; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010304 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010304
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionheterogeneous nuclear ribonucleoprotein F
Genome locationchr9:46222178..46223548
RNA-Seq ExpressionLag0010304
SyntenyLag0010304
Gene Ontology termsGO:1990904 - ribonucleoprotein complex (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041416.1 heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]1.0e-13796.05Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

KAG7035864.1 Heterogeneous nuclear ribonucleoprotein F, partial [Cucurbita argyrosperma subsp. argyrosperma]5.7e-13694.07Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        S+ADGGDGREMGAKRQRIVDQGSSYYGTSPG+GFMYN SPYAYV QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR+APRSKLNDEVKD AEHTG+LRLRGLPYSAGKDDI+DFFKG+ILSED IHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEFAN QDSKAAM KDRMTLGSRYIELFPSSQ+ELDEAI+RGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

TYJ96136.1 heterogeneous nuclear ribonucleoprotein H isoform X1 [Cucumis melo var. makuwa]1.0e-13796.05Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

XP_004142112.1 heterogeneous nuclear ribonucleoprotein F [Cucumis sativus]1.0e-13796.05Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

XP_038901811.1 heterogeneous nuclear ribonucleoprotein F isoform X1 [Benincasa hispida]1.5e-13695.26Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGT PGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKD AEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

TrEMBL top hitse value%identityAlignment
A0A0A0L205 RRM domain-containing protein5.0e-13896.05Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

A0A1S3BMM3 heterogeneous nuclear ribonucleoprotein F5.0e-13896.05Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

A0A5A7TH86 Heterogeneous nuclear ribonucleoprotein H isoform X15.0e-13896.05Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

A0A5D3BB71 Heterogeneous nuclear ribonucleoprotein H isoform X15.0e-13896.05Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYV+QPPPFPVVRLRGLPFDCMETDV EFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDI+DFFKG+ LSEDSIHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEF+N QDSKAAM KDRMTLGSRYIELFPSS +ELDEAISRGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

A0A6J1H2H4 heterogeneous nuclear ribonucleoprotein F-like2.8e-13694.07Show/hide
Query:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL
        S+ADGGDGREMGAKRQRIVDQGSSYYGTSPG+GFMYN SPYAYV QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDI+FVHKNGKFTGEGFCVLGYPL
Subjt:  SYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPL

Query:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN
        QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR+APRSKLNDEVKD AEHTG+LRLRGLPYSAGKDDI+DFFKG+ILSED IHLTLN
Subjt:  QVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLN

Query:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        SEGRPSGEAFVEFAN QDSKAAM KDRMTLGSRYIELFPSSQ+ELDEAI+RGR
Subjt:  SEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

SwissProt top hitse value%identityAlignment
P52597 Heterogeneous nuclear ribonucleoprotein F3.1e-2837.69Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+GK +  +G RYIE+F SSQ+E+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL

Q5E9J1 Heterogeneous nuclear ribonucleoprotein F5.9e-2736.68Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL
        S P S       D+A + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+GK +  +G RYIE+F SSQ+E+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL

Q60HC3 Heterogeneous nuclear ribonucleoprotein F3.1e-2837.69Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  LG    V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+GK +  +G RYIE+F SSQ+E+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL

Q794E4 Heterogeneous nuclear ribonucleoprotein F3.5e-2737.19Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+GK +  +G RYIE+F SSQ+E+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL

Q9Z2X1 Heterogeneous nuclear ribonucleoprotein F3.5e-2737.19Show/hide
Query:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR
        VV+LRGLP+ C   DV  F     I D    + F++ + G+ +GE F  L     V  AL+++R++MG RY+E+F+S+R E    +            + 
Subjt:  VVRLRGLPFDCMETDVAEFFHGLDIVD----ILFVH-KNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRR

Query:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL
        S P S       DSA + G +RLRGLP+   K++I+ FF G  +  + I L ++ EG+ +GEAFV+FA+ + ++ A+GK +  +G RYIE+F SSQ+E+
Subjt:  SAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDEL

Arabidopsis top hitse value%identityAlignment
AT3G20890.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.3e-10162.63Show/hide
Query:  YADGGDGREMGAKRQRIVDQG--SSYYGTSPGSGFMYNTSPYAYVS--QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLG
        Y DG DGREMG KRQR++DQG    +YG  P SGFMYN  PY +V+   PPPFP VRLRGLPFDC E DV EFFHGLD+VD+LFVH+N K TGE FCVLG
Subjt:  YADGGDGREMGAKRQRIVDQG--SSYYGTSPGSGFMYNTSPYAYVS--QPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLG

Query:  YPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDAR---------------------------------GGSPRRSAPRSKLNDEVKDSAEHT
        YPLQVDFALQ+NRQNMGRRYVE+FRS +QEYYKA+ANEV ++R                                 G SPRR   R++ +D+ K+  EHT
Subjt:  YPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDAR---------------------------------GGSPRRSAPRSKLNDEVKDSAEHT

Query:  GVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
        G+LRLRGLP+SAGK+DI+DFFK + LSED +H+T+N EGRP+GEAFVEF N +DS+AAM KDR TLGSRYIELFPSS +EL+EA+SRGR
Subjt:  GVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

AT5G66010.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-5947.06Show/hide
Query:  GGDGREMGAKRQRIVDQGSSY--YGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQV
        G  G E+G+KRQR++ Q + Y   GT P S       P+ Y      FPVVRLRGLPF+C + D+ EFF GL+IVD+L V KNGKF+GE F V   P+QV
Subjt:  GGDGREMGAKRQRIVDQGSSY--YGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFVHKNGKFTGEGFCVLGYPLQV

Query:  DFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLT
        + ALQR+R NMGRRYVE+FR ++Q+YY AVA E     ++ R   P     R+K   E K+  E+T VL++RGLPYS  K  I++FF GY + +  + + 
Subjt:  DFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSIHLT

Query:  LNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
           +G+ +GEAFVEF   ++++ AM KD+M++GSRY+ELFP++++E   A +R R
Subjt:  LNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR

AT5G66010.2 RNA-binding (RRM/RBD/RNP motifs) family protein6.1e-3544.94Show/hide
Query:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSI
        +QV+ ALQR+R NMGRRYVE+FR ++Q+YY AVA E     ++ R   P     R+K   E K+  E+T VL++RGLPYS  K  I++FF GY + +  +
Subjt:  LQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANE----VFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSEDSI

Query:  HLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR
         +    +G+ +GEAFVEF   ++++ AM KD+M++GSRY+ELFP++++E   A +R R
Subjt:  HLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAAAGCAATCTCTTCCTTCACTTCAATTTTTGCGGCTAACCTCTGGAGCAACCCTATATTGATTAAGCATGGTTTTTGTTCATATGCTGATGGTGGTGATGGTCG
TGAAATGGGTGCAAAGCGTCAACGGATAGTTGATCAGGGATCTTCTTATTATGGGACTTCTCCGGGTTCTGGGTTTATGTATAATACAAGTCCCTATGCATATGTTAGTC
AGCCACCACCATTTCCTGTTGTCAGGCTACGGGGTCTTCCTTTTGATTGCATGGAAACTGATGTTGCTGAGTTCTTTCATGGTCTGGACATAGTTGACATTCTTTTTGTC
CACAAGAATGGCAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTATCCTCTGCAGGTTGATTTTGCCCTTCAGAGGAATAGGCAAAACATGGGCAGGAGATATGTTGA
GATTTTCAGGAGCAATCGACAGGAATACTACAAGGCTGTAGCAAATGAAGTTTTCGATGCCCGGGGTGGTTCGCCGAGAAGAAGTGCACCGAGGTCAAAGTTAAACGATG
AAGTGAAAGACTCTGCTGAACACACTGGTGTATTACGCTTGAGGGGACTGCCATATTCAGCTGGCAAGGATGACATAATGGACTTCTTCAAAGGTTACATCTTATCAGAA
GACTCCATTCATTTAACACTGAATTCAGAGGGGAGGCCAAGTGGGGAAGCATTTGTTGAATTCGCAAATGTGCAGGACTCGAAAGCAGCCATGGGCAAGGATAGAATGAC
ACTAGGTAGTCGTTACATAGAGCTGTTCCCATCATCGCAGGATGAGCTAGACGAAGCGATCTCTCGAGGACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAAAGCAATCTCTTCCTTCACTTCAATTTTTGCGGCTAACCTCTGGAGCAACCCTATATTGATTAAGCATGGTTTTTGTTCATATGCTGATGGTGGTGATGGTCG
TGAAATGGGTGCAAAGCGTCAACGGATAGTTGATCAGGGATCTTCTTATTATGGGACTTCTCCGGGTTCTGGGTTTATGTATAATACAAGTCCCTATGCATATGTTAGTC
AGCCACCACCATTTCCTGTTGTCAGGCTACGGGGTCTTCCTTTTGATTGCATGGAAACTGATGTTGCTGAGTTCTTTCATGGTCTGGACATAGTTGACATTCTTTTTGTC
CACAAGAATGGCAAATTCACAGGGGAAGGTTTTTGTGTTTTGGGTTATCCTCTGCAGGTTGATTTTGCCCTTCAGAGGAATAGGCAAAACATGGGCAGGAGATATGTTGA
GATTTTCAGGAGCAATCGACAGGAATACTACAAGGCTGTAGCAAATGAAGTTTTCGATGCCCGGGGTGGTTCGCCGAGAAGAAGTGCACCGAGGTCAAAGTTAAACGATG
AAGTGAAAGACTCTGCTGAACACACTGGTGTATTACGCTTGAGGGGACTGCCATATTCAGCTGGCAAGGATGACATAATGGACTTCTTCAAAGGTTACATCTTATCAGAA
GACTCCATTCATTTAACACTGAATTCAGAGGGGAGGCCAAGTGGGGAAGCATTTGTTGAATTCGCAAATGTGCAGGACTCGAAAGCAGCCATGGGCAAGGATAGAATGAC
ACTAGGTAGTCGTTACATAGAGCTGTTCCCATCATCGCAGGATGAGCTAGACGAAGCGATCTCTCGAGGACGGTGA
Protein sequenceShow/hide protein sequence
MCKAISSFTSIFAANLWSNPILIKHGFCSYADGGDGREMGAKRQRIVDQGSSYYGTSPGSGFMYNTSPYAYVSQPPPFPVVRLRGLPFDCMETDVAEFFHGLDIVDILFV
HKNGKFTGEGFCVLGYPLQVDFALQRNRQNMGRRYVEIFRSNRQEYYKAVANEVFDARGGSPRRSAPRSKLNDEVKDSAEHTGVLRLRGLPYSAGKDDIMDFFKGYILSE
DSIHLTLNSEGRPSGEAFVEFANVQDSKAAMGKDRMTLGSRYIELFPSSQDELDEAISRGR