; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010377 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010377
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr9:46789490..46790447
RNA-Seq ExpressionLag0010377
SyntenyLag0010377
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO61345.1 reverse transcriptase [Corchorus capsularis]2.3e-2834.23Show/hide
Query:  TEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFF
        TE L + W+  +LT EEE L V +    V ++ A+ + CL+GKLL+ RP+  +V+R  + + W++  GL V  +G+NLF+F F+   ++ RV +  PW F
Subjt:  TEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFF

Query:  DKFLLV--------------LDVMTLWPNHRRCRL-----TKGALLGSS-------------------LRVRILIDITKPLRRGIKLNAEGPIGG-CWIP
        +K LLV              LD  + W       L     + G ++G S                   LR R  +++TKPLRRG+ L A  P GG   I 
Subjt:  DKFLLV--------------LDVMTLWPNHRRCRL-----TKGALLGSS-------------------LRVRILIDITKPLRRGIKLNAEGPIGG-CWIP

Query:  MQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEG
         +YEKLP +C  CG L H  N+C        DK K+++  +YGPWLR E    +S + +G
Subjt:  MQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEG

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]6.1e-4540.08Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP
        M    LLE WK   LT+EE+++AVDI S A+  +   +++ L+ KLL+ R I+  V++ TL IAW++D    +VD +G N+FLF+F++  DRNR+LR GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP

Query:  WFFDKFLLVLD--------------VMTLWPNHRRCRL------------------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L+++D               ++LW +     L                              GS LRVR+  D+ KPL RGIKLN +GP+GGCW
Subjt:  WFFDKFLLVLD--------------VMTLWPNHRRCRL------------------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQS
        IP+QYE+LP +  HCG+LDH   DCS         D V +  QYGPWLRF+G    S
Subjt:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQS

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]9.6e-5143.73Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPW
        M+ E LL  W+K  LT+EE+E+A+D+  +AV  +   +   LVGKLLA R I++DV+ R L +AW+V+  L V+ +GKNLFLF F +  D NRV++TGPW
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPW

Query:  FFDKFLLVL------------------------DVMTLWPNHRRC-RL-------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI
        FFDK L+VL                        D+   W N     RL              KG   G+SLR+R+LIDITKPLRRGIK+N +GP+GGCWI
Subjt:  FFDKFLLVL------------------------DVMTLWPNHRRC-RL-------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI

Query:  PMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEGMK
        P+QYE+LP +C  CG + H S+DC        D  +     +YGPWLRF GS  ++G  +G K
Subjt:  PMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEGMK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.7e-3938.43Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP
        M T  LLE WK   LT+EEEE A+D+ + A A + ++++  LVGKL   RPI   V++ T+  AW+++ +   V  LG NLFLFSF +  DRN++ ++GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP

Query:  WFFDKFLLVLD--------------VMTLWPNH---------RRCRLTKGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L++++               + +W            R   +  G  L               GS+LRVR+++DI+KPLRRGIKLN +GPIGG W
Subjt:  WFFDKFLLVLD--------------VMTLWPNH---------RRCRLTKGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVK
        IP+QYE+LP +C HCG               +S   K   + QYG WLR++G+VK
Subjt:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVK

XP_028117212.1 uncharacterized protein LOC114314884 [Camellia sinensis]1.0e-2836.4Show/hide
Query:  KLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVL--
        +L LT EEEE  V +    +  + A   +CLVGKLL  RP   D +R TL+  W+   G+     G NL L  F  + D+ RV+  GPW FDK L++L  
Subjt:  KLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVL--

Query:  ------------DVMTLWPNHRRCRLTK-----GALLGS-------------------SLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYC
                      M  W +     L       G LLG+                   +L +RI I+I KPLRRG+KL A G     WI +QYE+LP +C
Subjt:  ------------DVMTLWPNHRRCRLTK-----GALLGS-------------------SLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYC

Query:  AHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFE
         HCG L H  +DC       + +++V  R QYGPWLR E
Subjt:  AHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFE

TrEMBL top hitse value%identityAlignment
A0A1R3GTB5 Reverse transcriptase1.1e-2834.23Show/hide
Query:  TEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFF
        TE L + W+  +LT EEE L V +    V ++ A+ + CL+GKLL+ RP+  +V+R  + + W++  GL V  +G+NLF+F F+   ++ RV +  PW F
Subjt:  TEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFF

Query:  DKFLLV--------------LDVMTLWPNHRRCRL-----TKGALLGSS-------------------LRVRILIDITKPLRRGIKLNAEGPIGG-CWIP
        +K LLV              LD  + W       L     + G ++G S                   LR R  +++TKPLRRG+ L A  P GG   I 
Subjt:  DKFLLV--------------LDVMTLWPNHRRCRL-----TKGALLGSS-------------------LRVRILIDITKPLRRGIKLNAEGPIGG-CWIP

Query:  MQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEG
         +YEKLP +C  CG L H  N+C        DK K+++  +YGPWLR E    +S + +G
Subjt:  MQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEG

A0A2N9FJK9 CCHC-type domain-containing protein1.8e-2635.08Show/hide
Query:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFD
        ++L+E W++ SLT E+E     IA EA+ DS      CL+GKLL  +      ++ T+   W   SG+    +G+NLFLF F    D  RVL   PW FD
Subjt:  EKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFD

Query:  KFLLVLDVM--------------TLWPNHRRCRL------------------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQ
          LLVL+V                 W       L                          G   G  LRVRI +D+TKPL+RG +L   G  G  WI  +
Subjt:  KFLLVLDVM--------------TLWPNHRRCRL------------------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQ

Query:  YEKLPQYCAHCGKLDHGSNDCSLLT---APMSDKDKVVERFQYGPWLR
        YE+LP  C HCGKL HG  +C L       +S + K      YGPWLR
Subjt:  YEKLPQYCAHCGKLDHGSNDCSLLT---APMSDKDKVVERFQYGPWLR

A0A6J1BSZ1 uncharacterized protein LOC1110054812.9e-4540.08Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP
        M    LLE WK   LT+EE+++AVDI S A+  +   +++ L+ KLL+ R I+  V++ TL IAW++D    +VD +G N+FLF+F++  DRNR+LR GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP

Query:  WFFDKFLLVLD--------------VMTLWPNHRRCRL------------------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L+++D               ++LW +     L                              GS LRVR+  D+ KPL RGIKLN +GP+GGCW
Subjt:  WFFDKFLLVLD--------------VMTLWPNHRRCRL------------------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQS
        IP+QYE+LP +  HCG+LDH   DCS         D V +  QYGPWLRF+G    S
Subjt:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQS

A0A6J1DU55 uncharacterized protein LOC1110231354.7e-5143.73Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPW
        M+ E LL  W+K  LT+EE+E+A+D+  +AV  +   +   LVGKLLA R I++DV+ R L +AW+V+  L V+ +GKNLFLF F +  D NRV++TGPW
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPW

Query:  FFDKFLLVL------------------------DVMTLWPNHRRC-RL-------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI
        FFDK L+VL                        D+   W N     RL              KG   G+SLR+R+LIDITKPLRRGIK+N +GP+GGCWI
Subjt:  FFDKFLLVL------------------------DVMTLWPNHRRC-RL-------------TKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWI

Query:  PMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEGMK
        P+QYE+LP +C  CG + H S+DC        D  +     +YGPWLRF GS  ++G  +G K
Subjt:  PMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQTEGMK

A0A6J1DX30 uncharacterized protein LOC1110248748.3e-4038.43Show/hide
Query:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP
        M T  LLE WK   LT+EEEE A+D+ + A A + ++++  LVGKL   RPI   V++ T+  AW+++ +   V  LG NLFLFSF +  DRN++ ++GP
Subjt:  METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVD-SGLAVDRLGKNLFLFSFDKVHDRNRVLRTGP

Query:  WFFDKFLLVLD--------------VMTLWPNH---------RRCRLTKGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW
        W FD+ L++++               + +W            R   +  G  L               GS+LRVR+++DI+KPLRRGIKLN +GPIGG W
Subjt:  WFFDKFLLVLD--------------VMTLWPNH---------RRCRLTKGALL---------------GSSLRVRILIDITKPLRRGIKLNAEGPIGGCW

Query:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVK
        IP+QYE+LP +C HCG               +S   K   + QYG WLR++G+VK
Subjt:  IPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48095.1 unknown protein1.9e-0428.07Show/hide
Query:  LRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGS---VKQSGQTEGMKQVVA
        +RV+I +  T  LR   ++  E    G  I  +YEKL + C +C ++ H  N+C  L AP+   D+ VE      W     S     Q+  T      ++
Subjt:  LRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGS---VKQSGQTEGMKQVVA

Query:  TAGM-TQPVPEVGM
        +A + +QP+P   +
Subjt:  TAGM-TQPVPEVGM

AT3G42140.1 zinc ion binding;nucleic acid binding7.2e-0423.91Show/hide
Query:  SLTAEEEELAVDIASEAVADSTAKMDICLVGKLLA------PRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLL
        +L  + +E+A+ +  EA+       D  L    LA      P+ +  +V+ R L I               +   F F        +LR GPW F+ ++ 
Subjt:  SLTAEEEELAVDIASEAVADSTAKMDICLVGKLLA------PRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLL

Query:  VLDVMTLWPNHRRCRLTKG--ALLGSSLR---VRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDC
        V+   T   +    +       + G  LR    RI+  I +  R G+ L          +  QYEKL  +C  CG L H +++C
Subjt:  VLDVMTLWPNHRRCRLTKG--ALLGSSLR---VRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAGAGAAGCTGCTTGAGGGTTGGAAAAAGTTGTCGTTAACTGCTGAGGAGGAGGAGTTGGCGGTGGATATTGCTTCGGAGGCGGTGGCGGATTCTACTGCTAA
AATGGATATCTGTCTGGTGGGTAAGCTTCTGGCGCCGCGTCCAATTGCCAGTGACGTCATTCGCCGGACGCTTTCAATTGCATGGCGTGTCGATTCCGGCCTGGCGGTGG
ATCGGTTGGGTAAGAATCTTTTTCTGTTTTCTTTTGACAAGGTTCATGATCGAAACAGGGTTCTTCGAACTGGTCCGTGGTTTTTTGACAAATTTTTGTTGGTGCTGGAT
GTGATGACGCTATGGCCAAACCATCGGAGATGCCGTTTAACAAAAGGGGCTTTGTTGGGGTCTAGTCTACGGGTGCGCATTTTGATTGACATTACTAAACCACTTCGCCG
TGGAATAAAGCTGAATGCCGAAGGGCCAATCGGCGGTTGTTGGATTCCTATGCAGTATGAGAAGTTGCCCCAGTACTGTGCTCATTGTGGAAAACTGGATCACGGTTCGA
ATGATTGTTCCTTGTTGACGGCTCCGATGAGTGATAAGGATAAGGTTGTGGAACGCTTCCAGTATGGACCGTGGCTTCGGTTTGAGGGGTCTGTGAAACAGTCCGGTCAG
ACGGAGGGGATGAAACAGGTCGTGGCGACGGCGGGGATGACACAACCTGTGCCGGAGGTAGGGATGAAGCATCCCTTGTCGGCGGCTGATGAGCCGGTACCGGCGGAAAA
GGCCGGGACGGTGCGGGAGCCGGTGGGTGTTGTTCCGGAGAAAACGGAGGTGGGTGCGAAATTTGGGGATGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAGAGAAGCTGCTTGAGGGTTGGAAAAAGTTGTCGTTAACTGCTGAGGAGGAGGAGTTGGCGGTGGATATTGCTTCGGAGGCGGTGGCGGATTCTACTGCTAA
AATGGATATCTGTCTGGTGGGTAAGCTTCTGGCGCCGCGTCCAATTGCCAGTGACGTCATTCGCCGGACGCTTTCAATTGCATGGCGTGTCGATTCCGGCCTGGCGGTGG
ATCGGTTGGGTAAGAATCTTTTTCTGTTTTCTTTTGACAAGGTTCATGATCGAAACAGGGTTCTTCGAACTGGTCCGTGGTTTTTTGACAAATTTTTGTTGGTGCTGGAT
GTGATGACGCTATGGCCAAACCATCGGAGATGCCGTTTAACAAAAGGGGCTTTGTTGGGGTCTAGTCTACGGGTGCGCATTTTGATTGACATTACTAAACCACTTCGCCG
TGGAATAAAGCTGAATGCCGAAGGGCCAATCGGCGGTTGTTGGATTCCTATGCAGTATGAGAAGTTGCCCCAGTACTGTGCTCATTGTGGAAAACTGGATCACGGTTCGA
ATGATTGTTCCTTGTTGACGGCTCCGATGAGTGATAAGGATAAGGTTGTGGAACGCTTCCAGTATGGACCGTGGCTTCGGTTTGAGGGGTCTGTGAAACAGTCCGGTCAG
ACGGAGGGGATGAAACAGGTCGTGGCGACGGCGGGGATGACACAACCTGTGCCGGAGGTAGGGATGAAGCATCCCTTGTCGGCGGCTGATGAGCCGGTACCGGCGGAAAA
GGCCGGGACGGTGCGGGAGCCGGTGGGTGTTGTTCCGGAGAAAACGGAGGTGGGTGCGAAATTTGGGGATGGATAA
Protein sequenceShow/hide protein sequence
METEKLLEGWKKLSLTAEEEELAVDIASEAVADSTAKMDICLVGKLLAPRPIASDVIRRTLSIAWRVDSGLAVDRLGKNLFLFSFDKVHDRNRVLRTGPWFFDKFLLVLD
VMTLWPNHRRCRLTKGALLGSSLRVRILIDITKPLRRGIKLNAEGPIGGCWIPMQYEKLPQYCAHCGKLDHGSNDCSLLTAPMSDKDKVVERFQYGPWLRFEGSVKQSGQ
TEGMKQVVATAGMTQPVPEVGMKHPLSAADEPVPAEKAGTVREPVGVVPEKTEVGAKFGDG