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Lag0010178 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010178
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S acidic ribosomal protein family
Genome locationchr9:45187858..45188575
RNA-Seq ExpressionLag0010178
SyntenyLag0010178
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001859 - Trypanosoma cruzi ribosomal protein P2-like
IPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570492.1 60S acidic ribosomal protein P2B, partial [Cucurbita argyrosperma subsp. sororia]5.9e-4795.65Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDEDRIDSLLSQVKGKDI ELIASGREKLASVPSGGGAV +A PAGGAAGGGAAPAAAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

KAG7010354.1 60S acidic ribosomal protein P2B [Cucurbita argyrosperma subsp. argyrosperma]5.9e-4795.65Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDEDRIDSLLSQVKGKDI ELIASGREKLASVPSGGGAV +A PAGGAAGGGAAPAAAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022944125.1 60S acidic ribosomal protein P2B-like [Cucurbita moschata]1.7e-4694.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDEDRIDSLLSQVKGKDI ELIASGREKLASVPSGGGAV +A PAGG AGGGAAPAAAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_022986046.1 60S acidic ribosomal protein P2B-like [Cucurbita maxima]1.7e-4694.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDEDRIDSLLSQVKGKDI ELIASGREKLASVPSGGGAV +A PAGGAAGGGAAPAA EQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

XP_023512871.1 60S acidic ribosomal protein P2B-like [Cucurbita pepo subsp. pepo]5.0e-4694.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDEDRIDSLLSQVKGKDI ELIASGREKLASVPSGGGAV +A PAGGAAGGGAA AAAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A6J1DJB9 60S acidic ribosomal protein P2B-like2.7e-4592.17Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPG DDVK ILNSVG EVDEDRI+SLLSQVKGKDI ELIASGREKLASVPSGGGAVAVA PAGGAAGGGAAPAAAE+KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKE+SDDD+GFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1FYH3 60S acidic ribosomal protein P2B-like8.3e-4794.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDEDRIDSLLSQVKGKDI ELIASGREKLASVPSGGGAV +A PAGG AGGGAAPAAAEQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1GZW9 60S acidic ribosomal protein P2B-like5.0e-4493.91Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVD DRI+SLL+QVKGKDI ELIASGREKLASVPSGGGAVAVA PAGGAAGGGAAPAAAE KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1J9Z4 60S acidic ribosomal protein P2B-like8.3e-4794.78Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVK ILNSVGAEVDEDRIDSLLSQVKGKDI ELIASGREKLASVPSGGGAV +A PAGGAAGGGAAPAA EQKKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1KA82 60S acidic ribosomal protein P2B-like5.0e-4493.04Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDE+RI+SLL+QVKGKDI ELI SGREKLASVPSGGGAVAVA  AGGAAGGGAAPAAAE KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O24415 60S acidic ribosomal protein P2B6.0e-3472.17Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKV+AAYLLAVLGGNTSP  DDVK IL SVGAE DE++++ LL+++K KDI E+IA+GRE+L+SVPSGGGA+ +  PA   AGGGAAP A E KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESD+DMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P41099 60S acidic ribosomal protein P21.4e-3070.43Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKV+AA+LLA+LGGNTSP  +D+K IL SVGA+ D+D+I+ LLSQVKGKDI ELIASGRE+LASVPSGGG VAVA  AGG  G   A AA E KKEEK E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
          EESD+++GFSLFD
Subjt:  EKEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A5.6e-3273.04Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MK VAAYLLAVL GN SP  DD+  IL SVG EVD ++++ LLSQ+ GKDI ELIA+GREK ASVP GGG VAVA  A   A GGAAP AAE KKEEKVE
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-12.1e-3170.69Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV
        MKVVAA+LLAVL G  SP   D+K IL SVGAE ++ +I+ LL +VKGKD+AELIA+GREKLASVPS GGG VAVA+   G  GGG AP AAE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-24.7e-3170.69Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++ +I+ LL +VKGKD+AELIA+GREKLASVPS GGG VAVA+   G  GGG A +AAE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family3.3e-3270.69Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++ +I+ LL +VKGKD+AELIA+GREKLASVPS GGG VAVA+   G  GGG A +AAE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family3.3e-3270.69Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++ +I+ LL +VKGKD+AELIA+GREKLASVPS GGG VAVA+   G  GGG A +AAE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family3.3e-3270.69Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV
        MKVVAAYLLAVL G  SP   D+K IL SVGAE ++ +I+ LL +VKGKD+AELIA+GREKLASVPS GGG VAVA+   G  GGG A +AAE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family1.5e-3270.69Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV
        MKVVAA+LLAVL G  SP   D+K IL SVGAE ++ +I+ LL +VKGKD+AELIA+GREKLASVPS GGG VAVA+   G  GGG AP AAE KKEEK 
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPS-GGGAVAVATPAGGAAGGGAAPAAAEQKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT3G44590.2 60S acidic ribosomal protein family8.3e-3166.96Show/hide
Query:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE
        MKV AA+LLAVLGGN +P  D++K I+ +VGA+VD + I+ LL +V GKDIAELIASGREKLASVPSGGG    A P+ G  GG AAPA   +KKE K E
Subjt:  MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTGGTCGCTGCTTATTTGTTGGCCGTACTCGGTGGCAACACCAGCCCCGGACTCGATGATGTGAAGTATATTCTTAATTCAGTCGGGGCTGAGGTCGATGAAGA
CAGGATTGATTCGCTATTATCCCAAGTGAAAGGAAAGGATATCGCGGAATTGATAGCCTCCGGACGGGAGAAGTTGGCGTCAGTGCCGTCTGGTGGCGGTGCAGTCGCCG
TCGCCACCCCTGCTGGTGGTGCCGCTGGTGGTGGTGCAGCACCAGCCGCAGCCGAGCAGAAGAAAGAGGAGAAAGTCGAGGAGAAAGAAGAATCCGACGATGATATGGGT
TTCAGCCTCTTTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTGGTCGCTGCTTATTTGTTGGCCGTACTCGGTGGCAACACCAGCCCCGGACTCGATGATGTGAAGTATATTCTTAATTCAGTCGGGGCTGAGGTCGATGAAGA
CAGGATTGATTCGCTATTATCCCAAGTGAAAGGAAAGGATATCGCGGAATTGATAGCCTCCGGACGGGAGAAGTTGGCGTCAGTGCCGTCTGGTGGCGGTGCAGTCGCCG
TCGCCACCCCTGCTGGTGGTGCCGCTGGTGGTGGTGCAGCACCAGCCGCAGCCGAGCAGAAGAAAGAGGAGAAAGTCGAGGAGAAAGAAGAATCCGACGATGATATGGGT
TTCAGCCTCTTTGACTGA
Protein sequenceShow/hide protein sequence
MKVVAAYLLAVLGGNTSPGLDDVKYILNSVGAEVDEDRIDSLLSQVKGKDIAELIASGREKLASVPSGGGAVAVATPAGGAAGGGAAPAAAEQKKEEKVEEKEESDDDMG
FSLFD