; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0009895 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009895
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDUF4283 domain-containing protein
Genome locationchr9:43161070..43161585
RNA-Seq ExpressionLag0009895
SyntenyLag0009895
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039967.1 hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]1.1e-1736.67Show/hide
Query:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK
        +R  D+GR    +V  +   KS  +   SS   E++SR   NI +      + + +W+  +V+T+R FHDDW RI++ L++QL   +   PF+ D+AL+ 
Subjt:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK

Query:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR
          + + A LL  NKGW + G   +K E+W+ K H+    +PSYGGWIK+R
Subjt:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR

KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]3.8e-1840.98Show/hide
Query:  SSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEK
        SS   E+NSR   NI +        + DW+   V+T+R FHDDW RI++ L++QL   +   PF  D+AL+   + + A LL  NKGW + G   +K E+
Subjt:  SSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEK

Query:  WNIKQHSRISCMPSYGGWIKLR
        W+ K H+    +PSYGGWIK+R
Subjt:  WNIKQHSRISCMPSYGGWIKLR

TYK05762.1 cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]1.7e-1844.04Show/hide
Query:  ITEF-KGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMP
        ITE  KG  E+  +DW +++V+T+R FHDDW +I++ L  QL  P+   PF  D+AL+     + A+L+  NKGW + G   +K E+WN K H+    +P
Subjt:  ITEF-KGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMP

Query:  SYGGWIKLR
        SYGGWIK+R
Subjt:  SYGGWIKLR

TYK24535.1 hypothetical protein E5676_scaffold266G00770 [Cucumis melo var. makuwa]1.5e-1736.67Show/hide
Query:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK
        +R  D+GR    +V  +   KS  +   SS   E++SR   NI +      + + +W+  +V+T+R FHDDW RI++ L++QL   +   PF  D+AL+ 
Subjt:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK

Query:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR
          + + A LL  NKGW + G   +K E+W+ K H+    +PSYGGWIK+R
Subjt:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]4.1e-2855.34Show/hide
Query:  GCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWI
        G +EVR ++W+E +VIT+RDFHDDW RIL  + +Q +   +INPFQ D+AL+KCPS  LA LL  NKGWV+FGP  +K E WN   H R    PSYG W+
Subjt:  GCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWI

Query:  KLR
        K+R
Subjt:  KLR

TrEMBL top hitse value%identityAlignment
A0A5A7TEK8 DUF4283 domain-containing protein5.4e-1836.67Show/hide
Query:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK
        +R  D+GR    +V  +   KS  +   SS   E++SR   NI +      + + +W+  +V+T+R FHDDW RI++ L++QL   +   PF+ D+AL+ 
Subjt:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK

Query:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR
          + + A LL  NKGW + G   +K E+W+ K H+    +PSYGGWIK+R
Subjt:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR

A0A5A7TFK7 DUF4283 domain-containing protein1.9e-1840.98Show/hide
Query:  SSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEK
        SS   E+NSR   NI +        + DW+   V+T+R FHDDW RI++ L++QL   +   PF  D+AL+   + + A LL  NKGW + G   +K E+
Subjt:  SSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEK

Query:  WNIKQHSRISCMPSYGGWIKLR
        W+ K H+    +PSYGGWIK+R
Subjt:  WNIKQHSRISCMPSYGGWIKLR

A0A5D3C3G6 Cleavage and polyadenylation specificity factor subunit 18.3e-1944.04Show/hide
Query:  ITEF-KGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMP
        ITE  KG  E+  +DW +++V+T+R FHDDW +I++ L  QL  P+   PF  D+AL+     + A+L+  NKGW + G   +K E+WN K H+    +P
Subjt:  ITEF-KGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMP

Query:  SYGGWIKLR
        SYGGWIK+R
Subjt:  SYGGWIKLR

A0A5D3DLP0 DUF4283 domain-containing protein7.1e-1836.67Show/hide
Query:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK
        +R  D+GR    +V  +   KS  +   SS   E++SR   NI +      + + +W+  +V+T+R FHDDW RI++ L++QL   +   PF  D+AL+ 
Subjt:  HRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLK

Query:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR
          + + A LL  NKGW + G   +K E+W+ K H+    +PSYGGWIK+R
Subjt:  CPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLR

A0A6J1D6X4 uncharacterized protein LOC1110181862.0e-2855.34Show/hide
Query:  GCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWI
        G +EVR ++W+E +VIT+RDFHDDW RIL  + +Q +   +INPFQ D+AL+KCPS  LA LL  NKGWV+FGP  +K E WN   H R    PSYG W+
Subjt:  GCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQALLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWI

Query:  KLR
        K+R
Subjt:  KLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGACAGAATGAATCGACTAACCTGGATACAACTCATAGAAGGAGAGATAAGGGGAGATCCTTCGCCGATATTGTAAGGAGCAAGCCGCCTCCTAAGTCCTCTAA
CCTTGGAATGCCGAGTAGTCTCCAGGGGGAAAATAACTCCAGAGTTTGGAGAAATATCACAGAGTTTAAAGGATGCAAAGAAGTAAGGAATATCGATTGGCAAGAGGTTT
TGGTGATAACCAAAAGAGATTTTCACGATGACTGGGGGCGCATCTTAGACATTTTACATCAGCAACTGAAAGAACCCCTTGTTATTAACCCCTTCCAGCCCGATCAGGCC
CTTCTTAAATGCCCCTCAACCAAGTTGGCAGACCTGCTTTCAATGAACAAAGGATGGGTTAGCTTTGGACCAACCATCTTAAAAGCTGAAAAATGGAATATCAAGCAGCA
CTCTCGAATCTCGTGCATGCCTAGCTATGGGGGGTGGATTAAACTAAGAACCTTCCTCTGCATTTATGGCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGACAGAATGAATCGACTAACCTGGATACAACTCATAGAAGGAGAGATAAGGGGAGATCCTTCGCCGATATTGTAAGGAGCAAGCCGCCTCCTAAGTCCTCTAA
CCTTGGAATGCCGAGTAGTCTCCAGGGGGAAAATAACTCCAGAGTTTGGAGAAATATCACAGAGTTTAAAGGATGCAAAGAAGTAAGGAATATCGATTGGCAAGAGGTTT
TGGTGATAACCAAAAGAGATTTTCACGATGACTGGGGGCGCATCTTAGACATTTTACATCAGCAACTGAAAGAACCCCTTGTTATTAACCCCTTCCAGCCCGATCAGGCC
CTTCTTAAATGCCCCTCAACCAAGTTGGCAGACCTGCTTTCAATGAACAAAGGATGGGTTAGCTTTGGACCAACCATCTTAAAAGCTGAAAAATGGAATATCAAGCAGCA
CTCTCGAATCTCGTGCATGCCTAGCTATGGGGGGTGGATTAAACTAAGAACCTTCCTCTGCATTTATGGCGGCTAA
Protein sequenceShow/hide protein sequence
MERQNESTNLDTTHRRRDKGRSFADIVRSKPPPKSSNLGMPSSLQGENNSRVWRNITEFKGCKEVRNIDWQEVLVITKRDFHDDWGRILDILHQQLKEPLVINPFQPDQA
LLKCPSTKLADLLSMNKGWVSFGPTILKAEKWNIKQHSRISCMPSYGGWIKLRTFLCIYGG