARLY FLOWERING 4, partial [Cucurbita argyrosperma subsp. argyrosperma]9.3e-3878.63Show/hide
Query:  MKNKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQR
        MKNK  KSDE D  DDGDLEAEECDMEVWN L KSF QVQSVL+HNR LIQQVNEN QSRISDNLV N+SLI EINGNISRVISIYSDLSA+F   IQQ+
Subjt:  MKNKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQR

Query:  RPVMESKSCEDDGGGGI
        R V ESKS E++GG GI
Subjt:  RPVMESKSCEDDGGGGI

KAG7949466.1 hypothetical protein I3843_13G064100 [Carya illinoinensis]6.0e-2967.92Show/hide
Query:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRP
        NK+ +S+E +M +D D   EECDMEVW +LS+SF QVQS LD NR+LIQQVNENHQSRI DNL KNV LIREINGNIS+V+SIYSDLS NFS  ++QRR 
Subjt:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRP

Query:  VMESKS
        +M S++
Subjt:  VMESKS

XP_023532325.1 protein EARLY FLOWERING 4-like [Cucurbita pepo subsp. pepo]5.3e-4182.76Show/hide
Query:  MKNKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQR
        MKNKRPKSDERD  DDGDLEAEECDMEVWN L KSF QVQSVL+HNR LIQQVNEN QSRISDNLV N+SLI EINGNISRVISIYSDLSA+F   IQQR
Subjt:  MKNKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQR

Query:  RPVMESKSCEDDGGGG
        R V ESKS E++GGGG
Subjt:  RPVMESKSCEDDGGGG

TrEMBL top hitse value%identityAlignment
A0A067LNP8 Elf4 domain-containing protein2.1e-2770.1Show/hide
Query:  DDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCE
        DD+ D+E EECD EVWN+L KSF QVQSVLD NR LI QVNENHQSRI DN+ KNV LIREIN NIS+VISIYSDLS NFS  +Q+RR +    S E
Subjt:  DDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCE

A0A068UNN5 Elf4 domain-containing protein6.7e-2665.71Show/hide
Query:  KSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMES
        K DE D D++ D E E CD++ W +LSKSF  VQSVLDHNR LI+QVNENHQS+++DNLVKNV+LI+EINGNIS+V+ IYSDLS NFS  +QQR+ +  S
Subjt:  KSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMES

Query:  KSCED
        KSC D
Subjt:  KSCED

A0A3N7EBY2 Elf4 domain-containing protein3.0e-2667.96Show/hide
Query:  PKSDERDMDDDG-----DLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQR
        PK +++ + D G       E EECD+E W++LSKSF QVQSVLDHNR LIQQVN NHQS+I DNLVKNVSLIREINGNIS+V+SIYSDLS NFS  +Q+R
Subjt:  PKSDERDMDDDG-----DLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQR

Query:  RPV
        R V
Subjt:  RPV

A0A6P6WAN5 protein ELF4-LIKE 1-like isoform X16.7e-2665.71Show/hide
Query:  KSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMES
        K DE D D++ D E E CD++ W +LSKSF  VQSVLDHNR LI+QVNENHQS+++DNLVKNV+LI+EINGNIS+V+ IYSDLS NFS  +QQR+ +  S
Subjt:  KSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMES

Query:  KSCED
        KSC D
Subjt:  KSCED

A0A7N2QXV4 Elf4 domain-containing protein3.9e-2672.53Show/hide
Query:  DDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVM
        D D D E EECD+EVW  LSKSF QVQSVLD NR LI QVNENHQS+I+DNL KNV+LIREIN NIS+V+SIYSDLS NFS  + QRR  M
Subjt:  DDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVM

SwissProt top hitse value%identityAlignment
O04211 Protein EARLY FLOWERING 41.3e-1851.96Show/hide
Query:  EAEEC-DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDGGGGID
        EAE+  D  +W +L ++F QVQSVLD NRSLIQQVN+NHQSR++DN+ KNV+LI+E+NGNIS+V+++YSDL+ +FS            K+  D GG    
Subjt:  EAEEC-DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDGGGGID

Query:  KA
        +A
Subjt:  KA

O80877 Protein ELF4-LIKE 11.5e-1955.56Show/hide
Query:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRR
        N+ P+ +E D +D     A E D+EVW++LS  F + Q  LD NR LIQ+VNENH SRI DN+ +NV LI EINGNIS+V+ IYSDLS NF+    QRR
Subjt:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRR

Q570U6 Protein ELF4-LIKE 42.8e-1343.82Show/hide
Query:  DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG
        D ++  S  KSF  VQ +LD NR LI ++N+NH+S+  DNL +NV LI+E+N NI RV S+Y DLS +F+ ++        S + + DG
Subjt:  DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG

Q8S8F5 Protein ELF4-LIKE 32.3e-1551.32Show/hide
Query:  ECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQ
        + D ++  +  KSF QVQ++LDHNR LI ++N+NH+S+I DNL +NV LIRE+N N+ RV  +Y DLS NFS +++
Subjt:  ECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQ

Q94BS8 Protein ELF4-LIKE 21.4e-1240.43Show/hide
Query:  EAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG
        E  + D ++  +  KSF QVQ +LD NR LI ++N+NH+S+ +D+L +NV LIRE+N NI  V S+Y DLS +F+ ++        + + + DG
Subjt:  EAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG

Arabidopsis top hitse value%identityAlignment
AT1G17455.1 ELF4-like 42.0e-1443.82Show/hide
Query:  DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG
        D ++  S  KSF  VQ +LD NR LI ++N+NH+S+  DNL +NV LI+E+N NI RV S+Y DLS +F+ ++        S + + DG
Subjt:  DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG

AT1G17455.2 ELF4-like 42.0e-1443.82Show/hide
Query:  DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG
        D ++  S  KSF  VQ +LD NR LI ++N+NH+S+  DNL +NV LI+E+N NI RV S+Y DLS +F+ ++        S + + DG
Subjt:  DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDG

AT2G06255.1 ELF4-like 31.6e-1651.32Show/hide
Query:  ECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQ
        + D ++  +  KSF QVQ++LDHNR LI ++N+NH+S+I DNL +NV LIRE+N N+ RV  +Y DLS NFS +++
Subjt:  ECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQ

AT2G29950.1 ELF4-like 11.1e-2055.56Show/hide
Query:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRR
        N+ P+ +E D +D     A E D+EVW++LS  F + Q  LD NR LIQ+VNENH SRI DN+ +NV LI EINGNIS+V+ IYSDLS NF+    QRR
Subjt:  NKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRR

AT2G40080.1 Protein of unknown function (DUF1313)9.3e-2051.96Show/hide
Query:  EAEEC-DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDGGGGID
        EAE+  D  +W +L ++F QVQSVLD NRSLIQQVN+NHQSR++DN+ KNV+LI+E+NGNIS+V+++YSDL+ +FS            K+  D GG    
Subjt:  EAEEC-DMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCEDDGGGGID

Query:  KA
        +A
Subjt:  KA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACAAACGGCCGAAGTCAGATGAGCGAGATATGGACGATGACGGTGATTTAGAGGCGGAGGAGTGCGATATGGAGGTCTGGAATTCGCTTAGCAAGAGCTTCTG
TCAGGTACAGTCCGTTTTGGATCATAATCGTTCGTTAATCCAGCAGGTGAACGAGAATCACCAGTCGAGGATCTCCGATAATCTGGTCAAAAACGTCTCGTTGATTCGTG
AGATTAATGGTAACATCTCTCGTGTAATCTCGATTTACTCCGATTTGTCTGCCAATTTCTCCTGTGCAATCCAACAGAGGCGTCCTGTTATGGAGTCGAAATCCTGCGAA
GACGATGGAGGTGGAGGAATTGACAAGGCAGGGAACGCAGATGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACAAACGGCCGAAGTCAGATGAGCGAGATATGGACGATGACGGTGATTTAGAGGCGGAGGAGTGCGATATGGAGGTCTGGAATTCGCTTAGCAAGAGCTTCTG
TCAGGTACAGTCCGTTTTGGATCATAATCGTTCGTTAATCCAGCAGGTGAACGAGAATCACCAGTCGAGGATCTCCGATAATCTGGTCAAAAACGTCTCGTTGATTCGTG
AGATTAATGGTAACATCTCTCGTGTAATCTCGATTTACTCCGATTTGTCTGCCAATTTCTCCTGTGCAATCCAACAGAGGCGTCCTGTTATGGAGTCGAAATCCTGCGAA
GACGATGGAGGTGGAGGAATTGACAAGGCAGGGAACGCAGATGGCTGA
Protein sequenceShow/hide protein sequence
MKNKRPKSDERDMDDDGDLEAEECDMEVWNSLSKSFCQVQSVLDHNRSLIQQVNENHQSRISDNLVKNVSLIREINGNISRVISIYSDLSANFSCAIQQRRPVMESKSCE
DDGGGGIDKAGNADG