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Lag0009894 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009894
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr9:43159390..43160980
RNA-Seq ExpressionLag0009894
SyntenyLag0009894
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056565.1 hypothetical protein E6C27_scaffold288G00700 [Cucumis melo var. makuwa]1.5e-0456.14Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF
        +KVR NY GFLPA +RI D E + F+IQVVT+ EG  LI+  V +HG F   AA AF
Subjt:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF

TYK03139.1 hypothetical protein E5676_scaffold11G00140 [Cucumis melo var. makuwa]6.6e-0550.75Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHR-GPNDPSF
        +KVR NY GFLPA +RI D E + F++QVVT+ EG  LI+  V +HG F   AA AF    PN   F
Subjt:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHR-GPNDPSF

TYK24247.1 hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa]1.5e-0456.14Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF
        +KVR NY GFLPA +RI D E + F+IQVVT+ EG  LI+  V +HG F   AA AF
Subjt:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]2.1e-0640.54Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCEDLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHRGPNDPSFCPADIWRMK
        +KV+ NYCGF+PA I  +D    F  +VV++++   L    VG+HG FS  AA +FH+G  + S    D WR++
Subjt:  MKVRDNYCGFLPAGIRIVDCEDLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHRGPNDPSFCPADIWRMK

XP_031741396.1 general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus]3.3e-0444.64Show/hide
Query:  DCEDLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHRGPNDPSFCPADIWRMK
        D +D  + +VV++Q+  +LID V G+HG FSP  A  F +GP  P   P DIWR++
Subjt:  DCEDLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHRGPNDPSFCPADIWRMK

TrEMBL top hitse value%identityAlignment
A0A5A7UST0 DUF4283 domain-containing protein7.1e-0556.14Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF
        +KVR NY GFLPA +RI D E + F+IQVVT+ EG  LI+  V +HG F   AA AF
Subjt:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF

A0A5D3BYI6 Uncharacterized protein3.2e-0550.75Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHR-GPNDPSF
        +KVR NY GFLPA +RI D E + F++QVVT+ EG  LI+  V +HG F   AA AF    PN   F
Subjt:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHR-GPNDPSF

A0A5D3DJE1 DUF4283 domain-containing protein2.1e-0454.39Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF
        +KVR NY GFLPA +RI D E + F+IQVVT+ EG  LI+  V +HG F   AA  F
Subjt:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF

A0A5D3DKV0 DUF4283 domain-containing protein7.1e-0556.14Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF
        +KVR NY GFLPA +RI D E + F+IQVVT+ EG  LI+  V +HG F   AA AF
Subjt:  MKVRDNYCGFLPAGIRIVDCE-DLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAF

A0A6J1D6X4 uncharacterized protein LOC1110181869.9e-0740.54Show/hide
Query:  MKVRDNYCGFLPAGIRIVDCEDLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHRGPNDPSFCPADIWRMK
        +KV+ NYCGF+PA I  +D    F  +VV++++   L    VG+HG FS  AA +FH+G  + S    D WR++
Subjt:  MKVRDNYCGFLPAGIRIVDCEDLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHRGPNDPSFCPADIWRMK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGTCAGAGACAACTACTGTGGTTTTCTACCGGCGGGAATAAGGATCGTAGATTGTGAAGATCTTTTTAATATCCAGGTCGTTACTTACCAAGAGGGTATCATGTT
AATTGACTGGGTCGTCGGAGTTCACGGGATCTTCTCGCCGGCGGCGGCCCATGCCTTTCACAGAGGTCCAAATGACCCTTCCTTTTGCCCAGCAGATATATGGAGAATGA
AAATGGCTGTGACTACCCAACGAGGCATCGAAAAACGGCAGCTTGTAAGTAACAAACCTCAATCTCCCCTTCATCCCCCTTCTGATAGTAGCATTGAGGATAGACCTGAA
AAGAAGAGACCGATGATCCAAATAGCGGATCAAAGGTTCAAGATTACGATAGCATCGAAGAAGCGATTTAAGAAACTCCAAGGGCATTGGCTATCATTCAGCCGACCAGG
GAAGAACAATAATATGAACAATGCTAAGGGTACAGGGCTTATTGAGGTCGGTGGTATTTTAATTATGTGGAGAGATTCCGTTGTTGATGTGATTGATTCAGTGTTGGGGG
CATATTCTATCTTTTCCAATGCTCTTTTCAGGGCGAGATTGAGGGATGGATCTCTAGTGTTTACGGGTCGTGTTCCTATAGAGAAAGAGATCTGTTTTTACAAGAGCTCT
ATGATCTTCAGGGGCTATGTCAGGGGGCGTGGTGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGTCAGAGACAACTACTGTGGTTTTCTACCGGCGGGAATAAGGATCGTAGATTGTGAAGATCTTTTTAATATCCAGGTCGTTACTTACCAAGAGGGTATCATGTT
AATTGACTGGGTCGTCGGAGTTCACGGGATCTTCTCGCCGGCGGCGGCCCATGCCTTTCACAGAGGTCCAAATGACCCTTCCTTTTGCCCAGCAGATATATGGAGAATGA
AAATGGCTGTGACTACCCAACGAGGCATCGAAAAACGGCAGCTTGTAAGTAACAAACCTCAATCTCCCCTTCATCCCCCTTCTGATAGTAGCATTGAGGATAGACCTGAA
AAGAAGAGACCGATGATCCAAATAGCGGATCAAAGGTTCAAGATTACGATAGCATCGAAGAAGCGATTTAAGAAACTCCAAGGGCATTGGCTATCATTCAGCCGACCAGG
GAAGAACAATAATATGAACAATGCTAAGGGTACAGGGCTTATTGAGGTCGGTGGTATTTTAATTATGTGGAGAGATTCCGTTGTTGATGTGATTGATTCAGTGTTGGGGG
CATATTCTATCTTTTCCAATGCTCTTTTCAGGGCGAGATTGAGGGATGGATCTCTAGTGTTTACGGGTCGTGTTCCTATAGAGAAAGAGATCTGTTTTTACAAGAGCTCT
ATGATCTTCAGGGGCTATGTCAGGGGGCGTGGTGCATAG
Protein sequenceShow/hide protein sequence
MKVRDNYCGFLPAGIRIVDCEDLFNIQVVTYQEGIMLIDWVVGVHGIFSPAAAHAFHRGPNDPSFCPADIWRMKMAVTTQRGIEKRQLVSNKPQSPLHPPSDSSIEDRPE
KKRPMIQIADQRFKITIASKKRFKKLQGHWLSFSRPGKNNNMNNAKGTGLIEVGGILIMWRDSVVDVIDSVLGAYSIFSNALFRARLRDGSLVFTGRVPIEKEICFYKSS
MIFRGYVRGRGA