; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010331 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010331
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionpre-mRNA-splicing factor CWC22 homolog
Genome locationchr9:46433231..46436479
RNA-Seq ExpressionLag0010331
SyntenyLag0010331
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR003891 - Initiation factor eIF-4 gamma, MA3
IPR016021 - MIF4G-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588511.1 Pre-mRNA-splicing factor CWC22-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-10052.49Show/hide
Query:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVFA    VVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEESEDE+D  D G DD EDEDEE++SEEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------
        YGLLGQRFCKINKV+QENFEKC VQQYSMIHRLETN +R                                  RIF  +                     
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------

Query:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK
                                             RE+ +               +DEES +SDS         SESDSSSS++SEG++RRRGKKRRK
Subjt:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK

Query:  TGR
        TGR
Subjt:  TGR

KAG7022341.1 Pre-mRNA-splicing factor CWC22-like protein [Cucurbita argyrosperma subsp. argyrosperma]1.3e-10052.49Show/hide
Query:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVFA    VVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEESEDE+D  D G DD EDEDEE++SEEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------
        YGLLGQRFCKINKV+QENFEKC VQQYSMIHRLETN +R                                  RIF  +                     
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------

Query:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK
                                             RE+ +               +DEES +SDS         SESDSSSS++SEG++RRRGKKRRK
Subjt:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK

Query:  TGR
        TGR
Subjt:  TGR

TYJ96154.1 pre-mRNA-splicing factor CWC22-like protein isoform X2 [Cucumis melo var. makuwa]6.2e-10368.04Show/hide
Query:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVF    AVVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEESEDEED  D G DD EDEDEEDESEEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        YGLLGQRFCKINKVYQENFEKC VQQYSMIHRLETN +R +
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

XP_023511809.1 pre-mRNA-splicing factor CWC22 homolog isoform X1 [Cucurbita pepo subsp. pepo]7.6e-10167.06Show/hide
Query:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVF    AVVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY
        LGEESEDEED  D G  DEDE+EEDESEEEDE QM INDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRYY
Subjt:  LGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY

Query:  GLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        GLLGQRFCKINKV+QENFEKC VQQYSMIHRLETN +R +
Subjt:  GLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

XP_038900963.1 pre-mRNA-splicing factor CWC22 homolog [Benincasa hispida]1.1e-10267.74Show/hide
Query:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVF    AVVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEES+DEED  D G DD EDED+EDESEEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        YGLLGQRFCKINKVYQENFEKC VQQYSMIHRLETN +R +
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

TrEMBL top hitse value%identityAlignment
A0A1S3BNN3 pre-mRNA-splicing factor CWC22 homolog isoform X21.8e-10052.8Show/hide
Query:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVF    AVVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEESEDEED  D G DD EDEDEEDESEEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------
        YGLLGQRFCKINKVYQENFEKC VQQYSMIHRLETN +R                                  RIF  +                     
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------

Query:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDSSESDSSS------SKDSEGKERRRGKKRRKTGR
                                             RE+ +               +DEES++SDSS+SDSSS      S+D E K+RRR KKRRKT R
Subjt:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDSSESDSSS------SKDSEGKERRRGKKRRKTGR

A0A5D3BB30 Pre-mRNA-splicing factor CWC22-like protein isoform X23.0e-10368.04Show/hide
Query:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVF    AVVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISLQEEIDPEI LDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEESEDEED  D G DD EDEDEEDESEEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        YGLLGQRFCKINKVYQENFEKC VQQYSMIHRLETN +R +
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

A0A6J1D9T5 pre-mRNA-splicing factor CWC22 homolog6.3e-10165.59Show/hide
Query:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVF    AVVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVT+CGSI  
Subjt:  MASPGFTDVF----AVVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISL EEIDPEIALDIFK+D NFL+NEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY
        LGEESEDE+D   VG DDEDED+ED+SEE+DE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKI+LEPGQE+ELCVMLLECCSQERTYLRYY
Subjt:  LGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY

Query:  GLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        GLLGQRFCKINKVYQENFE+C VQQYSMIHRLETN +R +
Subjt:  GLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

A0A6J1EQK4 pre-mRNA-splicing factor CWC22 homolog1.1e-10052.49Show/hide
Query:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVFA    VVNTKFPE+                                  +N            LTVLLENPTD+S+EVAVGFVTECGSI  
Subjt:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEESEDEED  D G DD EDEDEE++SEEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------
        YGLLGQRFCKINKV+QENFEKC VQQYSMIHRLETN +R                                  RIF  +                     
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------

Query:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK
                                             RE+ +               +DEES +SDS         SESDSSSS++SEG++RRRGKKRRK
Subjt:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK

Query:  TGR
        TGR
Subjt:  TGR

A0A6J1I0I9 pre-mRNA-splicing factor CWC22 homolog1.4e-10052.29Show/hide
Query:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--
        MASPGFTDVFA    VVNTKFPE+                                  +N            LTVLLENPTDDS+EVAVGFVTECGSI  
Subjt:  MASPGFTDVFA----VVNTKFPEL---------------------------------TLN------------LTVLLENPTDDSIEVAVGFVTECGSI--

Query:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                             EI     FL++G        F GYP+VRPELDLVEQEDQLTHE+SLQEEIDPEIALDIFKSD NFLENEKRYEDLK NI
Subjt:  ------------------QYYEI-----FLLKG--------FMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY
        LGEESEDEED  D G DD EDEDEE+++EEEDE QMQINDETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELCVMLLECCSQERTYLRY
Subjt:  LGEESEDEEDPFDVGIDD-EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRY

Query:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------
        YGLLGQRFCKINKV+QENFEKC VQQYSMIHRLETN +R                                  RIF  +                     
Subjt:  YGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIR----------------------------------RIFCPL---------------------

Query:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK
                                             RE+ +               +DEES +SDS         SESDSSSS++SEG++RRRGKKRRK
Subjt:  ------------------------------------TREFARAFEEYATANHATPKTADEESRTSDS---------SESDSSSSKDSEGKERRRGKKRRK

Query:  TGR
        TGR
Subjt:  TGR

SwissProt top hitse value%identityAlignment
Q4PCY0 Pre-mRNA-splicing factor CWC224.4e-5142.7Show/hide
Query:  LTVLLENPTDDSIEVAVGFVTECGS-----------------------------IQYYEIFL----LKGFMGYPSVRPELDLVEQEDQLTHEISLQEEID
        L +LLE PTDDS+E+AVGF+ E G+                             +QY    L     +GF   P +   LDLVE++DQ+TH ISL ++++
Subjt:  LTVLLENPTDDSIEVAVGFVTECGS-----------------------------IQYYEIFL----LKGFMGYPSVRPELDLVEQEDQLTHEISLQEEID

Query:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDV------GIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAG
         E  L++FK D  F+ENE+RY  +K  ILGE S+ ++   +         DD  +DE  E  ++ + Q++I+D TETNL+NLRRTIYLTIMS +DFEE+ 
Subjt:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDV------GIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAG

Query:  HKLLKIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        HKLLK+++  GQ++ELC M++ECCSQERTY ++YG +G+RFCK+++ + + F +     Y  IHR ETN +R I
Subjt:  HKLLKIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

Q4WKB9 Pre-mRNA-splicing factor cwc227.5e-5143.09Show/hide
Query:  LTVLLENPTDDSIEVAVGFVTECGS-----------------------------IQYYEIFLLK----GFMGYPSVRPELDLVEQEDQLTHEISLQEEID
        L +LL  PTDDS+E+AVG   E G                              +QY    L +     +   P+++ ELDLVE+EDQ+TH I L +EID
Subjt:  LTVLLENPTDDSIEVAVGFVTECGS-----------------------------IQYYEIFLLK----GFMGYPSVRPELDLVEQEDQLTHEISLQEEID

Query:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKI
         +  L++FK D  + E+E+ Y+ LK  ILGE S+D+E       +DEDE +E   EEE+E QM+I D++ T+LVNLRRTIYLTIMS +DFEE  HKL+KI
Subjt:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKI

Query:  KLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRIFCPLTREFARAFEEYATANHATPKTADEESRT
         L PG E EL  M++ECCSQERTY ++YGL+G+RF KIN+++ + FE    + Y  IHR ETN +R I     R F       A   H        E  T
Subjt:  KLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRIFCPLTREFARAFEEYATANHATPKTADEESRT

Query:  SDSS
        + SS
Subjt:  SDSS

Q5RA93 Pre-mRNA-splicing factor CWC22 homolog3.0e-5244.44Show/hide
Query:  LTVLLENPTDDSIEVAVGFVTECG-----------------------------SIQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEID
        LT+LLE PTDDS+EVA+GF+ ECG                              +QY    +F ++  GF  +P +   LDLVE++DQ TH + L+++ +
Subjt:  LTVLLENPTDDSIEVAVGFVTECG-----------------------------SIQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEID

Query:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDE--LQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLL
        PE  L++FK D NF+ENE++Y+ +K  IL E   D     D G  +EDE+EE+E  EEDE   ++ I+D+TE NLV+ RRTIYL I S +DFEE  HKLL
Subjt:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDE--LQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLL

Query:  KIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        K++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+FE    +QY  IHRLETN +R +
Subjt:  KIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

Q8C5N3 Pre-mRNA-splicing factor CWC22 homolog1.7e-5042.8Show/hide
Query:  LTVLLENPTDDSIEVAVGFVTECG-----------------------------SIQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEID
        LT+LLE PTDDS+EVA+GF+ ECG                              +QY    +F ++  GF  +P +   LDLVE++DQ TH + L+++ +
Subjt:  LTVLLENPTDDSIEVAVGFVTECG-----------------------------SIQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEID

Query:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDE---LQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKL
        PE  L++FK D NF+ENE++Y+ +K  IL E   D       G  +++E+E++E E EDE    ++ I+D+TE NLV+ RRTIYL I S +DFEE  HKL
Subjt:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDE---LQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKL

Query:  LKIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        LK++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+FE    +QY  IHRLETN +R +
Subjt:  LKIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

Q9HCG8 Pre-mRNA-splicing factor CWC22 homolog3.0e-5244.44Show/hide
Query:  LTVLLENPTDDSIEVAVGFVTECG-----------------------------SIQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEID
        LT+LLE PTDDS+EVA+GF+ ECG                              +QY    +F ++  GF  +P +   LDLVE++DQ TH + L+++ +
Subjt:  LTVLLENPTDDSIEVAVGFVTECG-----------------------------SIQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEID

Query:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDE--LQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLL
        PE  L++FK D NF+ENE++Y+ +K  IL E   D     D G  +EDE+EE+E  EEDE   ++ I+D+TE NLV+ RRTIYL I S +DFEE  HKLL
Subjt:  PEIALDIFKSDSNFLENEKRYEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDE--LQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLL

Query:  KIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        K++    Q  ELC M+L+CC+Q+RTY +++GLL  RFC + K Y E+FE    +QY  IHRLETN +R +
Subjt:  KIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

Arabidopsis top hitse value%identityAlignment
AT1G52325.1 Initiation factor eIF-4 gamma, MA36.3e-1370.45Show/hide
Query:  MSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY
        MS +DFEEAGHKLLKI+LE GQ +ELCVM+LECC++E+TY  +Y
Subjt:  MSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY

AT1G80930.1 MIF4G domain-containing protein / MA3 domain-containing protein1.3e-8555.59Show/hide
Query:  MASPGFTDVF----AVVNTKFPE--------------------------------------------LTLNL-TVLLENPTDDSIEVAVGFVTECGS---
        MASPGFTDVF    AV+N KFPE                                            + L L T+LL +PTDDS+EVAVGFVTECG+   
Subjt:  MASPGFTDVF----AVVNTKFPE--------------------------------------------LTLNL-TVLLENPTDDSIEVAVGFVTECGS---

Query:  --------------------------IQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI
                                  +QY    +F  +   F G+P+VRPELDLV  E++ +H++SL  EIDPE ALDIFK D +F+ENEK+YE LK  +
Subjt:  --------------------------IQYY--EIFLLK--GFMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKRYEDLKNNI

Query:  LGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY
        LG+E  ++ED  D   +D DE EEDES+EEDE QM+I DETETNLVNLRRTIYLTIMS VDFEEAGHKLLKIKLEPGQE+ELC+MLLECCSQERTYLRYY
Subjt:  LGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYY

Query:  GLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI
        GLLGQRFC INK++QENFEKC VQQYSMIHRLETN +R +
Subjt:  GLLGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRI

AT5G17930.1 MIF4G domain-containing protein / MA3 domain-containing protein8.3e-0527.27Show/hide
Query:  EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENF
        ED  E  ++E  +  +M    E +    + R+ I+  IMS  D+ +A  KLL++ L   Q+ E+  +L+ECC QE+ + ++Y +L  + C+ +K ++   
Subjt:  EDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYYGLLGQRFCKINKVYQENF

Query:  EKCLVQQYSMIHRLETNNIRR
        + C+   +     LE+ +++R
Subjt:  EKCLVQQYSMIHRLETNNIRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTCCAGGGTTCACCGATGTATTTGCTGTAGTGAATACTAAGTTTCCCGAGTTAACCCTAAACCTCACTGTGTTGCTGGAGAATCCTACTGATGACAGCATTGA
GGTAGCTGTTGGTTTTGTGACTGAGTGTGGATCAATTCAATACTACGAGATCTTTCTCCTAAAGGGCTTCATGGGCTATCCATCTGTCCGTCCAGAACTGGACCTTGTAG
AGCAAGAAGATCAGTTAACTCATGAAATTTCTTTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGATATCTTCAAATCTGATTCAAATTTCCTAGAAAATGAGAAGCGT
TATGAGGATTTAAAGAACAATATACTCGGTGAGGAATCTGAGGACGAGGAAGACCCATTTGATGTTGGAATAGATGATGAAGACGAGGATGAGGAAGATGAATCTGAAGA
AGAAGATGAGCTGCAGATGCAAATAAATGATGAAACAGAGACCAATCTTGTGAACCTCAGAAGGACAATTTATTTGACAATTATGTCCGGTGTAGACTTTGAGGAGGCTG
GCCATAAGCTTCTAAAAATTAAACTTGAGCCTGGTCAAGAATTGGAGTTGTGCGTCATGTTGTTGGAATGTTGCAGTCAGGAGAGAACTTACCTCCGATATTATGGCCTG
TTGGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAGAATTTTGAGAAATGCCTTGTCCAACAATATTCAATGATTCACAGGCTTGAAACCAACAATATCAGGAG
AATTTTTTGCCCACTTACTCGAGAATTTGCGAGAGCATTTGAAGAATATGCCACGGCTAATCATGCAACACCAAAAACTGCCGATGAGGAATCTCGAACTTCTGATTCGT
CGGAATCAGATTCTTCAAGCTCTAAGGACAGTGAAGGCAAAGAAAGGAGACGTGGAAAAAAGAGGAGAAAAACAGGAAGGTTCTCTTCTGTCTCAATGTCTCAATCTTCA
TTAGCAAACGATAATGATATGTGGTTTTTTCTTGAGCGTAATGTAAAACATCTTTGCTTGAAAGCAAAAATGGAAGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTCCAGGGTTCACCGATGTATTTGCTGTAGTGAATACTAAGTTTCCCGAGTTAACCCTAAACCTCACTGTGTTGCTGGAGAATCCTACTGATGACAGCATTGA
GGTAGCTGTTGGTTTTGTGACTGAGTGTGGATCAATTCAATACTACGAGATCTTTCTCCTAAAGGGCTTCATGGGCTATCCATCTGTCCGTCCAGAACTGGACCTTGTAG
AGCAAGAAGATCAGTTAACTCATGAAATTTCTTTGCAAGAAGAGATAGATCCTGAGATTGCTCTTGATATCTTCAAATCTGATTCAAATTTCCTAGAAAATGAGAAGCGT
TATGAGGATTTAAAGAACAATATACTCGGTGAGGAATCTGAGGACGAGGAAGACCCATTTGATGTTGGAATAGATGATGAAGACGAGGATGAGGAAGATGAATCTGAAGA
AGAAGATGAGCTGCAGATGCAAATAAATGATGAAACAGAGACCAATCTTGTGAACCTCAGAAGGACAATTTATTTGACAATTATGTCCGGTGTAGACTTTGAGGAGGCTG
GCCATAAGCTTCTAAAAATTAAACTTGAGCCTGGTCAAGAATTGGAGTTGTGCGTCATGTTGTTGGAATGTTGCAGTCAGGAGAGAACTTACCTCCGATATTATGGCCTG
TTGGGGCAAAGATTTTGCAAGATCAACAAAGTGTATCAGGAGAATTTTGAGAAATGCCTTGTCCAACAATATTCAATGATTCACAGGCTTGAAACCAACAATATCAGGAG
AATTTTTTGCCCACTTACTCGAGAATTTGCGAGAGCATTTGAAGAATATGCCACGGCTAATCATGCAACACCAAAAACTGCCGATGAGGAATCTCGAACTTCTGATTCGT
CGGAATCAGATTCTTCAAGCTCTAAGGACAGTGAAGGCAAAGAAAGGAGACGTGGAAAAAAGAGGAGAAAAACAGGAAGGTTCTCTTCTGTCTCAATGTCTCAATCTTCA
TTAGCAAACGATAATGATATGTGGTTTTTTCTTGAGCGTAATGTAAAACATCTTTGCTTGAAAGCAAAAATGGAAGATGAGTGA
Protein sequenceShow/hide protein sequence
MASPGFTDVFAVVNTKFPELTLNLTVLLENPTDDSIEVAVGFVTECGSIQYYEIFLLKGFMGYPSVRPELDLVEQEDQLTHEISLQEEIDPEIALDIFKSDSNFLENEKR
YEDLKNNILGEESEDEEDPFDVGIDDEDEDEEDESEEEDELQMQINDETETNLVNLRRTIYLTIMSGVDFEEAGHKLLKIKLEPGQELELCVMLLECCSQERTYLRYYGL
LGQRFCKINKVYQENFEKCLVQQYSMIHRLETNNIRRIFCPLTREFARAFEEYATANHATPKTADEESRTSDSSESDSSSSKDSEGKERRRGKKRRKTGRFSSVSMSQSS
LANDNDMWFFLERNVKHLCLKAKMEDE