CuGenDBv2

Gene ID	Lag0009979
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	histone H4
Genome location	chr9:43710810..43712697
RNA-Seq Expression	Lag0009979
Synteny	Lag0009979
Gene Ontology terms	GO:0000786 - nucleosome (cellular component) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domains	IPR001951 - Histone H4 IPR009072 - Histone-fold IPR019809 - Histone H4, conserved site IPR035425 - CENP-T/Histone H4, histone fold

Homology

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GenBank top hits

e value

%identity

Alignment

KAF4359294.1 hypothetical protein G4B88_024258 [Cannabis sativa]

2.5e-48

73.83

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGSISDECKSKFADSLSMRISEAVHFTRRKI
        FGV  +++      + + R S +        +SL M  ++    +  KI
Subjt:  FGVEVIDLESDPVIQANFRGSISDECKSKFADSLSMRISEAVHFTRRKI

KAG2371361.1 Histone H4 variant [Vigna angularis]

8.5e-49

93.91

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQ
        FGVE I + S   IQ
Subjt:  FGVEVIDLESDPVIQ

PHT46786.1 Histone H4 [Capsicum baccatum]

2.2e-49

59.7

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGSIS------DEC----------KSKFADSLSMRISEAVHFTRRKIFCSEIVAFLRNFLISGLGGIEWDVHDLNGSLICFE
        FG + I L  +  + A+ R  I+      + C          K +   +   + + A+HFT     C +             GG+ W  +D +G+ +CF 
Subjt:  FGVEVIDLESDPVIQANFRGSIS------DEC----------KSKFADSLSMRISEAVHFTRRKIFCSEIVAFLRNFLISGLGGIEWDVHDLNGSLICFE

Query:  I
        +
Subjt:  I

RZC88699.1 hypothetical protein C5167_031073 [Papaver somniferum]

1.1e-48

88.89

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQAN
        FGVE + +  + +++ +
Subjt:  FGVEVIDLESDPVIQAN

RZC90907.1 hypothetical protein C5167_028739 [Papaver somniferum]

2.5e-48

87.6

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGS
        FG   + L +      N R S
Subjt:  FGVEVIDLESDPVIQANFRGS

TrEMBL top hits

e value

%identity

Alignment

A0A2G2WNG6 Histone H4

1.1e-49

59.7

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGSIS------DEC----------KSKFADSLSMRISEAVHFTRRKIFCSEIVAFLRNFLISGLGGIEWDVHDLNGSLICFE
        FG + I L  +  + A+ R  I+      + C          K +   +   + + A+HFT     C +             GG+ W  +D +G+ +CF 
Subjt:  FGVEVIDLESDPVIQANFRGSIS------DEC----------KSKFADSLSMRISEAVHFTRRKIFCSEIVAFLRNFLISGLGGIEWDVHDLNGSLICFE

Query:  I
        +
Subjt:  I

A0A4Y7KYD5 Histone H4

1.6e-48

87.2

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGSISDE
        FG   + L S      N  GS S+E
Subjt:  FGVEVIDLESDPVIQANFRGSISDE

A0A4Y7KZ51 Multifunctional fusion protein

1.2e-48

87.6

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGS
        FG   + L +      N R S
Subjt:  FGVEVIDLESDPVIQANFRGS

A0A7J6ELM7 Histone H4

1.2e-48

73.83

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGSISDECKSKFADSLSMRISEAVHFTRRKI
        FGV  +++      + + R S +        +SL M  ++    +  KI
Subjt:  FGVEVIDLESDPVIQANFRGSISDECKSKFADSLSMRISEAVHFTRRKI

A0A7J6H3M1 Histone H4

1.2e-48

73.83

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGVEVIDLESDPVIQANFRGSISDECKSKFADSLSMRISEAVHFTRRKI
        FGV  +++      + + R S +        +SL M  ++    +  KI
Subjt:  FGVEVIDLESDPVIQANFRGSISDECKSKFADSLSMRISEAVHFTRRKI

SwissProt top hits

e value

%identity

Alignment

P59259 Histone H4

1.8e-49

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

P62785 Histone H4 variant TH011

1.8e-49

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6LAF3 Histone H4

1.8e-49

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6PMI5 Histone H4

1.8e-49

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Q6WZ83 Histone H4

1.8e-49

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Arabidopsis top hits

e value

%identity

Alignment

AT1G07660.1 Histone superfamily protein

1.3e-50

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT1G07820.1 Histone superfamily protein

1.3e-50

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT1G07820.2 Histone superfamily protein

1.3e-50

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT2G28740.1 histone H4

1.3e-50

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

AT3G45930.1 Histone superfamily protein

1.3e-50

100

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Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FG
        FG
Subjt:  FG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTCTGGGCGTGGAAAGGGAGGCAAGGGCTTGGGAAAGGGCGGAGCAAAGCGTCACAGGAAGGTTTTGAGAGATAATATCCAGGGCATTACCAAGCCTGCAATCCGCCG
TTTGGCGCGTAGAGGCGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGCGTTTTGAAGATCTTCCTTGAGAATGTCATTCGCGATGCTGTTACCTACA
CTGAGCATGCTAGGAGGAAGACGGTGACTGCCATGGATGTTGTTTATGCACTGAAGAGGCAGGGGAGAACTCTGTACGGGTTCGGAGTTGAAGTAATTGATCTAGAATCT
GATCCAGTTATCCAGGCTAATTTCCGAGGTTCTATTTCAGATGAATGTAAATCTAAGTTTGCAGATTCGTTATCCATGCGAATTTCCGAGGCTGTTCACTTCACTAGAAG
AAAGATCTTCTGTTCGGAGATTGTGGCTTTTCTCAGAAATTTCTTGATCTCAGGCCTCGGTGGGATAGAATGGGATGTGCATGACTTGAATGGATCCCTAATTTGTTTTG
AAATCCAAAAAATCACGAGTAATTGGGGGATCAAGGTATTGGAGGCTAAAGCTATTCTTGAAGGAATCAAAGCAATTAGCCATACCTATATTCAAAAGATCCCAATGGAA
TTCGAGTGGGATGCCTTGGAGGTGATCAGATCGTTGAGAGGAGAAGATCTTTCTGAGCTGAATCTGGTTGATGAAATTCTCCGCATATCTTTGAGGCTGGAGTCGGCAAC
TTTGGCCGATTTTTGTAATTGCAGTTGA

mRNA sequence

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Protein sequence

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MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGVEVIDLES
DPVIQANFRGSISDECKSKFADSLSMRISEAVHFTRRKIFCSEIVAFLRNFLISGLGGIEWDVHDLNGSLICFEIQKITSNWGIKVLEAKAILEGIKAISHTYIQKIPME
FEWDALEVIRSLRGEDLSELNLVDEILRISLRLESATLADFCNCS

Lag0009979 (gene) of Sponge gourd (AG-4) v1 genome