; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010121 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010121
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSerine/arginine repetitive matrix protein 1-like
Genome locationchr9:44797858..44798517
RNA-Seq ExpressionLag0010121
SyntenyLag0010121
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037301.1 serine/arginine repetitive matrix protein 1-like [Cucumis melo var. makuwa]1.7e-7470.67Show/hide
Query:  MSTPP---PSNASPGTLT---------NDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA
        MSTP    PSNASP TLT         N   Q+HFTDEDE++LL  YLQI+RS NP KNS PTLDSPA  R++ A+G KFSHS IADKLHRLKL YHKFA
Subjt:  MSTPP---PSNASPGTLT---------NDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA

Query:  RTKSFIKTPHHRRILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE
        RTKSFIKTPH R+IL+ GRSIWGKS TP   KPQV+  SR++SRRIK+RS  R+EG    +DLKNFPVLV+EFS+QFPGNGVWREGLR MEE++LK MNE
Subjt:  RTKSFIKTPHHRRILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE

Query:  KWVLLHIEEAELKARRAALLQQQLR
        KWVLLHIE AELKARRAALL+QQL+
Subjt:  KWVLLHIEEAELKARRAALLQQQLR

KAG6570827.1 hypothetical protein SDJN03_29742, partial [Cucurbita argyrosperma subsp. sororia]5.9e-8075.59Show/hide
Query:  MSTP---PPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTP
        MSTP   PPSNASP TLT      HF++EDEL+LLNCYLQIARSANP  NSQPTLDSPAL RIE AL  KF++SHIADKLHRLKLQYHK ARTKS IKTP
Subjt:  MSTP---PPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTP

Query:  HHRRILETGRSIWGKSLTPRIKPQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKAR
        HHRRILE GRSIWGK  T R KPQ + R I RRIK+RS + ++G VDL +FPVL+SEFSR+FPGNGVW+EGLRGMEE+SL+ MNEKWVLLHIEEAELKAR
Subjt:  HHRRILETGRSIWGKSLTPRIKPQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKAR

Query:  RAALLQQQLRITE
        RAALLQ+QLR+ +
Subjt:  RAALLQQQLRITE

KAG6606028.1 hypothetical protein SDJN03_03345, partial [Cucurbita argyrosperma subsp. sororia]2.9e-7975Show/hide
Query:  MSTP---PP-------SNASPGTLT---NDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKF
        MSTP   PP       S+A+P  LT    +QLQVHFTDEDELDLLNCYL++A S    KNSQPTLDSPAL RI  ALGHKF HSHIADKLHRLK+QYHKF
Subjt:  MSTP---PP-------SNASPGTLT---NDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKF

Query:  ARTKSFIKTPHHRRILETGRSIWGKSLTPRIKPQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLL
        ARTKSFIKTPHH RILE GRSIWGK   PR KPQ    VISRRI+ RSVA+++G VDLKNFPVLVSEFSRQFPGNGVWREGL+GMEE SLKGMNEKWVLL
Subjt:  ARTKSFIKTPHHRRILETGRSIWGKSLTPRIKPQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLL

Query:  HIEEAELKARRAALLQQQLRITET
        HIEEAELKARR AL+Q+Q+  T+T
Subjt:  HIEEAELKARRAALLQQQLRITET

KGN46890.1 hypothetical protein Csa_020607 [Cucumis sativus]1.6e-7772.73Show/hide
Query:  PPSNASPGTLT--NDQL-QVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR
        PPS+ASP TLT  N+Q+ Q+HF DEDE++LLN YLQI+RS NP KNS PTLDS A  R++ A+G KFSHS IADKLHRLKL YHKFARTKSFIKTPH R+
Subjt:  PPSNASPGTLT--NDQL-QVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR

Query:  ILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK
        IL+ GRSIWGKS TP   KPQV+  SR++SRRIK+RS+ R+EG    VDLKNFPVLV+EFSRQFPGNGVWR+GLR M E++LK MNEKWVLLHIE AELK
Subjt:  ILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK

Query:  ARRAALLQQQLRITETSQDV
        ARRAALL++QLR TET++DV
Subjt:  ARRAALLQQQLRITETSQDV

XP_022756636.1 probable transcription factor At1g61730 [Durio zibethinus]2.4e-3340.58Show/hide
Query:  MSTPPPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHR
        MSTP PS     T  N +    F++ DE  +L C ++  +S +P      T+ +P + RI   L ++FS S I DK+ RL+++YHK ARTKS ++T H R
Subjt:  MSTPPPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHR

Query:  RILETGRSIWGKSLTPRIKPQVVSRVISRRIKER-SVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRA
        RI +  + IWGK +TP            ++ KER    + +G  DL  FP LV+EFSR  P N VW+E ++G+EE  LK M+++WVL+ +EEA+L A++A
Subjt:  RILETGRSIWGKSLTPRIKPQVVSRVISRRIKER-SVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRA

Query:  ALLQQQL
         L+Q+Q+
Subjt:  ALLQQQL

TrEMBL top hitse value%identityAlignment
A0A0A0KAX7 Uncharacterized protein7.8e-7872.73Show/hide
Query:  PPSNASPGTLT--NDQL-QVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR
        PPS+ASP TLT  N+Q+ Q+HF DEDE++LLN YLQI+RS NP KNS PTLDS A  R++ A+G KFSHS IADKLHRLKL YHKFARTKSFIKTPH R+
Subjt:  PPSNASPGTLT--NDQL-QVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRR

Query:  ILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK
        IL+ GRSIWGKS TP   KPQV+  SR++SRRIK+RS+ R+EG    VDLKNFPVLV+EFSRQFPGNGVWR+GLR M E++LK MNEKWVLLHIE AELK
Subjt:  ILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELK

Query:  ARRAALLQQQLRITETSQDV
        ARRAALL++QLR TET++DV
Subjt:  ARRAALLQQQLRITETSQDV

A0A5A7T6T1 Serine/arginine repetitive matrix protein 1-like8.1e-7570.67Show/hide
Query:  MSTPP---PSNASPGTLT---------NDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA
        MSTP    PSNASP TLT         N   Q+HFTDEDE++LL  YLQI+RS NP KNS PTLDSPA  R++ A+G KFSHS IADKLHRLKL YHKFA
Subjt:  MSTPP---PSNASPGTLT---------NDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFA

Query:  RTKSFIKTPHHRRILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE
        RTKSFIKTPH R+IL+ GRSIWGKS TP   KPQV+  SR++SRRIK+RS  R+EG    +DLKNFPVLV+EFS+QFPGNGVWREGLR MEE++LK MNE
Subjt:  RTKSFIKTPHHRRILETGRSIWGKSLTP-RIKPQVV--SRVISRRIKERSVARREGA---VDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNE

Query:  KWVLLHIEEAELKARRAALLQQQLR
        KWVLLHIE AELKARRAALL+QQL+
Subjt:  KWVLLHIEEAELKARRAALLQQQLR

A0A6A2Z6N0 Uncharacterized protein2.9e-3240.78Show/hide
Query:  MSTPPPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHR
        MSTPPP      T  N +    F++ DE+ +L C ++  +S +P      T+ +P + RI   L  KFS S I DKL RL+ +YHK AR KS ++T H R
Subjt:  MSTPPPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHR

Query:  RILETGRSIWGKSLTPRIKPQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRAA
        RI +  + IWGK   PR           ++  E    + +G  +L NF  LV+EFSR  PGN VW+E + GM E  L+ M+++WV L +EEA+L AR+A 
Subjt:  RILETGRSIWGKSLTPRIKPQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRAA

Query:  LLQQQL
        L+QQQ+
Subjt:  LLQQQL

A0A6P3Z773 probable transcription factor At1g617301.9e-3144.62Show/hide
Query:  FTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRRILETGRSIWGKSLTPRIKPQV
        FT+EDE  LL  +  I +S+ P+      ++SP L RIE +LG +FSH+ I DKL RL+L+YHK ARTKS IKT H R + +  R IWG+      K   
Subjt:  FTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRRILETGRSIWGKSLTPRIKPQV

Query:  VSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRAALLQQQLRI
             +   KE+   +R G V L+ FPVL  E      GN VW++GL G+EE++LKG+NEKW+LL +EEAE+ A RA L ++ + +
Subjt:  VSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRAALLQQQLRI

A0A6P5ZW34 probable transcription factor At1g617301.2e-3340.58Show/hide
Query:  MSTPPPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHR
        MSTP PS     T  N +    F++ DE  +L C ++  +S +P      T+ +P + RI   L ++FS S I DK+ RL+++YHK ARTKS ++T H R
Subjt:  MSTPPPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHR

Query:  RILETGRSIWGKSLTPRIKPQVVSRVISRRIKER-SVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRA
        RI +  + IWGK +TP            ++ KER    + +G  DL  FP LV+EFSR  P N VW+E ++G+EE  LK M+++WVL+ +EEA+L A++A
Subjt:  RILETGRSIWGKSLTPRIKPQVVSRVISRRIKER-SVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRA

Query:  ALLQQQL
         L+Q+Q+
Subjt:  ALLQQQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGCCGCCGCCGTCCAACGCCTCTCCCGGAACCCTAACCAACGATCAACTTCAAGTCCATTTCACCGACGAAGACGAACTCGATCTCCTCAATTGCTACCTCCA
AATCGCCAGATCCGCAAACCCCGCCAAGAATTCTCAGCCCACTCTCGATTCTCCCGCCTTGGGCCGCATCGAGGCCGCTCTCGGCCACAAATTCAGCCACTCCCACATAG
CCGATAAGCTCCACAGGCTCAAGCTCCAGTACCACAAGTTCGCAAGAACCAAGTCCTTCATCAAAACCCCCCACCACCGTCGGATTCTCGAGACCGGCCGCAGCATCTGG
GGAAAATCCCTCACGCCCAGGATAAAACCGCAGGTAGTTTCACGGGTGATTTCACGCAGAATCAAAGAAAGATCAGTTGCGAGGAGAGAAGGGGCGGTTGATCTGAAGAA
CTTTCCTGTTCTTGTGAGTGAATTTTCTCGGCAGTTCCCGGGAAATGGGGTGTGGAGAGAGGGGCTGAGGGGAATGGAGGAGAGGAGTTTGAAGGGTATGAACGAGAAGT
GGGTTTTGTTGCATATTGAAGAGGCAGAGCTCAAGGCTAGAAGGGCTGCGTTATTACAGCAGCAACTTAGAATTACAGAGACTTCTCAAGATGTCAAATCACATTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGCCGCCGCCGTCCAACGCCTCTCCCGGAACCCTAACCAACGATCAACTTCAAGTCCATTTCACCGACGAAGACGAACTCGATCTCCTCAATTGCTACCTCCA
AATCGCCAGATCCGCAAACCCCGCCAAGAATTCTCAGCCCACTCTCGATTCTCCCGCCTTGGGCCGCATCGAGGCCGCTCTCGGCCACAAATTCAGCCACTCCCACATAG
CCGATAAGCTCCACAGGCTCAAGCTCCAGTACCACAAGTTCGCAAGAACCAAGTCCTTCATCAAAACCCCCCACCACCGTCGGATTCTCGAGACCGGCCGCAGCATCTGG
GGAAAATCCCTCACGCCCAGGATAAAACCGCAGGTAGTTTCACGGGTGATTTCACGCAGAATCAAAGAAAGATCAGTTGCGAGGAGAGAAGGGGCGGTTGATCTGAAGAA
CTTTCCTGTTCTTGTGAGTGAATTTTCTCGGCAGTTCCCGGGAAATGGGGTGTGGAGAGAGGGGCTGAGGGGAATGGAGGAGAGGAGTTTGAAGGGTATGAACGAGAAGT
GGGTTTTGTTGCATATTGAAGAGGCAGAGCTCAAGGCTAGAAGGGCTGCGTTATTACAGCAGCAACTTAGAATTACAGAGACTTCTCAAGATGTCAAATCACATTACTAA
Protein sequenceShow/hide protein sequence
MSTPPPSNASPGTLTNDQLQVHFTDEDELDLLNCYLQIARSANPAKNSQPTLDSPALGRIEAALGHKFSHSHIADKLHRLKLQYHKFARTKSFIKTPHHRRILETGRSIW
GKSLTPRIKPQVVSRVISRRIKERSVARREGAVDLKNFPVLVSEFSRQFPGNGVWREGLRGMEERSLKGMNEKWVLLHIEEAELKARRAALLQQQLRITETSQDVKSHY