; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010101 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010101
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description50S ribosomal protein L18
Genome locationchr9:44651574..44651960
RNA-Seq ExpressionLag0010101
SyntenyLag0010101
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR005484 - Ribosomal protein L18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022140774.1 uncharacterized protein LOC111011356 [Momordica charantia]1.8e-5792.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKG KN TKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVNSL+N GVKL+LDDNV  ASRP YQ
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

XP_022943852.1 uncharacterized protein LOC111448460 [Cucurbita moschata]2.2e-5892.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVNSLKN+GVKL+LD+N  DASRPSY+
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

XP_022985582.1 uncharacterized protein LOC111483610 [Cucurbita maxima]1.1e-5792.19Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVNSLKN+GVKL+LD+N  DA RPSY+
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

XP_023511782.1 uncharacterized protein LOC111776697 [Cucurbita pepo subsp. pepo]1.7e-5893.75Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+DVNKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVNSLKN+GVKL+LD+N  DASRPSY+
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

XP_038901007.1 uncharacterized protein LOC120088052 [Benincasa hispida]1.3e-5894.53Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH DVNKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVN+LKN+GVKL+LD+NV DASR SYQ
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

TrEMBL top hitse value%identityAlignment
A0A5C7GTN9 Uncharacterized protein2.9e-5690.55Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGRIV TASTVEHSIK SLECGRSCNAKAAA+VGEVLAMRLKV+GLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSY
        AIVNSLKN+G+KL+L+DN  + SRPSY
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSY

A0A6J1CGQ4 uncharacterized protein LOC1110113568.9e-5892.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGR+VATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKG KN TKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVNSL+N GVKL+LDDNV  ASRP YQ
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

A0A6J1FXG0 uncharacterized protein LOC1114484601.1e-5892.97Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVNSLKN+GVKL+LD+N  DASRPSY+
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

A0A6J1JBQ5 uncharacterized protein LOC1114836105.2e-5892.19Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYV+RLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIH+D+NKEIEKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ
        AIVNSLKN+GVKL+LD+N  DA RPSY+
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSYQ

A0A6P3ZI60 uncharacterized protein LOC1074114749.9e-5791.34Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLFISLKYITANVVDRNNGR VAT+STVEHSIKGSLECGRSCNAKAA+VVGEVLAMRLKV+GLEQGQGRGIHVDVNKE+EKKGFKNRTKIW
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGDASRPSY
        AIVNSLKN+GVKL+LDDN  ++SRPSY
Subjt:  AIVNSLKNSGVKLVLDDNVGDASRPSY

SwissProt top hitse value%identityAlignment
A9M3V0 50S ribosomal protein L182.5e-0428.7Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNSGV
         + + +G+
Subjt:  NSLKNSGV

Q5F5U3 50S ribosomal protein L182.5e-0428.7Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNSGV
         + + +G+
Subjt:  NSLKNSGV

Q5P316 50S ribosomal protein L181.9e-0430.28Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F +  +I A V+D +  R++A ASTVE  ++  L  G   N +AA VVG+++A R K  G+E               ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNSGVK
         + +  G+K
Subjt:  NSLKNSGVK

Q7DDT0 50S ribosomal protein L182.5e-0428.7Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNSGV
         + + +G+
Subjt:  NSLKNSGV

Q9JQQ6 50S ribosomal protein L182.5e-0428.7Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK   L +F S  +I A V+     +++A AST+E  ++GSL+ G   N +AAA+VG+ +A + K  G+E+              ++ GF+   ++ A+ 
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNSGV
         + + +G+
Subjt:  NSLKNSGV

Arabidopsis top hitse value%identityAlignment
AT3G45020.1 Ribosomal L18p/L5e family protein3.2e-5280.99Show/hide
Query:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW
        MTVLKRYVLRLF+S+KYITANVVDRNNGRIV TASTVEH+IK SLECGR+CNAKAAA+VGEVLAMRLKV+GL+ GQGRGIH DV KEIEKKGFK+RTK+W
Subjt:  MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIW

Query:  AIVNSLKNSGVKLVLDDNVGD
        A++NSL+N+GV L+LDD+  D
Subjt:  AIVNSLKNSGVKLVLDDNVGD

AT5G27820.1 Ribosomal L18p/L5e family protein2.5e-0425.23Show/hide
Query:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV
        LK YVL++  + K++ A V+      +  +AS+ E +++ +++  R  +  AA+ +G++L  RL +  +       + + + KE    G     K+ A++
Subjt:  LKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIV

Query:  NSLKNSGVKLV
        +S++ +GVKL+
Subjt:  NSLKNSGVKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTATTAAAGCGCTACGTGCTGCGATTATTCATATCTTTGAAGTACATAACAGCCAATGTGGTAGATAGAAATAATGGACGGATTGTTGCAACTGCGTCCACAGT
TGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAATGCTAAGGCAGCCGCAGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTCGACGGTCTTGAAC
AGGGGCAAGGAAGAGGGATTCATGTAGATGTAAACAAGGAAATCGAGAAGAAAGGCTTCAAAAACCGCACAAAAATCTGGGCCATAGTCAACTCACTCAAGAATAGCGGA
GTTAAACTTGTTCTCGACGACAATGTTGGAGATGCATCTCGGCCAAGTTATCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTATTAAAGCGCTACGTGCTGCGATTATTCATATCTTTGAAGTACATAACAGCCAATGTGGTAGATAGAAATAATGGACGGATTGTTGCAACTGCGTCCACAGT
TGAACACTCCATCAAGGGCTCACTTGAATGTGGCCGGTCTTGTAATGCTAAGGCAGCCGCAGTTGTTGGAGAGGTGTTGGCTATGCGACTCAAAGTCGACGGTCTTGAAC
AGGGGCAAGGAAGAGGGATTCATGTAGATGTAAACAAGGAAATCGAGAAGAAAGGCTTCAAAAACCGCACAAAAATCTGGGCCATAGTCAACTCACTCAAGAATAGCGGA
GTTAAACTTGTTCTCGACGACAATGTTGGAGATGCATCTCGGCCAAGTTATCAATAA
Protein sequenceShow/hide protein sequence
MTVLKRYVLRLFISLKYITANVVDRNNGRIVATASTVEHSIKGSLECGRSCNAKAAAVVGEVLAMRLKVDGLEQGQGRGIHVDVNKEIEKKGFKNRTKIWAIVNSLKNSG
VKLVLDDNVGDASRPSYQ