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Lag0009985 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0009985
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr9:43723880..43728691
RNA-Seq ExpressionLag0009985
SyntenyLag0009985
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023876176.1 uncharacterized protein LOC111988620 [Quercus suber]9.8e-1935.5Show/hide
Query:  RTKSEAREKSEADQRP-----RSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALV
        R + E R++ +  +RP     R+ R  +    RF  +TPLTA  +QVL  I+D   L  P K +SDP +R ++KYC FH DHGH T EC  L+ +IEAL+
Subjt:  RTKSEAREKSEADQRP-----RSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALV

Query:  RKGYPKGFVGNDKSKRP----LPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI
        R+G  + FV  ++  +P     P    +    P+ +I+ I+GG+S  G +     K +R+ Y   ++N+
Subjt:  RKGYPKGFVGNDKSKRP----LPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI

XP_030936353.1 uncharacterized protein LOC115961515 [Quercus lobata]7.5e-1934.39Show/hide
Query:  RRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATR
        +R   QK  +  + E   R K     K + D +           AR   YTPL A  +QVL  I+D   LK PEK + DP++R KNKYC FH DHGH T 
Subjt:  RRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATR

Query:  ECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRKAQATSALG
        EC  L+ +I+ L+R+G  + FVG D     L     +    PL EI+ I+GG+S       G+   S++ Y   ++N+    ++    G
Subjt:  ECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRKAQATSALG

XP_030950020.1 uncharacterized protein LOC115973918 [Quercus lobata]8.8e-2036.21Show/hide
Query:  ENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVR
        E   R K    ++    +  +    VRNQ     +YTPL A  EQVL  I+D   LK PEK + DP++R +NKYC FH DHGH T EC  L+ +IE L+R
Subjt:  ENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVR

Query:  KGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRKAQATSAL
        +G  +GF+G D+               PL EI+ I+GGSS       G    S++ Y   ++N+    ++  A+
Subjt:  KGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRKAQATSAL

XP_030970463.1 uncharacterized protein LOC115990823 [Quercus lobata]9.8e-1934.15Show/hide
Query:  SANDRGRAEAQSQKKKARRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRR
        SA +   AE     KK +RS         + E   R K    ++    +  +    VRNQ     +YTPL A  EQVL  I+D   LK PEK + DP++R
Subjt:  SANDRGRAEAQSQKKKARRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRR

Query:  IKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRKAQ
         +NKYC FH DHGH T EC  L+ +IE L+R+G  +GF+G D+               PL EI+ I+GGS        G    S++ Y   ++N+    +
Subjt:  IKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRKAQ

Query:  ATSAL
        +  A+
Subjt:  ATSAL

XP_030970531.1 uncharacterized protein LOC115990904 [Quercus lobata]1.5e-1934.95Show/hide
Query:  HSSANDRGRAEAQSQKKKARRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPD
        HS+ N     +A   KK+ +RS    T    + E   R K    E+    +  +   +VRNQ     +YTPL A  EQVL  I+D   LK P+K + DP+
Subjt:  HSSANDRGRAEAQSQKKKARRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPD

Query:  RRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRK
        +R +NKYC FH DHGH T EC  L+ +IE L+R+G  +GF+G D+          +    PL EI+ I+GGSS       G+   S++ Y   +++I   
Subjt:  RRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRK

Query:  AQATSA
         ++  A
Subjt:  AQATSA

TrEMBL top hitse value%identityAlignment
A0A2N9FWC9 Ribonuclease H2.0e-1739.13Show/hide
Query:  RFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPL--PADQGKGGAN--
        +F  +TPL    +++L  IQD   L+ P K RSDP+ R KN YC FH DHGH T EC+ L+++IE L+R+G  + +V    + RP   P  + +   N  
Subjt:  RFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPL--PADQGKGGAN--

Query:  -PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI
         P+ EI+TI+GG      A+ G  + SR+ Y   + NI
Subjt:  -PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI

A0A2N9FYE4 Uncharacterized protein2.6e-1739.13Show/hide
Query:  RFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPL--PADQGKGGAN--
        +F  +TPL    +++L  IQD   L+ P K RSDP+ R KN YC FH DHGH T EC+ L+++IE L+R+G  + +V    + RP   P  + +   N  
Subjt:  RFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRPL--PADQGKGGAN--

Query:  -PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI
         P+ EI+TI+GG      A+ G  + SR+ Y   + NI
Subjt:  -PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI

A0A2N9HH57 Ribonuclease H8.9e-1836.71Show/hide
Query:  EKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGND
        +K     +PR+ +       +F  +TPL    +++L  IQD   L+ P K RSDP+ R KN YC FH DHGH T EC+ L+++IE L+R+G  + +V   
Subjt:  EKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGND

Query:  KSKRPL--PADQGKGGAN---PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI
         + RP   PA + +   N   P+ EI+TI+GG      A+ G  + SR+ Y   + NI
Subjt:  KSKRPL--PADQGKGGAN---PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI

A0A6J1DWY0 uncharacterized protein LOC1110252931.4e-1836.77Show/hide
Query:  RRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATR
        +R+ P++  SG   +    ++ E R++S     PR          +F++YTP T   EQVL  I+D  LLK PE+ ++   +R K +YC+FH DHGHAT+
Subjt:  RRSSPQKTASGTYTENNVRTKSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATR

Query:  ECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSE
        +C  L++E+E L+R+GY K +V     + P     G+   +P  EI+TI+GG  E
Subjt:  ECIQLRDEIEALVRKGYPKGFVGNDKSKRPLPADQGKGGANPLFEIQTILGGSSE

A0A7N2N013 Ribonuclease H2.6e-1736.2Show/hide
Query:  KSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKG
        + + R+K     R R  R  +    RF  +TPL A  +QVL  I+D   L  P K +SDP +R ++KYC FH DHGH T +C  L+ +IEAL+R+G  + 
Subjt:  KSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKG

Query:  FVGNDKSKRPLPADQGKGGAN-----PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI
        FV   ++ +P P +Q     N     P+ +I+ I+GG+     AA G  K +R+ Y   ++N+
Subjt:  FVGNDKSKRPLPADQGKGGAN-----PLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTTAATACTGTACGTGGGATCGCATTTGAGTTTGGTGGTAAATCGACGGCGGAGAGAGGTTGTGAGAAGAGCCGTCTTTATGTGAAATCCAGATTCCACATTTC
AACCCTACAACATGAGGTTATGATCACTGAACGTGAGATCATGGAGTCATTGCATGAAATGTTTGGACAGTCGTCCACTCAGATCCGACACGAGGTCCTCAAATACATTT
TACAACGTTTGCATGAAGGAGGAAACAATCAGTACATGAGGAAATACATTCTCGATCTGATGGTCCACTTCAACATGCCCAATATAAACGAGACGGTAATTAACGAGCAG
AGTCGGGGTTCAGATCTTAGTTACCTCTCGCCTGGGTCATCCCTCCGACCTTATAGCTCTCCCCTTGCTAGGGTTTTTTCCTCCCGGCGTCGTGCACCGCACGTGACTCC
CCGCTCCCGGGCCCAGGAGGACCAATCCAGGTGGCCTAGGCAGCTGACGGATTTCAACTGGGCCCACCTTTGGTGGGCTTCTTCTTCCTTGGACCAATTTCAACTGGGCC
TGAAGTCCTTCCGCTCTGAACAAGAGAGAAATGGATGGTGTTTAGGCTCGTGGACTTCTAACATCTGCAGTTACAAGGGAAGACTCGACACTGACCAGGAAAGGGACCCA
GAGGGAGACCATACCGACGGGCCGGGCCAACGTGGCCCGTCCCGTACGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTT
GCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGTGGTCTGGCCTAC
ACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGAAGGGCAGGTGGATTGCTTGGCCAAA
TTTTGGCATCAACAGTTGGCGCCGTCTGTGGGGAAGAATGCTTGCCAGTTCGGATCGCACATCGGTGGTGGTCTGCACGATGGATCGGGTTCAGAAACCAGAGGGAAGCC
TCGGAAGGAGAGAGAGAACCGGGAAGCTGCTATATCCGACCAGCATCAAGAAGACAAAGGAAAAGGATGTCGGGTAGAAGATGTAGACCAGATCCGACATGAGCACTCCT
CGGCCAATGACCGAGGCCGAGCAGAAGCCCAATCGCAAAAAAAAAAAGCCCGCAGAAGTTCGCCGCAAAAGACAGCGTCGGGTACGTACACAGAAAATAATGTCAGGACA
AAGTCAGAGGCTCGGGAAAAGTCCGAGGCCGACCAGAGGCCAAGGAGCCACAGGGCTGTGCGGAACCAAAAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCGTT
TGAACAGGTCTTGGCCACAATACAAGACACAAATCTGTTGAAACGCCCAGAAAAGTTTAGATCAGACCCCGATAGGAGGATCAAAAACAAATACTGCATGTTCCACGGAG
ACCACGGTCATGCAACTCGAGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAGTCCGAAAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAAAAGCAAGAGGCCA
CTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTC
GAGGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCCCCTTC
CAATGAAACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTTAATACTGTACGTGGGATCGCATTTGAGTTTGGTGGTAAATCGACGGCGGAGAGAGGTTGTGAGAAGAGCCGTCTTTATGTGAAATCCAGATTCCACATTTC
AACCCTACAACATGAGGTTATGATCACTGAACGTGAGATCATGGAGTCATTGCATGAAATGTTTGGACAGTCGTCCACTCAGATCCGACACGAGGTCCTCAAATACATTT
TACAACGTTTGCATGAAGGAGGAAACAATCAGTACATGAGGAAATACATTCTCGATCTGATGGTCCACTTCAACATGCCCAATATAAACGAGACGGTAATTAACGAGCAG
AGTCGGGGTTCAGATCTTAGTTACCTCTCGCCTGGGTCATCCCTCCGACCTTATAGCTCTCCCCTTGCTAGGGTTTTTTCCTCCCGGCGTCGTGCACCGCACGTGACTCC
CCGCTCCCGGGCCCAGGAGGACCAATCCAGGTGGCCTAGGCAGCTGACGGATTTCAACTGGGCCCACCTTTGGTGGGCTTCTTCTTCCTTGGACCAATTTCAACTGGGCC
TGAAGTCCTTCCGCTCTGAACAAGAGAGAAATGGATGGTGTTTAGGCTCGTGGACTTCTAACATCTGCAGTTACAAGGGAAGACTCGACACTGACCAGGAAAGGGACCCA
GAGGGAGACCATACCGACGGGCCGGGCCAACGTGGCCCGTCCCGTACGGTCGGCCTCGGCCTTGGGCCGAGGCCGACCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTT
GCCTCCGCTCGGCCCCTACCGCTTCCAGCTGCCTCGGTCCAGCCTGCTTCGTCCCAGAACGCCTCCAAACCCTAGGAGTCCGAGCAGGCATCGGAGGTGGTCTGGCCTAC
ACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCCAGCTTCTACAAATTCATTGTTGGTGTCACGTGAAGGGCAGGTGGATTGCTTGGCCAAA
TTTTGGCATCAACAGTTGGCGCCGTCTGTGGGGAAGAATGCTTGCCAGTTCGGATCGCACATCGGTGGTGGTCTGCACGATGGATCGGGTTCAGAAACCAGAGGGAAGCC
TCGGAAGGAGAGAGAGAACCGGGAAGCTGCTATATCCGACCAGCATCAAGAAGACAAAGGAAAAGGATGTCGGGTAGAAGATGTAGACCAGATCCGACATGAGCACTCCT
CGGCCAATGACCGAGGCCGAGCAGAAGCCCAATCGCAAAAAAAAAAAGCCCGCAGAAGTTCGCCGCAAAAGACAGCGTCGGGTACGTACACAGAAAATAATGTCAGGACA
AAGTCAGAGGCTCGGGAAAAGTCCGAGGCCGACCAGAGGCCAAGGAGCCACAGGGCTGTGCGGAACCAAAAAGCCAGATTCGACAGGTATACACCACTAACAGCTTCGTT
TGAACAGGTCTTGGCCACAATACAAGACACAAATCTGTTGAAACGCCCAGAAAAGTTTAGATCAGACCCCGATAGGAGGATCAAAAACAAATACTGCATGTTCCACGGAG
ACCACGGTCATGCAACTCGAGAATGCATACAGTTGAGGGACGAGATAGAAGCCCTAGTCCGAAAAGGTTACCCCAAGGGGTTCGTGGGGAACGACAAAAGCAAGAGGCCA
CTGCCGGCAGATCAAGGTAAGGGCGGTGCCAACCCGCTATTCGAGATACAAACAATTTTAGGAGGATCATCCGAAGAAGGTGGAGCAGCGCATGGCGAGCAAAAAATGTC
GAGGGAATGTTACTTTATGGCGCTCAGGAACATCGACAGGAAGGCTCAAGCAACGTCGGCCTTGGGAGATGGCCGAGGCCGAGCCTTTGAGGGGTCAAGCTATCCCCTTC
CAATGAAACGTTGA
Protein sequenceShow/hide protein sequence
MWLNTVRGIAFEFGGKSTAERGCEKSRLYVKSRFHISTLQHEVMITEREIMESLHEMFGQSSTQIRHEVLKYILQRLHEGGNNQYMRKYILDLMVHFNMPNINETVINEQ
SRGSDLSYLSPGSSLRPYSSPLARVFSSRRRAPHVTPRSRAQEDQSRWPRQLTDFNWAHLWWASSSLDQFQLGLKSFRSEQERNGWCLGSWTSNICSYKGRLDTDQERDP
EGDHTDGPGQRGPSRTVGLGLGPRPTTRPVCAGRVRLPPLGPYRFQLPRSSLLRPRTPPNPRSPSRHRRWSGLHHTGVQRFLLVLQVTSSPASTNSLLVSREGQVDCLAK
FWHQQLAPSVGKNACQFGSHIGGGLHDGSGSETRGKPRKERENREAAISDQHQEDKGKGCRVEDVDQIRHEHSSANDRGRAEAQSQKKKARRSSPQKTASGTYTENNVRT
KSEAREKSEADQRPRSHRAVRNQKARFDRYTPLTASFEQVLATIQDTNLLKRPEKFRSDPDRRIKNKYCMFHGDHGHATRECIQLRDEIEALVRKGYPKGFVGNDKSKRP
LPADQGKGGANPLFEIQTILGGSSEEGGAAHGEQKMSRECYFMALRNIDRKAQATSALGDGRGRAFEGSSYPLPMKR