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Lag0010189 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010189
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionprotein BIC2
Genome locationchr9:45299189..45299542
RNA-Seq ExpressionLag0010189
SyntenyLag0010189
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570486.1 Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3074.31Show/hide
Query:  MIPPNCSDSE-------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASAR
        M+PPN SDS         ++PAAA V GS GDS      GG EKLK CCG RERLKRHREEVAGKV VPEKWGKEELLKDWIDY AFDRILAAGRIASAR
Subjt:  MIPPNCSDSE-------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASAR

Query:  ASLAAEGRR
        ASL AEGRR
Subjt:  ASLAAEGRR

KAG7010351.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-3072.32Show/hide
Query:  MIPPNCSDSE-------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASAR
        M+PPN SDS         ++PAAA V GS GDS      GG EK K CCG RERLKRHREEVAGKV VPEKWGKEELLKDWIDY AFDRILAAGRIASAR
Subjt:  MIPPNCSDSE-------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASAR

Query:  ASLAAEGRRASS
        ASL AEGRR  S
Subjt:  ASLAAEGRRASS

KGN46948.1 hypothetical protein Csa_020684 [Cucumis sativus]5.5e-3270.4Show/hide
Query:  MIPPNCSDSE--------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA
        M+PPN SD++          +PA +  GGS GDS    GG G EKLK C GVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDY AFDRILAAGRIASA
Subjt:  MIPPNCSDSE--------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA

Query:  RASLAAEGRRASSCSRPPLRVESRC
        RASLAAEG+R S   R   RVESRC
Subjt:  RASLAAEGRRASSCSRPPLRVESRC

TYK18920.1 uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa]2.5e-2966.4Show/hide
Query:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA
        MIPPN S         +   +PA +  G S GDS       G EKLK CCGVRERLKRHREEVAGKV VPEKWGKEELLKDWIDY AFDRILAAGRIASA
Subjt:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA

Query:  RASLAAEGRRASSCSRPPLRVESRC
        RASLAAEG++    +R   RVESRC
Subjt:  RASLAAEGRRASSCSRPPLRVESRC

XP_008458586.1 PREDICTED: uncharacterized protein LOC103497945 [Cucumis melo]5.6e-2965.6Show/hide
Query:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA
        MIPPN S         +   +PA +  G S GDS       G EKLK CCGVRERLKRHREEVAGKV VP+KWGKEELLKDWIDY AFDRILAAGRIASA
Subjt:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA

Query:  RASLAAEGRRASSCSRPPLRVESRC
        RASLAAEG++    +R   RVESRC
Subjt:  RASLAAEGRRASSCSRPPLRVESRC

TrEMBL top hitse value%identityAlignment
A0A0A0KBS7 Uncharacterized protein2.6e-3270.4Show/hide
Query:  MIPPNCSDSE--------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA
        M+PPN SD++          +PA +  GGS GDS    GG G EKLK C GVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDY AFDRILAAGRIASA
Subjt:  MIPPNCSDSE--------TNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA

Query:  RASLAAEGRRASSCSRPPLRVESRC
        RASLAAEG+R S   R   RVESRC
Subjt:  RASLAAEGRRASSCSRPPLRVESRC

A0A1S3C9F3 uncharacterized protein LOC1034979452.7e-2965.6Show/hide
Query:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA
        MIPPN S         +   +PA +  G S GDS       G EKLK CCGVRERLKRHREEVAGKV VP+KWGKEELLKDWIDY AFDRILAAGRIASA
Subjt:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA

Query:  RASLAAEGRRASSCSRPPLRVESRC
        RASLAAEG++    +R   RVESRC
Subjt:  RASLAAEGRRASSCSRPPLRVESRC

A0A5A7STT7 Uncharacterized protein2.7e-2965.6Show/hide
Query:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA
        MIPPN S         +   +PA +  G S GDS       G EKLK CCGVRERLKRHREEVAGKV VP+KWGKEELLKDWIDY AFDRILAAGRIASA
Subjt:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA

Query:  RASLAAEGRRASSCSRPPLRVESRC
        RASLAAEG++    +R   RVESRC
Subjt:  RASLAAEGRRASSCSRPPLRVESRC

A0A5D3D5X1 Uncharacterized protein1.2e-2966.4Show/hide
Query:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA
        MIPPN S         +   +PA +  G S GDS       G EKLK CCGVRERLKRHREEVAGKV VPEKWGKEELLKDWIDY AFDRILAAGRIASA
Subjt:  MIPPNCSD--------SETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASA

Query:  RASLAAEGRRASSCSRPPLRVESRC
        RASLAAEG++    +R   RVESRC
Subjt:  RASLAAEGRRASSCSRPPLRVESRC

A0A6J1DHR5 protein BIC23.9e-2883.33Show/hide
Query:  GGGGEKL----KSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAEGRRASSCSRPPLRVESRC
        G G EKL    KS CGVRERLKRHREEVAGKV VPEKWGKEELLKDWIDY AFDRILAA RIA+ARASLAAEGRRA++ SRP LRVESRC
Subjt:  GGGGEKL----KSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAEGRRASSCSRPPLRVESRC

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC15.3e-1460.32Show/hide
Query:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAEGRRASSCS
        RERLK+HR E+AG+V +PE WG+EELLKDWID   FD  L    I+SAR +L  E RRA+S S
Subjt:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAEGRRASSCS

Q9M280 Protein BIC27.7e-1353.85Show/hide
Query:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAE-----GRRASSCSRPPLRVESRC
        R+RLKRHREEVAGKV +P+ WGKE LL  W+D+  FD    + +I SARA+L A+     G R S   R  LRVES C
Subjt:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAE-----GRRASSCSRPPLRVESRC

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein5.5e-1453.85Show/hide
Query:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAE-----GRRASSCSRPPLRVESRC
        R+RLKRHREEVAGKV +P+ WGKE LL  W+D+  FD    + +I SARA+L A+     G R S   R  LRVES C
Subjt:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAE-----GRRASSCSRPPLRVESRC

AT3G52740.1 unknown protein3.8e-1560.32Show/hide
Query:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAEGRRASSCS
        RERLK+HR E+AG+V +PE WG+EELLKDWID   FD  L    I+SAR +L  E RRA+S S
Subjt:  RERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAEGRRASSCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCTCCAAATTGCTCTGATTCCGAAACAAACAGCCCTGCAGCTGCCGCCGTTGGTGGGTCGGCCGGGGATTCTGGCGGCGTCGGCGGCGGCGGCGGAGGTGAGAA
ATTGAAGAGCTGTTGTGGGGTTCGGGAGCGGCTGAAGAGGCACCGTGAGGAGGTTGCCGGAAAAGTGATGGTGCCGGAGAAATGGGGGAAAGAGGAGCTGCTAAAGGATT
GGATCGACTACAGGGCGTTCGACAGAATCTTGGCCGCCGGGAGGATTGCGTCGGCGAGGGCGTCGCTTGCGGCGGAGGGACGGCGGGCGAGTTCCTGTTCACGGCCGCCG
TTGAGGGTAGAAAGTAGGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCTCCAAATTGCTCTGATTCCGAAACAAACAGCCCTGCAGCTGCCGCCGTTGGTGGGTCGGCCGGGGATTCTGGCGGCGTCGGCGGCGGCGGCGGAGGTGAGAA
ATTGAAGAGCTGTTGTGGGGTTCGGGAGCGGCTGAAGAGGCACCGTGAGGAGGTTGCCGGAAAAGTGATGGTGCCGGAGAAATGGGGGAAAGAGGAGCTGCTAAAGGATT
GGATCGACTACAGGGCGTTCGACAGAATCTTGGCCGCCGGGAGGATTGCGTCGGCGAGGGCGTCGCTTGCGGCGGAGGGACGGCGGGCGAGTTCCTGTTCACGGCCGCCG
TTGAGGGTAGAAAGTAGGTGTTGA
Protein sequenceShow/hide protein sequence
MIPPNCSDSETNSPAAAAVGGSAGDSGGVGGGGGGEKLKSCCGVRERLKRHREEVAGKVMVPEKWGKEELLKDWIDYRAFDRILAAGRIASARASLAAEGRRASSCSRPP
LRVESRC