; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010037 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010037
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptiontRNA-intron lyase
Genome locationchr9:44162802..44168549
RNA-Seq ExpressionLag0010037
SyntenyLag0010037
Gene Ontology termsGO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process)
GO:0006412 - translation (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0000214 - tRNA-intron endonuclease complex (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0000213 - tRNA-intron endonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005680 - Ribosomal protein S23, eukaryotic/archaeal
IPR006032 - Ribosomal protein S12/S23
IPR006676 - tRNA-splicing endonuclease
IPR006677 - tRNA intron endonuclease, catalytic domain-like
IPR006678 - tRNA intron endonuclease, N-terminal
IPR011856 - tRNA endonuclease-like domain superfamily
IPR012340 - Nucleic acid-binding, OB-fold
IPR036167 - tRNA intron endonuclease, catalytic domain-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605517.1 tRNA-splicing endonuclease subunit Sen2-2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-12391.14Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MG RWKGKGSEAKALADPMSKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSYHLNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVTRWSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

KAG7035455.1 tRNA-splicing endonuclease subunit Sen2-2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-12391.14Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MG RWKGKGSEAKALADPMSKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSYHLNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVTRWSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

XP_022947592.1 tRNA-splicing endonuclease subunit Sen2-1-like isoform X1 [Cucurbita moschata]6.8e-12490.72Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY+LNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVTRWSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

XP_022947593.1 tRNA-splicing endonuclease subunit Sen2-1-like isoform X2 [Cucurbita moschata]6.8e-12490.72Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY+LNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVTRWSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

XP_023532286.1 tRNA-splicing endonuclease subunit Sen2-1-like [Cucurbita pepo subsp. pepo]2.7e-12591.56Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADPMSKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSYHLNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVTRWSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

TrEMBL top hitse value%identityAlignment
A0A6J1CYW3 tRNA-intron lyase4.0e-12289.54Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADPMSKIVL LQSSLT+SDAQGLLSGCSVLYQADEEQ DL NRACFGRPIVTA+KDKQWFQ G+EEAFYLS HL CLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG-HNENGRLRVWSDFLCTIRLCGSVAKTLLVL
        EKN E+LW+YMKSQK+TFPEFYKAYQ+LRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEG G  NENGRLRVWSDFLCTIRLCGSVAKTLLVL
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG-HNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAK
        ++NNNGSSS+SP FL SY+IEE TVTRWSPEQCRENPAK
Subjt:  TINNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAK

A0A6J1G6W2 tRNA-intron lyase3.3e-12490.72Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY+LNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVTRWSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

A0A6J1G716 tRNA-intron lyase3.3e-12490.72Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADP+SKIVL LQSSLT+SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYLSY+LNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        EKNF+ELW YMKSQK+TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVTRWSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

A0A6J1L2V2 tRNA-intron lyase5.2e-12289.45Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADPMSKIV  LQSSL +SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYL YHLNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        E NFEELW YMKSQ +TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVT WSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

A0A6J1L4U3 tRNA-intron lyase5.2e-12289.45Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        MGPRWKGKGSEAKALADPMSKIV  LQSSL +SDAQGLLS CSVLYQADEEQA+LLNRACFGRPIV+AEKDKQWFQFGMEEAFYL YHLNCLKI+DGQDC
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
        E NFEELW YMKSQ +TFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEG NENGRLRVWSDFLCTIRLCGSVAKTLLVLT
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA
        +N+NG+ S+SP  L SY+IEE TVT WSPEQCRENPA
Subjt:  INNNGSSSISPEFLKSYTIEELTVTRWSPEQCRENPA

SwissProt top hitse value%identityAlignment
P46297 40S ribosomal protein S233.0e-7497.89Show/hide
Query:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
        MGKTRGMGA RKLK+HRRRQRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
Subjt:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL

Query:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
        IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Subjt:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS

P49201 40S ribosomal protein S23-21.1e-7196.48Show/hide
Query:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
        MGKTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
Subjt:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL

Query:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
        IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Subjt:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS

Q9M1E8 tRNA-splicing endonuclease subunit Sen2-18.4e-6955.79Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKI-IDGQD
        M PRWK KG+EAKALA+P+SK V  L+SSLT+++A G LS C+VL   + E+A+LL+R CFGR +V AEKDK+W Q   EEAF+L Y L C+KI + G+ 
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKI-IDGQD

Query:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL
         E N  +LW+ M S K  F   YKAY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV S G     N RL+VWSD  C++RL GSVAK+LLVL
Subjt:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINN--NGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAKS
         +N   N      P  L+ YT+EE T+ RWSPE  RE+  ++
Subjt:  TINN--NGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAKS

Q9M5Z9 40S ribosomal protein S232.5e-7397.18Show/hide
Query:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
        MGKT GMGA RKLKSHRR QRWADK+YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
Subjt:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL

Query:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
        IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Subjt:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS

Q9SF35 40S ribosomal protein S23-15.0e-6994.37Show/hide
Query:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
        MGKTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
Subjt:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL

Query:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
        IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Subjt:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS

Arabidopsis top hitse value%identityAlignment
AT3G09680.1 Ribosomal protein S12/S23 family protein3.5e-7094.37Show/hide
Query:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
        MGKTRGMGAGRKLK  R  QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
Subjt:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL

Query:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
        IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Subjt:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS

AT3G45590.1 splicing endonuclease 16.0e-7055.79Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKI-IDGQD
        M PRWK KG+EAKALA+P+SK V  L+SSLT+++A G LS C+VL   + E+A+LL+R CFGR +V AEKDK+W Q   EEAF+L Y L C+KI + G+ 
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKI-IDGQD

Query:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL
         E N  +LW+ M S K  F   YKAY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV S G     N RL+VWSD  C++RL GSVAK+LLVL
Subjt:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINN--NGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAKS
         +N   N      P  L+ YT+EE T+ RWSPE  RE+  ++
Subjt:  TINN--NGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAKS

AT3G45590.2 splicing endonuclease 16.0e-7055.79Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKI-IDGQD
        M PRWK KG+EAKALA+P+SK V  L+SSLT+++A G LS C+VL   + E+A+LL+R CFGR +V AEKDK+W Q   EEAF+L Y L C+KI + G+ 
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKI-IDGQD

Query:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL
         E N  +LW+ M S K  F   YKAY +LR KNW+VR G QYGVDFV YRHHP+LVHSE+AVLV S G     N RL+VWSD  C++RL GSVAK+LLVL
Subjt:  CEKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVL

Query:  TINN--NGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAKS
         +N   N      P  L+ YT+EE T+ RWSPE  RE+  ++
Subjt:  TINN--NGSSSISPEFLKSYTIEELTVTRWSPEQCRENPAKS

AT5G02960.1 Ribosomal protein S12/S23 family protein7.6e-7396.48Show/hide
Query:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
        MGKTRGMGAGRKLK  R  QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL
Subjt:  MGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVL

Query:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
        IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS
Subjt:  IAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS

AT5G60230.1 splicing endonuclease 26.0e-7054.85Show/hide
Query:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC
        M PRWK KG+EAKALA+P+SK V  LQ SL  +++ G LS C+VL   + EQA+LL+R CFGR +++AEK K+W Q   EEAF+L Y+L C+KI     C
Subjt:  MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDC

Query:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT
         +N  + W YMKS++  FP F+KAY +LR KNWV+R G QYGVDFVAYRHHP+LVHSE++VLV S      ++ RLRVWSD  C +RL GSVAKTLL L 
Subjt:  EKNFEELWQYMKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLT

Query:  INNN--GSSSISPEFLKSYTIEELTVTRWSPEQCREN
        +N N  G        L+++T+EE T++RWSPE  RE+
Subjt:  INNN--GSSSISPEFLKSYTIEELTVTRWSPEQCREN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCCAAGATGGAAGGGGAAGGGTTCAGAAGCCAAAGCTCTAGCTGATCCCATGTCGAAGATTGTACTTCACCTTCAATCGTCTCTAACACGGTCGGATGCTCAAGG
ATTATTATCTGGTTGCAGTGTGCTTTATCAAGCAGATGAAGAACAAGCTGATCTTCTTAATCGTGCTTGTTTTGGTCGACCAATTGTTACAGCCGAGAAGGATAAACAAT
GGTTTCAATTCGGCATGGAGGAGGCTTTTTACTTGTCCTATCACTTGAATTGCCTTAAAATTATCGATGGACAGGATTGTGAAAAGAATTTTGAAGAGCTCTGGCAGTAT
ATGAAGTCCCAAAAGTCTACATTCCCTGAGTTTTACAAGGCTTATCAAAATCTTCGGATGAAGAATTGGGTTGTGAGACCTGGATCTCAATATGGGGTTGATTTTGTGGC
TTATCGTCACCATCCAGCACTCGTCCATTCTGAATTTGCGGTGCTTGTGTTGTCCGAAGGAGAAGGCCATAATGAAAATGGGCGATTGCGAGTTTGGTCTGATTTTCTTT
GCACAATTCGGCTTTGTGGAAGCGTTGCAAAAACACTGCTAGTTCTTACCATCAATAATAATGGAAGCAGTTCTATTTCTCCTGAGTTTTTGAAAAGTTACACAATTGAA
GAGCTCACAGTTACAAGATGGAGTCCAGAACAGTGCCGGGAAAATCCTGCAAAATCAAGGAACCTCTTACAAGATAATGAATTGTGTGGGGAAATGGAAACCGTGGAGTT
TGAAAAGGAAGGACAATCACAGTTGATTGGTGCTTATGGCTGCACGGCGAAAAAGACAATCACAGTTGATTGGTGCTTATGGCTGCACGGCGAAAAAGTAGCAATACGGA
AGCACTTGTCTGATTCTTTTTTCCATCCAAGATGGTCTCTTCCTCCAACATCCTACAGCTTTTGGTGCAGGAGGGAATTCACAGACGGTGCGGCGGCGTCATTCAAATCA
TCTTCGTCTCTACCGGTTCCGGAACTCTTCTACCCTAATCTCGCACTCGGAGATCCTCTTCTCACACTCACCATGGGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTT
GAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGGAACGAGTGGAAGAAACCATTTGCCGGATCTTCCCATGCGAAAGGCATTG
TTCTAGAAAAGATTGGTATTGAGGCCAAGCAGCCTAACTCTGCTATTAGGAAGTGTGCTAGAGTTCAGCTTATTAAGAACGGGAAGAAGATTGCTGCCTTTGTGCCCAAT
GATGGTTGTTTGAACTACATTGAAGAGAATGACGAGGTGCTCATTGCTGGATTTGGTAGAAAAGGACATGCTGTCGGAGATATTCCCGGAGTCAGATTTAAGGTGGTGAA
GGTGTCAGGTGTATCTCTTCTGGCTCTCTTCAAGGAAAAGAAGGAGAAGCCAAGGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCCAAGATGGAAGGGGAAGGGTTCAGAAGCCAAAGCTCTAGCTGATCCCATGTCGAAGATTGTACTTCACCTTCAATCGTCTCTAACACGGTCGGATGCTCAAGG
ATTATTATCTGGTTGCAGTGTGCTTTATCAAGCAGATGAAGAACAAGCTGATCTTCTTAATCGTGCTTGTTTTGGTCGACCAATTGTTACAGCCGAGAAGGATAAACAAT
GGTTTCAATTCGGCATGGAGGAGGCTTTTTACTTGTCCTATCACTTGAATTGCCTTAAAATTATCGATGGACAGGATTGTGAAAAGAATTTTGAAGAGCTCTGGCAGTAT
ATGAAGTCCCAAAAGTCTACATTCCCTGAGTTTTACAAGGCTTATCAAAATCTTCGGATGAAGAATTGGGTTGTGAGACCTGGATCTCAATATGGGGTTGATTTTGTGGC
TTATCGTCACCATCCAGCACTCGTCCATTCTGAATTTGCGGTGCTTGTGTTGTCCGAAGGAGAAGGCCATAATGAAAATGGGCGATTGCGAGTTTGGTCTGATTTTCTTT
GCACAATTCGGCTTTGTGGAAGCGTTGCAAAAACACTGCTAGTTCTTACCATCAATAATAATGGAAGCAGTTCTATTTCTCCTGAGTTTTTGAAAAGTTACACAATTGAA
GAGCTCACAGTTACAAGATGGAGTCCAGAACAGTGCCGGGAAAATCCTGCAAAATCAAGGAACCTCTTACAAGATAATGAATTGTGTGGGGAAATGGAAACCGTGGAGTT
TGAAAAGGAAGGACAATCACAGTTGATTGGTGCTTATGGCTGCACGGCGAAAAAGACAATCACAGTTGATTGGTGCTTATGGCTGCACGGCGAAAAAGTAGCAATACGGA
AGCACTTGTCTGATTCTTTTTTCCATCCAAGATGGTCTCTTCCTCCAACATCCTACAGCTTTTGGTGCAGGAGGGAATTCACAGACGGTGCGGCGGCGTCATTCAAATCA
TCTTCGTCTCTACCGGTTCCGGAACTCTTCTACCCTAATCTCGCACTCGGAGATCCTCTTCTCACACTCACCATGGGGAAGACACGTGGAATGGGAGCTGGTCGCAAGTT
GAAGTCCCACCGTAGAAGGCAAAGGTGGGCTGACAAAGCATACAAGAAATCCCATCTTGGGAACGAGTGGAAGAAACCATTTGCCGGATCTTCCCATGCGAAAGGCATTG
TTCTAGAAAAGATTGGTATTGAGGCCAAGCAGCCTAACTCTGCTATTAGGAAGTGTGCTAGAGTTCAGCTTATTAAGAACGGGAAGAAGATTGCTGCCTTTGTGCCCAAT
GATGGTTGTTTGAACTACATTGAAGAGAATGACGAGGTGCTCATTGCTGGATTTGGTAGAAAAGGACATGCTGTCGGAGATATTCCCGGAGTCAGATTTAAGGTGGTGAA
GGTGTCAGGTGTATCTCTTCTGGCTCTCTTCAAGGAAAAGAAGGAGAAGCCAAGGTCTTAA
Protein sequenceShow/hide protein sequence
MGPRWKGKGSEAKALADPMSKIVLHLQSSLTRSDAQGLLSGCSVLYQADEEQADLLNRACFGRPIVTAEKDKQWFQFGMEEAFYLSYHLNCLKIIDGQDCEKNFEELWQY
MKSQKSTFPEFYKAYQNLRMKNWVVRPGSQYGVDFVAYRHHPALVHSEFAVLVLSEGEGHNENGRLRVWSDFLCTIRLCGSVAKTLLVLTINNNGSSSISPEFLKSYTIE
ELTVTRWSPEQCRENPAKSRNLLQDNELCGEMETVEFEKEGQSQLIGAYGCTAKKTITVDWCLWLHGEKVAIRKHLSDSFFHPRWSLPPTSYSFWCRREFTDGAAASFKS
SSSLPVPELFYPNLALGDPLLTLTMGKTRGMGAGRKLKSHRRRQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPN
DGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS