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Lag0010042 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010042
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCarbamoyl-phosphate synthase (glutamine-hydrolyzing)
Genome locationchr9:44200912..44201375
RNA-Seq ExpressionLag0010042
SyntenyLag0010042
Gene Ontology termsGO:0006221 - pyrimidine nucleotide biosynthetic process (biological process)
GO:0000166 - nucleotide binding (molecular function)
GO:0016874 - ligase activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592126.1 Carbamoyl-phosphate synthase large chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.0e-0846.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + +  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

XP_022139363.1 carbamoyl-phosphate synthase large chain, chloroplastic [Momordica charantia]5.9e-0947.62Show/hide
Query:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        V  LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + L  E  L    PR
Subjt:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

XP_022936315.1 carbamoyl-phosphate synthase large chain, chloroplastic-like [Cucurbita moschata]1.0e-0846.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + +  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

XP_022976632.1 carbamoyl-phosphate synthase large chain, chloroplastic-like [Cucurbita maxima]1.0e-0846.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + +  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

XP_023535344.1 carbamoyl-phosphate synthase large chain, chloroplastic-like [Cucurbita pepo subsp. pepo]1.0e-0846.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + +  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

TrEMBL top hitse value%identityAlignment
A0A6J1CFG0 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)2.8e-0947.62Show/hide
Query:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        V  LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + L  E  L    PR
Subjt:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

A0A6J1FDA9 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)4.8e-0946.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + +  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

A0A6J1FJE6 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)8.3e-0946.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP ++IPSSCLDT+++            GL N Q  + L  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

A0A6J1IGA6 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)4.8e-0946.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP +TIPSSCLDT+++            GL N Q  + +  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

A0A6J1IZ99 Carbamoyl-phosphate synthase (glutamine-hydrolyzing)8.3e-0946.91Show/hide
Query:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR
        LAD  GN+TI  +MEHIELAGVH G + C+LP ++IPSSCLDT+++            GL N Q  + L  E  L    PR
Subjt:  LADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGP----------GLHNWQKGLGLDFEFLLDMLKPR

SwissProt top hitse value%identityAlignment
A5UKG5 Carbamoyl-phosphate synthase large chain7.7e-0437.93Show/hide
Query:  IKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGPGLHNWQKGLGLDFEFLLDM
        I  +MEHIE AGVH G + C +P +TIP   L+T++     ++ +  L LD + L+++
Subjt:  IKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGPGLHNWQKGLGLDFEFLLDM

B9EXM2 Carbamoyl-phosphate synthase large chain, chloroplastic1.5e-0751.02Show/hide
Query:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS
        V  LAD  GN+ I  +MEHIE AG+H G + C+LP RT+ + CLD ++S
Subjt:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS

Q42601 Carbamoyl-phosphate synthase large chain, chloroplastic1.1e-0753.06Show/hide
Query:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS
        V  L D  GN+ I  +MEHIE AGVH G + C LP +TIP+SCL T+++
Subjt:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS

Q8TUT7 Carbamoyl-phosphate synthase large chain, C-terminal section4.5e-0447.62Show/hide
Query:  DLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTV
        D  GN+ I  +MEHIE AGVH G + C +P +T+P    +TV
Subjt:  DLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTV

Q8YQL2 Carbamoyl-phosphate synthase large chain5.9e-0438.78Show/hide
Query:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS
        V  +AD  G + I  +MEHIE AG+H G + C+LP  ++P + L+ +++
Subjt:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS

Arabidopsis top hitse value%identityAlignment
AT1G29900.1 carbamoyl phosphate synthetase B8.2e-0953.06Show/hide
Query:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS
        V  L D  GN+ I  +MEHIE AGVH G + C LP +TIP+SCL T+++
Subjt:  VFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAATAAATTGGTGTTTGTGCTAGCTGATTTAGATGGTAATATGACAATCAAGTGGATGATGGAGCATATTGAGTTGGCTGGGGTTCATGTTGGATACACTGGTTG
TACACTTCCAATGAGAACAATCCCCTCCTCTTGCCTTGATACTGTACAATCCGGTCCTGGATTACATAATTGGCAAAAAGGTCTTGGTCTTGATTTTGAGTTCCTATTGG
ATATGCTAAAGCCCAGACTGTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAAATAAATTGGTGTTTGTGCTAGCTGATTTAGATGGTAATATGACAATCAAGTGGATGATGGAGCATATTGAGTTGGCTGGGGTTCATGTTGGATACACTGGTTG
TACACTTCCAATGAGAACAATCCCCTCCTCTTGCCTTGATACTGTACAATCCGGTCCTGGATTACATAATTGGCAAAAAGGTCTTGGTCTTGATTTTGAGTTCCTATTGG
ATATGCTAAAGCCCAGACTGTTGTAG
Protein sequenceShow/hide protein sequence
MLNKLVFVLADLDGNMTIKWMMEHIELAGVHVGYTGCTLPMRTIPSSCLDTVQSGPGLHNWQKGLGLDFEFLLDMLKPRLL