; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010430 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010430
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr9:47205605..47206458
RNA-Seq ExpressionLag0010430
SyntenyLag0010430
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR041577 - Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KFK23310.1 hypothetical protein AALP_AAs43195U000200 [Arabis alpina]7.1e-6952.88Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL-----------------
        DDILVYSRSL DH  HL+ VL+VL++ QL AN+ KC F  ++IEYLGHI+ G GV+A+P K+ AM  WP P+N+K LRGFLGL                 
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL-----------------

Query:  --------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                      +A+ AFQ LK+AM T+PVL L+DFS  F +E+DAS +G+G VLMQ   PIAY+S AL      K++YERELMAIV AIQ+WR YLL
Subjt:  --------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSK-----------VPSAIEFAAVT
        GR+FLV  DQ SLKF+LEQ  V  EYQ+WLTKI+G++FDIVYK G+ENK A+ALS+           VP+AI+   +T
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSK-----------VPSAIEFAAVT

KFK24528.1 hypothetical protein AALP_AAs46225U000100, partial [Arabis alpina]2.3e-6751.87Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------
        DDILVYS+SL +H  HL +VL +L++HQL ANK KC F   ++EYLGH+V G GV+A+P K+ AM  WP P+N+K LRGFLGL+                
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------

Query:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                       AT AFQ LK+AM T+PVL L+DF+ +F +E+DAS  G+G VLMQ   P+AYFS AL      K++YERELMAIV AIQKWR YLL
Subjt:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTL
        GR+F+V  DQ SLKF+LEQ  +  EYQKWLTK++G++F+I YK G+ENK A+ALS+   A++  A+++
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTL

KFK28310.1 hypothetical protein AALP_AA8G499800 [Arabis alpina]1.3e-6752.14Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------
        DDILVYS SL +H  HL+VVL +L + QL ANK KC F    IEYLGH++ G GVSA+PSKL AM  WP+P+N+K LRGFLGL+                
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------

Query:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                       AT AF+ LK AM T+PVL L+DFS  F +E+DAS +G+G VL+Q   P+AYFS AL      K++YERELMAIV AIQKWR YLL
Subjt:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ
        GR+FLV  DQ SLKF+LEQ  V  EYQ+WLTKI+G+NFDI YK G+ENK A+ALS+V    +  A+++   +    I+++
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ

KFK41015.1 hypothetical protein AALP_AA2G074100 [Arabis alpina]1.5e-6650Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------
        DDILVYS+SL +H  HL  VLA+L+KHQL AN+ KC+F   ++EYLGH+V G GV+A+P K+ AM  W  P+N+K LRGFLGL+                
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------

Query:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                       AT AFQ LK+AM T+PVL L+DF+ +F +E+DAS  G+G VLMQ   P+AYFS AL      K++YERELMAIV AIQKWR YLL
Subjt:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ
        GR+F+V  DQ SLKF+LEQ  +  EYQKWLTK++G++F+I YK G+ENK A+ALS+   A+   A+++   +    I+ +
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ

XP_010541181.1 PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana]1.5e-6653.88Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------
        DDILVYS SL DH  HLQ VLAVL+KH+L ANK KC F  +QI+YLGHI+   GVS +P+K AAM++WP P N+KELRGFLGL+                
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------

Query:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                       A+ AF+ LK+AM + PVL L DF  +F +E DAS  G+G VLMQ   PIA+FS AL+     K +YERELMA+V++IQ+WR YLL
Subjt:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVP
        GR FLV  DQ +LKF+LEQ  V+ EYQ+WLTK++GY+F IVY+ GVENK A+ LS++P
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVP

TrEMBL top hitse value%identityAlignment
A0A087G0A8 Uncharacterized protein3.4e-6952.88Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL-----------------
        DDILVYSRSL DH  HL+ VL+VL++ QL AN+ KC F  ++IEYLGHI+ G GV+A+P K+ AM  WP P+N+K LRGFLGL                 
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL-----------------

Query:  --------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                      +A+ AFQ LK+AM T+PVL L+DFS  F +E+DAS +G+G VLMQ   PIAY+S AL      K++YERELMAIV AIQ+WR YLL
Subjt:  --------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSK-----------VPSAIEFAAVT
        GR+FLV  DQ SLKF+LEQ  V  EYQ+WLTKI+G++FDIVYK G+ENK A+ALS+           VP+AI+   +T
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSK-----------VPSAIEFAAVT

A0A087G3S6 Uncharacterized protein (Fragment)1.1e-6751.87Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------
        DDILVYS+SL +H  HL +VL +L++HQL ANK KC F   ++EYLGH+V G GV+A+P K+ AM  WP P+N+K LRGFLGL+                
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------

Query:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                       AT AFQ LK+AM T+PVL L+DF+ +F +E+DAS  G+G VLMQ   P+AYFS AL      K++YERELMAIV AIQKWR YLL
Subjt:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTL
        GR+F+V  DQ SLKF+LEQ  +  EYQKWLTK++G++F+I YK G+ENK A+ALS+   A++  A+++
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTL

A0A087GEK8 Uncharacterized protein6.5e-6852.14Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------
        DDILVYS SL +H  HL+VVL +L + QL ANK KC F    IEYLGH++ G GVSA+PSKL AM  WP+P+N+K LRGFLGL+                
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------

Query:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                       AT AF+ LK AM T+PVL L+DFS  F +E+DAS +G+G VL+Q   P+AYFS AL      K++YERELMAIV AIQKWR YLL
Subjt:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ
        GR+FLV  DQ SLKF+LEQ  V  EYQ+WLTKI+G+NFDI YK G+ENK A+ALS+V    +  A+++   +    I+++
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ

A0A087HFW3 Uncharacterized protein7.1e-6750Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------
        DDILVYS+SL +H  HL  VLA+L+KHQL AN+ KC+F   ++EYLGH+V G GV+A+P K+ AM  W  P+N+K LRGFLGL+                
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS----------------

Query:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                       AT AFQ LK+AM T+PVL L+DF+ +F +E+DAS  G+G VLMQ   P+AYFS AL      K++YERELMAIV AIQKWR YLL
Subjt:  ---------------ATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ
        GR+F+V  DQ SLKF+LEQ  +  EYQKWLTK++G++F+I YK G+ENK A+ALS+   A+   A+++   +    I+ +
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQ

A0A2I0X7V3 Putative mitochondrial protein4.6e-6648.58Show/hide
Query:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL-----------------
        DDILVYS+++ +H  HL+VVL VL++HQL AN  KC+F+   +EYLGH+V   GV+A+ +K+ AM++WP+PRNL+ELRGFLGL                 
Subjt:  DDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL-----------------

Query:  --------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL
                      +AT AF+ LK AM T+PVL L +F + F +E DAS  G+G VLMQ   P+AYFS  L+     K++YERELMAIV+AIQKWRPYLL
Subjt:  --------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLL

Query:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQQV
        GR F+V  DQ SLK++LEQ +VT E+Q+WL+K++GY+F+I YK G+ENK A+ALS+    I+   V++   ++ G I ++ +
Subjt:  GRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIEFAAVTLVGGLNRGLIHDQQV

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.61.8e-3533.46Show/hide
Query:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLSA--------------
        +DDI+V+S SL +H+  L +V   L K  L    +KC F  ++  +LGH++   G+  NP K+ A++++P+P   KE++ FLGL+               
Subjt:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLSA--------------

Query:  -------------------TDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRP
                             AF+ LK  +   P+L++ DF+++F +  DAS V +G VL Q GHP++Y S  L    IN +  E+EL+AIV A + +R 
Subjt:  -------------------TDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRP

Query:  YLLGRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKV
        YLLGR F +  D   L ++        +  +W  K+  ++FDI Y  G EN VA+ALS++
Subjt:  YLLGRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKV

P0CT34 Transposon Tf2-1 polyprotein9.7e-2928.94Show/hide
Query:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL----------------
        MDDIL++S+S  +HV H++ VL  LK   L+ N+ KC F   Q++++G+ +   G +     +  + +W  P+N KELR FLG                 
Subjt:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL----------------

Query:  ----------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYG-----HPIAYFSNALAPLHINKALYERELMAIVMAIQ
                        + T A + +K+ +++ PVLR  DFS++  +E DAS V VG VL Q       +P+ Y+S  ++   +N ++ ++E++AI+ +++
Subjt:  ----------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYG-----HPIAYFSNALAPLHINKALYERELMAIVMAIQ

Query:  KWRPYLLGR----RFLVDQSSL--KFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIE
         WR YL       + L D  +L  +   E         +W   +  +NF+I Y+ G  N +A+ALS++    E
Subjt:  KWRPYLLGR----RFLVDQSSL--KFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIE

P0CT35 Transposon Tf2-2 polyprotein9.7e-2928.94Show/hide
Query:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL----------------
        MDDIL++S+S  +HV H++ VL  LK   L+ N+ KC F   Q++++G+ +   G +     +  + +W  P+N KELR FLG                 
Subjt:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL----------------

Query:  ----------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYG-----HPIAYFSNALAPLHINKALYERELMAIVMAIQ
                        + T A + +K+ +++ PVLR  DFS++  +E DAS V VG VL Q       +P+ Y+S  ++   +N ++ ++E++AI+ +++
Subjt:  ----------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYG-----HPIAYFSNALAPLHINKALYERELMAIVMAIQ

Query:  KWRPYLLGR----RFLVDQSSL--KFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIE
         WR YL       + L D  +L  +   E         +W   +  +NF+I Y+ G  N +A+ALS++    E
Subjt:  KWRPYLLGR----RFLVDQSSL--KFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIE

P0CT41 Transposon Tf2-12 polyprotein9.7e-2928.94Show/hide
Query:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL----------------
        MDDIL++S+S  +HV H++ VL  LK   L+ N+ KC F   Q++++G+ +   G +     +  + +W  P+N KELR FLG                 
Subjt:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGL----------------

Query:  ----------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYG-----HPIAYFSNALAPLHINKALYERELMAIVMAIQ
                        + T A + +K+ +++ PVLR  DFS++  +E DAS V VG VL Q       +P+ Y+S  ++   +N ++ ++E++AI+ +++
Subjt:  ----------------SATDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYG-----HPIAYFSNALAPLHINKALYERELMAIVMAIQ

Query:  KWRPYLLGR----RFLVDQSSL--KFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIE
         WR YL       + L D  +L  +   E         +W   +  +NF+I Y+ G  N +A+ALS++    E
Subjt:  KWRPYLLGR----RFLVDQSSL--KFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKVPSAIE

P20825 Retrovirus-related Pol polyprotein from transposon 2972.8e-3633.46Show/hide
Query:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLSA--------------
        +DDI+++S SL +H+  +Q+V   L    L    +KC F  ++  +LGHIV   G+  NP K+ A+  +P+P   KE+R FLGL+               
Subjt:  MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLSA--------------

Query:  -------------------TDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRP
                            +AF+ LK  ++  P+L+L DF ++F +  DAS++ +G VL Q GHPI++ S  L    +N +  E+EL+AIV A + +R 
Subjt:  -------------------TDAFQLLKRAMMTIPVLRLLDFSREFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRP

Query:  YLLGRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKV
        YLLGR+FL+  D   L+++        + ++W  ++  Y F I Y  G EN VA+ALS++
Subjt:  YLLGRRFLV--DQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVANALSKV

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein3.0e-1740.46Show/hide
Query:  VGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLG--HIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS---------------------------
        + HL +VL + ++HQ  AN+ KC F   QI YLG  HI+ G GVSA+P+KL AM  WP P+N  ELRGFLGL+                           
Subjt:  VGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLG--HIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLS---------------------------

Query:  ----ATDAFQLLKRAMMTIPVLRLLDFSREF
            A  AF+ LK A+ T+PVL L D    F
Subjt:  ----ATDAFQLLKRAMMTIPVLRLLDFSREF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATATCCTTGTGTATAGTCGGTCGTTGATGGATCATGTGGGACATCTTCAAGTGGTGTTGGCTGTTTTGAAAAAGCATCAGTTGGTGGCTAATAAGAATAAATG
TAATTTTTCTCTTAGGCAAATAGAGTACCTTGGCCATATTGTTTATGGGGTGGGTGTGTCTGCTAATCCTTCTAAACTTGCTGCTATGGAACGATGGCCTGTTCCTCGGA
ATTTGAAAGAATTACGAGGATTCTTGGGACTATCTGCTACGGATGCTTTTCAGCTTTTGAAGAGGGCCATGATGACCATACCAGTCCTCCGATTGCTTGACTTTTCGAGG
GAATTTTTCATTGAAGCAGATGCTTCTAGTGTAGGTGTTGGGGTCGTGCTTATGCAATATGGCCATCCCATTGCCTATTTTAGCAATGCTTTAGCCCCTCTGCACATAAA
TAAGGCTCTATATGAGAGAGAACTTATGGCCATTGTCATGGCAATCCAAAAGTGGCGACCATATTTGTTGGGAAGAAGATTTTTGGTTGATCAGAGTAGTCTCAAGTTTA
TTCTTGAGCAACTCCTAGTCACTGGGGAATATCAGAAGTGGTTGACAAAGATAATGGGTTATAACTTTGATATAGTTTACAAACTAGGCGTGGAGAATAAGGTAGCTAAT
GCCTTGTCAAAGGTCCCGAGTGCTATTGAATTTGCAGCAGTAACTCTTGTTGGGGGATTGAATAGAGGACTTATTCATGATCAACAAGTTCATGAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATATCCTTGTGTATAGTCGGTCGTTGATGGATCATGTGGGACATCTTCAAGTGGTGTTGGCTGTTTTGAAAAAGCATCAGTTGGTGGCTAATAAGAATAAATG
TAATTTTTCTCTTAGGCAAATAGAGTACCTTGGCCATATTGTTTATGGGGTGGGTGTGTCTGCTAATCCTTCTAAACTTGCTGCTATGGAACGATGGCCTGTTCCTCGGA
ATTTGAAAGAATTACGAGGATTCTTGGGACTATCTGCTACGGATGCTTTTCAGCTTTTGAAGAGGGCCATGATGACCATACCAGTCCTCCGATTGCTTGACTTTTCGAGG
GAATTTTTCATTGAAGCAGATGCTTCTAGTGTAGGTGTTGGGGTCGTGCTTATGCAATATGGCCATCCCATTGCCTATTTTAGCAATGCTTTAGCCCCTCTGCACATAAA
TAAGGCTCTATATGAGAGAGAACTTATGGCCATTGTCATGGCAATCCAAAAGTGGCGACCATATTTGTTGGGAAGAAGATTTTTGGTTGATCAGAGTAGTCTCAAGTTTA
TTCTTGAGCAACTCCTAGTCACTGGGGAATATCAGAAGTGGTTGACAAAGATAATGGGTTATAACTTTGATATAGTTTACAAACTAGGCGTGGAGAATAAGGTAGCTAAT
GCCTTGTCAAAGGTCCCGAGTGCTATTGAATTTGCAGCAGTAACTCTTGTTGGGGGATTGAATAGAGGACTTATTCATGATCAACAAGTTCATGAAAGTTAA
Protein sequenceShow/hide protein sequence
MDDILVYSRSLMDHVGHLQVVLAVLKKHQLVANKNKCNFSLRQIEYLGHIVYGVGVSANPSKLAAMERWPVPRNLKELRGFLGLSATDAFQLLKRAMMTIPVLRLLDFSR
EFFIEADASSVGVGVVLMQYGHPIAYFSNALAPLHINKALYERELMAIVMAIQKWRPYLLGRRFLVDQSSLKFILEQLLVTGEYQKWLTKIMGYNFDIVYKLGVENKVAN
ALSKVPSAIEFAAVTLVGGLNRGLIHDQQVHES