; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010058 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010058
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationchr9:44319333..44319656
RNA-Seq ExpressionLag0010058
SyntenyLag0010058
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]1.3e-4090.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR  STSA+ STGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_008463929.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]1.7e-4090.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR  STSA  STGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

XP_022140347.1 protein transport protein Sec61 subunit beta [Momordica charantia]5.3e-4292.52Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGV APRGSAAATAGLRRRRL ST +AGS G+VG GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARS AGV
Subjt:  ARSAAGV

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]1.3e-4395.33Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRL STS AG+TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]4.8e-4395.33Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARG SQSQS SSSTSRPGVVAPRGSAAATAGLRRRR  STSAA STGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta6.3e-4190.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR  STSA+ STGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A5D3CTD4 Protein transport protein Sec61 subunit beta8.3e-4190.83Show/hide
Query:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
        MARG SQSQS++S  ST+RPGVVAPRGSAAATAGLRRRR  STSA  STGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL
Subjt:  MARGTSQSQSASS--STSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKL

Query:  YRARSAAGV
        YRARSAAGV
Subjt:  YRARSAAGV

A0A6J1CGL0 Protein transport protein Sec61 subunit beta2.6e-4292.52Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGV APRGSAAATAGLRRRRL ST +AGS G+VG GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARS AGV
Subjt:  ARSAAGV

A0A6J1H102 Protein transport protein Sec61 subunit beta6.1e-4495.33Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRL STS AG+TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

A0A6J1JZ65 Protein transport protein Sec61 subunit beta6.1e-4495.33Show/hide
Query:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR
        MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRL STS AG+TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFGKLYR
Subjt:  MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYR

Query:  ARSAAGV
        ARSAAGV
Subjt:  ARSAAGV

SwissProt top hitse value%identityAlignment
P38389 Protein transport protein Sec61 subunit beta3.1e-1667.95Show/hide
Query:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG     GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

P60467 Protein transport protein Sec61 subunit beta5.8e-0740.21Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T +AG T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

P60468 Protein transport protein Sec61 subunit beta5.8e-0740.21Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T +AG T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Q5RB31 Protein transport protein Sec61 subunit beta5.8e-0740.21Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T +AG T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Q9CQS8 Protein transport protein Sec61 subunit beta5.8e-0740.21Show/hide
Query:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA
        T    +  SS   P       +A +T   R+     T +AG T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++GK  R+
Subjt:  TSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRA

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein2.2e-1767.95Show/hide
Query:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG     GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein2.2e-1767.95Show/hide
Query:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG     GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein2.2e-1767.95Show/hide
Query:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG     GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein2.2e-1767.95Show/hide
Query:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY
        RGSAAATA +RRR+   TS AG     GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY
Subjt:  RGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLY

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein1.3e-3071.3Show/hide
Query:  MARGTSQSQ---SASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK
        MARG+SQSQ   S  SST+RPG+ APRGSAAATAG+RRRRL       S G  G G SG  NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVFGK
Subjt:  MARGTSQSQ---SASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGK

Query:  LYRARSAA
        LY  +S +
Subjt:  LYRARSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGGCACTTCTCAATCCCAATCCGCATCCTCCTCCACCTCCAGGCCCGGAGTCGTGGCCCCGCGCGGCTCCGCGGCGGCGACGGCGGGCCTCCGCCGTCGCCG
TCTCGCCTCTACTTCCGCCGCCGGCTCTACTGGACTTGTTGGCGGCGGATCAAGCGGCGGCGGCAACATGCTGAGGTTCTACACTGACGATGCTCCTGGCTTGAAGATTT
CTCCCACCGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGATTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTATCGCGCGCGATCCGCCGCTGGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGAGGCACTTCTCAATCCCAATCCGCATCCTCCTCCACCTCCAGGCCCGGAGTCGTGGCCCCGCGCGGCTCCGCGGCGGCGACGGCGGGCCTCCGCCGTCGCCG
TCTCGCCTCTACTTCCGCCGCCGGCTCTACTGGACTTGTTGGCGGCGGATCAAGCGGCGGCGGCAACATGCTGAGGTTCTACACTGACGATGCTCCTGGCTTGAAGATTT
CTCCCACCGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGATTCGTCACCGGCCTCCACGTCTTTGGTAAGCTCTATCGCGCGCGATCCGCCGCTGGAGTTTAA
Protein sequenceShow/hide protein sequence
MARGTSQSQSASSSTSRPGVVAPRGSAAATAGLRRRRLASTSAAGSTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGKLYRARSAAGV