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Lag0009911 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009911
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr9:43283132..43284372
RNA-Seq ExpressionLag0009911
SyntenyLag0009911
Gene Ontology termsGO:0006313 - transposition, DNA-mediated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0004803 - transposase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037393.1 uncharacterized protein E6C27_scaffold278G001000 [Cucumis melo var. makuwa]1.6e-3438.22Show/hide
Query:  SGFKSDIVSAVVDVQGVDTNIHNGGGAVASSSRREKNFE---FANSDGIDALTDVVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACI
        S F  + +  VVD     TNI N     +   R E +       + D  ++    +S+  G +F     +KK +  LAL  SF+  T+ SN   + + C 
Subjt:  SGFKSDIVSAVVDVQGVDTNIHNGGGAVASSSRREKNFE---FANSDGIDALTDVVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACI

Query:  DDSCQW-----------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
        D SC W                 +N+SYDKAWRGRE ALN +RG+ E SYA +  F  +LI  N GTYTA+EVD   RFKF+F+++AAS + W +C+PVI
Subjt:  DDSCQW-----------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFDGSA
         VDG ++KNK+ G  ++ACT D ++
Subjt:  SVDGTSLKNKFSGTFLTACTFDGSA

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]9.9e-3236.49Show/hide
Query:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------
        V+ V  G +FS K  +KK +  LAL  SF+  T++SN   + + C D SC W                                                
Subjt:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------

Query:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
                               +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+ VI
Subjt:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFD
        SVDG ++KNK+ GT ++ACT D
Subjt:  SVDGTSLKNKFSGTFLTACTFD

TYK10904.1 uncharacterized protein E5676_scaffold231G00820 [Cucumis melo var. makuwa]3.6e-3442.86Show/hide
Query:  VSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW----------------------INISYDKAWRGREKALNELRGSPEVSY
        + +  G +F  K  +KK +  LAL  SF+  T++SN   + + C D SC W                      +N+SYDKAWRGRE ALN +RG  E SY
Subjt:  VSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW----------------------INISYDKAWRGREKALNELRGSPEVSY

Query:  AQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        A    F+  LI  N GTYT +E     RFKF+FM++AASI+ W +C+PVISVDG ++K K+ GT ++ACT DG++
Subjt:  AQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]2.4e-3336Show/hide
Query:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------
        V+ +  G +F  K  +KK +  LAL  SF+  T++SN   + + C D SC W                                                
Subjt:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------

Query:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
                               +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVI
Subjt:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFDGSA
        SVDG ++KNK+ GT ++ACT DG++
Subjt:  SVDGTSLKNKFSGTFLTACTFDGSA

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]4.4e-3235.11Show/hide
Query:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------
        V+ +  G +F  K  +KK +  LAL  SF+  T++SN   + + C D SC W                                                
Subjt:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------

Query:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
                               +NISYDKAW GRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVI
Subjt:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFDGSA
        SVDG ++KNK+ GT ++ CT DG++
Subjt:  SVDGTSLKNKFSGTFLTACTFDGSA

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958992.1e-3235.11Show/hide
Query:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------
        V+ +  G +F  K  +KK +  LAL  SF+  T++SN   + + C D SC W                                                
Subjt:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------

Query:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
                               +NISYDKAW GRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVI
Subjt:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFDGSA
        SVDG ++KNK+ GT ++ CT DG++
Subjt:  SVDGTSLKNKFSGTFLTACTFDGSA

A0A5A7V1Z6 CCHC-type domain-containing protein4.8e-3236.49Show/hide
Query:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------
        V+ V  G +FS K  +KK +  LAL  SF+  T++SN   + + C D SC W                                                
Subjt:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------

Query:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
                               +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+ VI
Subjt:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFD
        SVDG ++KNK+ GT ++ACT D
Subjt:  SVDGTSLKNKFSGTFLTACTFD

A0A5D3BH73 DBD_Tnp_Mut domain-containing protein7.9e-3538.22Show/hide
Query:  SGFKSDIVSAVVDVQGVDTNIHNGGGAVASSSRREKNFE---FANSDGIDALTDVVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACI
        S F  + +  VVD     TNI N     +   R E +       + D  ++    +S+  G +F     +KK +  LAL  SF+  T+ SN   + + C 
Subjt:  SGFKSDIVSAVVDVQGVDTNIHNGGGAVASSSRREKNFE---FANSDGIDALTDVVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACI

Query:  DDSCQW-----------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
        D SC W                 +N+SYDKAWRGRE ALN +RG+ E SYA +  F  +LI  N GTYTA+EVD   RFKF+F+++AAS + W +C+PVI
Subjt:  DDSCQW-----------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFDGSA
         VDG ++KNK+ G  ++ACT D ++
Subjt:  SVDGTSLKNKFSGTFLTACTFDGSA

A0A5D3CIA4 Uncharacterized protein1.8e-3442.86Show/hide
Query:  VSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW----------------------INISYDKAWRGREKALNELRGSPEVSY
        + +  G +F  K  +KK +  LAL  SF+  T++SN   + + C D SC W                      +N+SYDKAWRGRE ALN +RG  E SY
Subjt:  VSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW----------------------INISYDKAWRGREKALNELRGSPEVSY

Query:  AQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA
        A    F+  LI  N GTYT +E     RFKF+FM++AASI+ W +C+PVISVDG ++K K+ GT ++ACT DG++
Subjt:  AQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTACTFDGSA

A0A5D3E198 MuDRA-like transposase1.1e-3336Show/hide
Query:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------
        V+ +  G +F  K  +KK +  LAL  SF+  T++SN   + + C D SC W                                                
Subjt:  VVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSKQYTVACIDDSCQW------------------------------------------------

Query:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI
                               +NISYDKAWRGRE ALN +RG+PE SYA +  F+  LI  N GTYTA+E D   RFKF+FM++AASI+ W +C+PVI
Subjt:  -----------------------INISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVI

Query:  SVDGTSLKNKFSGTFLTACTFDGSA
        SVDG ++KNK+ GT ++ACT DG++
Subjt:  SVDGTSLKNKFSGTFLTACTFDGSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGACATCAAATTATGATTTTGTTCGGGGGTGTTTGGGATGTGGTGGGAGTCTACAGTGGGTTCAAGTCCGACATTGTATCTGCAGTTGTCGACGTGCAGGGGGT
AGATACTAATATACACAACGGGGGAGGGGCAGTTGCAAGTTCATCCCGGAGGGAGAAAAATTTTGAGTTTGCCAACTCAGATGGGATTGATGCATTGACCGACGTAGTAT
CCGTAACGGAGGGGTGCGTATTTTCATGCAAAGAACATATCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAATACAATTAAATCCAATAGCAAA
CAGTATACAGTGGCATGCATAGACGACTCATGCCAATGGATCAATATCAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGA
AGTGTCTTATGCGCAAATTCCGTTGTTTGCTGCCAGGTTGATCGAAAGGAATTCAGGTACGTACACCGCCCAGGAAGTTGATTCAAATGACAGGTTCAAGTTCTTCTTCA
TGAGTATTGCAGCTTCCATAAACGGGTGGAAACACTGTCTCCCAGTTATTTCGGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCTTTTTGACGGCCTGCACA
TTTGATGGGTCGGCAGGAGGAGGTCTGCACGAAGGCGATGGCAGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCAGGCTGTACGAAGAAGGACTGGCGTTTGTGGGAAG
ATGGAGGGTTTTGCTTGTCTTGAAGAGGGTCGTTTGTGGGAGATTGAGGGTTTTGCTGATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGACATCAAATTATGATTTTGTTCGGGGGTGTTTGGGATGTGGTGGGAGTCTACAGTGGGTTCAAGTCCGACATTGTATCTGCAGTTGTCGACGTGCAGGGGGT
AGATACTAATATACACAACGGGGGAGGGGCAGTTGCAAGTTCATCCCGGAGGGAGAAAAATTTTGAGTTTGCCAACTCAGATGGGATTGATGCATTGACCGACGTAGTAT
CCGTAACGGAGGGGTGCGTATTTTCATGCAAAGAACATATCAAGAAGGTAGTCTCTTCACTGGCTCTGAAAGGGAGTTTCCAATTCAATACAATTAAATCCAATAGCAAA
CAGTATACAGTGGCATGCATAGACGACTCATGCCAATGGATCAATATCAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGGCGTTAAATGAGTTGAGAGGATCTCCTGA
AGTGTCTTATGCGCAAATTCCGTTGTTTGCTGCCAGGTTGATCGAAAGGAATTCAGGTACGTACACCGCCCAGGAAGTTGATTCAAATGACAGGTTCAAGTTCTTCTTCA
TGAGTATTGCAGCTTCCATAAACGGGTGGAAACACTGTCTCCCAGTTATTTCGGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCTTTTTGACGGCCTGCACA
TTTGATGGGTCGGCAGGAGGAGGTCTGCACGAAGGCGATGGCAGGAGGTTGGATCGGCGGGAGGTGGGGGTCGGCAGGCTGTACGAAGAAGGACTGGCGTTTGTGGGAAG
ATGGAGGGTTTTGCTTGTCTTGAAGAGGGTCGTTTGTGGGAGATTGAGGGTTTTGCTGATTTGA
Protein sequenceShow/hide protein sequence
MAGHQIMILFGGVWDVVGVYSGFKSDIVSAVVDVQGVDTNIHNGGGAVASSSRREKNFEFANSDGIDALTDVVSVTEGCVFSCKEHIKKVVSSLALKGSFQFNTIKSNSK
QYTVACIDDSCQWINISYDKAWRGREKALNELRGSPEVSYAQIPLFAARLIERNSGTYTAQEVDSNDRFKFFFMSIAASINGWKHCLPVISVDGTSLKNKFSGTFLTACT
FDGSAGGGLHEGDGRRLDRREVGVGRLYEEGLAFVGRWRVLLVLKRVVCGRLRVLLI