CuGenDBv2

Gene ID	Lag0010409
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Chlororespiratory reduction 42
Genome location	chr9:47033314..47035618
RNA-Seq Expression	Lag0010409
Synteny	Lag0010409
Gene Ontology terms	NA
InterPro domains	IPR004000 - Actin family IPR004001 - Actin, conserved site IPR021495 - Protein of unknown function DUF3148 IPR043129 - ATPase, nucleotide binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022153826.1 uncharacterized protein LOC111021250 [Momordica charantia]

4.8e-49

86.05

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Query:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRS-LVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR
        MAASLS ATAI RPSISIINSIS FN SN LST  QPRS ++KCESSASAADETPPAKSRKLEIGSPVIV+EAP+MIKTAASVPCLRVNSGIINPGDVGR
Subjt:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRS-LVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR

Query:  IVSRKPKDLWAVRLKVGTYLIDGSSVAVS
        IVSRKPKD+WAVRLKVGTYLIDG  +++S
Subjt:  IVSRKPKDLWAVRLKVGTYLIDGSSVAVS

XP_022944245.1 uncharacterized protein LOC111448751 [Cucurbita moschata]

2.0e-47

87.9

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Query:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG
        MA SLS ATAI RPS  I I++SIS FNVSNSLSTRSQPRSLVKCESSASAAD TPPAKS KLEIGSPVIV+EAP+MIKTAASVPCLRVNSGIINPGDVG
Subjt:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG

Query:  RIVSRKPKDLWAVRLKVGTYLIDG
        RIVSRKPKD+W VRLKVGTYLIDG
Subjt:  RIVSRKPKDLWAVRLKVGTYLIDG

XP_022985824.1 uncharacterized protein LOC111483753 [Cucurbita maxima]

2.4e-48

87.9

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Query:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG
        MA SLS ATAI RPS  I I+NSIS FN+SNSLSTRSQPRS VKCESSASAAD TPPAKSRKLEIGSPVIV+EAP+MIKTAASVPCLRVNSGIINPGDVG
Subjt:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG

Query:  RIVSRKPKDLWAVRLKVGTYLIDG
        RIVSRKPKD+W VRLKVGTYLIDG
Subjt:  RIVSRKPKDLWAVRLKVGTYLIDG

XP_023513105.1 uncharacterized protein LOC111777646 [Cucurbita pepo subsp. pepo]

2.4e-48

88.71

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Query:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG
        MA SLS ATAI RPS  I I++SIS FNVSNSLSTRSQPRSLVKCESSASAAD TPPAKSRKLEIGSPVIV+EAP+MIKTAASVPCLRVNSGIINPGDVG
Subjt:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG

Query:  RIVSRKPKDLWAVRLKVGTYLIDG
        RIVSRKPKD+W VRLKVGTYLIDG
Subjt:  RIVSRKPKDLWAVRLKVGTYLIDG

XP_038900819.1 uncharacterized protein LOC120087887 [Benincasa hispida]

1.1e-48

88.52

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Query:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGRI
        MAASLSPATAI RPSI+I++SIS  NVS+SLS RSQPR LVKCESSASAAD+TPP  SRKLEIGSPVIVIEAP+MIKTAASVPCLRVNSGIINPGDVGRI
Subjt:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGRI

Query:  VSRKPKDLWAVRLKVGTYLIDG
        VSRKPKD+WAVRLKVGTYLIDG
Subjt:  VSRKPKDLWAVRLKVGTYLIDG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BMX2 uncharacterized protein LOC103491596

9.8e-48

86.99

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Query:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRSLVKCESSASAAD-ETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR
        MAAS SP T I RPSI  + SIS FNVSN+LSTRSQPRS+VKCESSASAAD +TPPAKS+KLEIGSPVIVIEAP+MIKTAASVPCLRVNSGIINPGDVGR
Subjt:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRSLVKCESSASAAD-ETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR

Query:  IVSRKPKDLWAVRLKVGTYLIDG
        IVSRKPKD+WAVRLKVGTYLIDG
Subjt:  IVSRKPKDLWAVRLKVGTYLIDG

A0A5A7T9E1 Chlororespiratory reduction 42

9.8e-48

86.99

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Query:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRSLVKCESSASAAD-ETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR
        MAAS SP T I RPSI  + SIS FNVSN+LSTRSQPRS+VKCESSASAAD +TPPAKS+KLEIGSPVIVIEAP+MIKTAASVPCLRVNSGIINPGDVGR
Subjt:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRSLVKCESSASAAD-ETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR

Query:  IVSRKPKDLWAVRLKVGTYLIDG
        IVSRKPKD+WAVRLKVGTYLIDG
Subjt:  IVSRKPKDLWAVRLKVGTYLIDG

A0A6J1DLV6 uncharacterized protein LOC111021250

2.3e-49

86.05

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Query:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRS-LVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR
        MAASLS ATAI RPSISIINSIS FN SN LST  QPRS ++KCESSASAADETPPAKSRKLEIGSPVIV+EAP+MIKTAASVPCLRVNSGIINPGDVGR
Subjt:  MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRS-LVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGR

Query:  IVSRKPKDLWAVRLKVGTYLIDGSSVAVS
        IVSRKPKD+WAVRLKVGTYLIDG  +++S
Subjt:  IVSRKPKDLWAVRLKVGTYLIDGSSVAVS

A0A6J1FYJ7 uncharacterized protein LOC111448751

9.8e-48

87.9

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Query:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG
        MA SLS ATAI RPS  I I++SIS FNVSNSLSTRSQPRSLVKCESSASAAD TPPAKS KLEIGSPVIV+EAP+MIKTAASVPCLRVNSGIINPGDVG
Subjt:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG

Query:  RIVSRKPKDLWAVRLKVGTYLIDG
        RIVSRKPKD+W VRLKVGTYLIDG
Subjt:  RIVSRKPKDLWAVRLKVGTYLIDG

A0A6J1JEC4 uncharacterized protein LOC111483753

1.2e-48

87.9

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Query:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG
        MA SLS ATAI RPS  I I+NSIS FN+SNSLSTRSQPRS VKCESSASAAD TPPAKSRKLEIGSPVIV+EAP+MIKTAASVPCLRVNSGIINPGDVG
Subjt:  MAASLSPATAILRPS--ISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVG

Query:  RIVSRKPKDLWAVRLKVGTYLIDG
        RIVSRKPKD+W VRLKVGTYLIDG
Subjt:  RIVSRKPKDLWAVRLKVGTYLIDG

SwissProt top hits

e value

%identity

Alignment

A2XLF2 Actin-1

3.1e-06

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

P0CJ46 Actin-1

3.1e-06

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

P30171 Actin-97

3.1e-06

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

P53496 Actin-11

3.1e-06

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

P53497 Actin-12

3.1e-06

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

Arabidopsis top hits

e value

%identity

Alignment

AT2G37620.1 actin 1

2.2e-07

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

AT2G37620.2 actin 1

2.2e-07

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

AT3G12110.1 actin-11

2.2e-07

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

AT3G46520.1 actin-12

2.2e-07

60.53

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Query:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF
        +W  G  ++ +  +  +MWIAKAEYDESGPSIVHRKCF
Subjt:  LWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

AT5G20935.1 unknown protein

2.7e-26

65.88

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Query:  RSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDLWAVRLKVGTYLIDG
        R  V+C      A+E P  KS KL++GSP+I++EAP++IKTAAS+PCLR NSG++ PGDVGRIVSRKPKDLWAVRL +GTYL+DG
Subjt:  RSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDLWAVRLKVGTYLIDG

Sequences

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CDS sequence

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ATGGCAGCTTCTCTTTCTCCCGCCACAGCAATTCTACGCCCAAGCATCAGCATCATCAATTCGATATCTCCATTTAACGTCTCGAACAGCTTAAGCACTCGCTCACAGCC
GCGAAGCCTCGTGAAGTGCGAATCAAGTGCATCGGCAGCCGACGAGACGCCGCCGGCGAAGAGTCGGAAACTCGAGATCGGCTCTCCCGTAATCGTAATCGAGGCTCCCA
GAATGATAAAGACCGCAGCCTCGGTTCCATGCCTCAGGGTCAATTCCGGCATAATCAATCCCGGCGACGTTGGCAGAATCGTGTCGAGAAAGCCGAAGGACTTGTGGGCC
GTGCGGCTTAAAGTCGGGACTTACTTAATCGATGGAAGTTCTGTTGCCGTATCCTTCGTCCACTACCTCCCAGGTTCTCTAATATTGCTTCGCTCTTTATTCATTTACCA
GTCCACGCCATGTATAATTCGCGCTTGGGGTTTTTTATGGTGCTCTGGTATTGGGGTTGTAGAAAATACAGTGTCTGGATTGGAGATGTGGATTGCAAAGGCAGAGTATG
ATGAATCTGGGCCATCAATTGTGCACAGGAAATGCTTCTAA

mRNA sequence

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Protein sequence

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MAASLSPATAILRPSISIINSISPFNVSNSLSTRSQPRSLVKCESSASAADETPPAKSRKLEIGSPVIVIEAPRMIKTAASVPCLRVNSGIINPGDVGRIVSRKPKDLWA
VRLKVGTYLIDGSSVAVSFVHYLPGSLILLRSLFIYQSTPCIIRAWGFLWCSGIGVVENTVSGLEMWIAKAEYDESGPSIVHRKCF

Lag0010409 (gene) of Sponge gourd (AG-4) v1 genome