; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0010436 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010436
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr9:47251004..47253962
RNA-Seq ExpressionLag0010436
SyntenyLag0010436
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN75040.1 hypothetical protein VITISV_026478 [Vitis vinifera]3.0e-2734.76Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS
        K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I SIYG  P GW  N           K   +      P  R +  + + 
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS

Query:  LKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSE
        ++       W++   D   W+L  SG+F+ KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK+Q +     L P  C LC  + 
Subjt:  LKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSE

Query:  EHLDHLFIHC
        E +DHLF+HC
Subjt:  EHLDHLFIHC

RVW20303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.5e-2634.7Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS
        K  +LV WE      + GGLG+G ++ RN +L+ KWLWRY +E ++LW ++I+SIYG+   GW  N           K   +        TR +    D 
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS

Query:  LK--ETLIANCWDNTS-------QDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPS
        ++  E L    W + S        D   W+L  SG+F+ KS F  +++IS   S    NL+W  + P K+K F+W +A++ +NT+D +Q +     LSP 
Subjt:  LK--ETLIANCWDNTS-------QDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPS

Query:  ACRLCILSEEHLDHLFIHC
         C LC+   E +DHLF+HC
Subjt:  ACRLCILSEEHLDHLFIHC

RVW67766.1 hypothetical protein CK203_065561 [Vitis vinifera]1.8e-2736.27Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN-PFRGKKATKYGLTLLPATRPLSSSRDSLKETLI
        K  +L++W+  S     GGLG G+ + RN +L+ KWLWR+ +E++ LW K+I SIYG  P GW  N   R      +        R +SS    L    +
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN-PFRGKKATKYGLTLLPATRPLSSSRDSLKETLI

Query:  ANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHL
        A        D   W+L  SG+FS KS F  ++K+S  I       +W  KSP KVK   W +A+  +NT+DK+Q +     L P  C LC  + E ++HL
Subjt:  ANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHL

Query:  FIHC
        F+HC
Subjt:  FIHC

RVW89631.1 hypothetical protein CK203_036369 [Vitis vinifera]3.9e-2734.48Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPFRGKKATKYGLTLLPATRPLSSSRDSLKETLIA
        K  +L+ W+  S     GGLG G  + RN +L+ KWLWR+ +E++ LW K+I SIYG  P GW  N        ++    L                   
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPFRGKKATKYGLTLLPATRPLSSSRDSLKETLIA

Query:  NCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLF
         C+  +  D   W+L  S +FS K  F  ++K+S  I   L   +W  K+P KVK   W +A+  +NT+DK+Q +     L P  C LC  +EE +DHLF
Subjt:  NCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLF

Query:  IHC
        +HC
Subjt:  IHC

RVX15530.1 putative ribonuclease H protein [Vitis vinifera]2.2e-2533.49Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN---------PFRGKKATKYGLTLLPATRPLSSSR
        K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I+SIYG  P GW  N         P++         +L    R +  + 
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN---------PFRGKKATKYGLTLLPATRPLSSSR

Query:  DSLKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCIL
        + ++       +       + W+L  SG+FS KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK+Q +     L P  C LC  
Subjt:  DSLKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCIL

Query:  SEEHLDHLFIHC
        + E +DHLF++C
Subjt:  SEEHLDHLFIHC

TrEMBL top hitse value%identityAlignment
A0A438CAL5 Transposon TX1 uncharacterized 149 kDa protein7.3e-2734.7Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS
        K  +LV WE      + GGLG+G ++ RN +L+ KWLWRY +E ++LW ++I+SIYG+   GW  N           K   +        TR +    D 
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS

Query:  LK--ETLIANCWDNTS-------QDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPS
        ++  E L    W + S        D   W+L  SG+F+ KS F  +++IS   S    NL+W  + P K+K F+W +A++ +NT+D +Q +     LSP 
Subjt:  LK--ETLIANCWDNTS-------QDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPS

Query:  ACRLCILSEEHLDHLFIHC
         C LC+   E +DHLF+HC
Subjt:  ACRLCILSEEHLDHLFIHC

A0A438G6D2 Uncharacterized protein8.6e-2836.27Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN-PFRGKKATKYGLTLLPATRPLSSSRDSLKETLI
        K  +L++W+  S     GGLG G+ + RN +L+ KWLWR+ +E++ LW K+I SIYG  P GW  N   R      +        R +SS    L    +
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN-PFRGKKATKYGLTLLPATRPLSSSRDSLKETLI

Query:  ANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHL
        A        D   W+L  SG+FS KS F  ++K+S  I       +W  KSP KVK   W +A+  +NT+DK+Q +     L P  C LC  + E ++HL
Subjt:  ANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHL

Query:  FIHC
        F+HC
Subjt:  FIHC

A0A438HYV0 zf-RVT domain-containing protein1.9e-2734.48Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPFRGKKATKYGLTLLPATRPLSSSRDSLKETLIA
        K  +L+ W+  S     GGLG G  + RN +L+ KWLWR+ +E++ LW K+I SIYG  P GW  N        ++    L                   
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPFRGKKATKYGLTLLPATRPLSSSRDSLKETLIA

Query:  NCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLF
         C+  +  D   W+L  S +FS K  F  ++K+S  I   L   +W  K+P KVK   W +A+  +NT+DK+Q +     L P  C LC  +EE +DHLF
Subjt:  NCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLF

Query:  IHC
        +HC
Subjt:  IHC

A0A438K2W1 Putative ribonuclease H protein1.0e-2533.49Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN---------PFRGKKATKYGLTLLPATRPLSSSR
        K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I+SIYG  P GW  N         P++         +L    R +  + 
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCN---------PFRGKKATKYGLTLLPATRPLSSSR

Query:  DSLKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCIL
        + ++       +       + W+L  SG+FS KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK+Q +     L P  C LC  
Subjt:  DSLKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCIL

Query:  SEEHLDHLFIHC
        + E +DHLF++C
Subjt:  SEEHLDHLFIHC

A5BV95 Reverse transcriptase domain-containing protein1.5e-2734.76Show/hide
Query:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS
        K  +LV WE  S     GGLG G ++ RN +L+ KWLWR+ +E++ LW K+I SIYG  P GW  N           K   +      P  R +  + + 
Subjt:  KGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPF-------RGKKATKYGLTLLPATRPLSSSRDS

Query:  LKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSE
        ++       W++   D   W+L  SG+F+ KS F  ++K+S  I       +W  K P KVK   W +A+  +NT+DK+Q +     L P  C LC  + 
Subjt:  LKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSE

Query:  EHLDHLFIHC
        E +DHLF+HC
Subjt:  EHLDHLFIHC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCCGTTGGCTTCGAGATTCTGGCAAGCAGCGACGATGGAAATGGCAAAAATAAAAGGTGCCAATCTAGTCGAGTGGGAATGGTCTTCTTTGCATAGCGTTCATGG
TGGGTTGGGAGTGGGCTCCCTAGCTCAAAGGAATTTCTCCTTGATGATCAAATGGCTTTGGAGGTACACGCAAGAGAAGAATTCCCTGTGGAGGAAGATTATTATTAGTA
TCTACGGGGCCTCCCCTGAAGGCTGGAAATGTAATCCTTTTAGAGGAAAAAAGGCAACAAAATATGGGTTGACATTGCTGCCAGCTACTCGACCTTTGAGCAGCTCACGA
GATTCATTAAAAGAGACGTTGATTGCAAATTGTTGGGATAATACTTCTCAAGATGGGATTAGATGGACCCTTAAACGATCTGGTGTGTTCTCAGCCAAATCCATTTTCCA
GAAAATTACTAAAATCTCTCCCAATATTAGTCAGACTTTATGTAATCTTATTTGGAAGCATAAAAGCCCGAAGAAGGTCAAGGTGTTCTTGTGGTCCCTAGCATATAGGA
GTCTAAATACTGATGATAAAGTGCAACAGAAGTTCAAGAATTTGTATTTGTCTCCTTCCGCTTGCAGACTCTGCATTCTTTCTGAGGAGCACTTGGATCACCTTTTTATT
CACTGTGATTTTGCTAAGAAAGAGCTCGTGGTCGATTCTATTACTAGTTTAATGGTTTCTAATATTCCTGTAACTTCTCAGGTGGAACCTCCTATGAGTTATGCAGAAAC
CCTTAAGATTTTCCTAAGTCTAGTACAAGGTTCTGGGGTTGTTGGTGTATCAAAGAATTCCACATTTCCTCAAAATCGTAAGCATAAGTCCCCTAAGAAAGTCAAAATCT
TCCTCTGGACCGTGGCTTACAGAAGCTTGAATACTGATGATAGAGTTCAAAGAAAGCTTCAAAATTGGGTTCTCTCCCCCTCAGTTTGTAGACTATGCTTTAAAGAGAGT
GAAGATATTGATCATCTTCTTCTGCATTGCGATTTCGCCTATAAGAGTTGGAACTTTGTTGCCGGTCTGCTGGGATTATCGTTTTGTGTTCCGAAGAAACTGGATGGTTG
GCTTGAAGAAGGGCTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATTGGGGTTGTGCGTTTAGAGCTACTATTTGGCTTTTGTGGAAAGAAAGGAATGCTAGAAC
CTTTGGAAAAGAGTCGTCTTATTTTGATTCTTTTTGTAATTCTGTACAAAATACAGCCTCTTGGTGGATTACTTTACACAAAAGTTCTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCCGTTGGCTTCGAGATTCTGGCAAGCAGCGACGATGGAAATGGCAAAAATAAAAGGTGCCAATCTAGTCGAGTGGGAATGGTCTTCTTTGCATAGCGTTCATGG
TGGGTTGGGAGTGGGCTCCCTAGCTCAAAGGAATTTCTCCTTGATGATCAAATGGCTTTGGAGGTACACGCAAGAGAAGAATTCCCTGTGGAGGAAGATTATTATTAGTA
TCTACGGGGCCTCCCCTGAAGGCTGGAAATGTAATCCTTTTAGAGGAAAAAAGGCAACAAAATATGGGTTGACATTGCTGCCAGCTACTCGACCTTTGAGCAGCTCACGA
GATTCATTAAAAGAGACGTTGATTGCAAATTGTTGGGATAATACTTCTCAAGATGGGATTAGATGGACCCTTAAACGATCTGGTGTGTTCTCAGCCAAATCCATTTTCCA
GAAAATTACTAAAATCTCTCCCAATATTAGTCAGACTTTATGTAATCTTATTTGGAAGCATAAAAGCCCGAAGAAGGTCAAGGTGTTCTTGTGGTCCCTAGCATATAGGA
GTCTAAATACTGATGATAAAGTGCAACAGAAGTTCAAGAATTTGTATTTGTCTCCTTCCGCTTGCAGACTCTGCATTCTTTCTGAGGAGCACTTGGATCACCTTTTTATT
CACTGTGATTTTGCTAAGAAAGAGCTCGTGGTCGATTCTATTACTAGTTTAATGGTTTCTAATATTCCTGTAACTTCTCAGGTGGAACCTCCTATGAGTTATGCAGAAAC
CCTTAAGATTTTCCTAAGTCTAGTACAAGGTTCTGGGGTTGTTGGTGTATCAAAGAATTCCACATTTCCTCAAAATCGTAAGCATAAGTCCCCTAAGAAAGTCAAAATCT
TCCTCTGGACCGTGGCTTACAGAAGCTTGAATACTGATGATAGAGTTCAAAGAAAGCTTCAAAATTGGGTTCTCTCCCCCTCAGTTTGTAGACTATGCTTTAAAGAGAGT
GAAGATATTGATCATCTTCTTCTGCATTGCGATTTCGCCTATAAGAGTTGGAACTTTGTTGCCGGTCTGCTGGGATTATCGTTTTGTGTTCCGAAGAAACTGGATGGTTG
GCTTGAAGAAGGGCTGCAAGCTTGGAATTTGAGAAAGAAGGCCAAGGTGATTGGGGTTGTGCGTTTAGAGCTACTATTTGGCTTTTGTGGAAAGAAAGGAATGCTAGAAC
CTTTGGAAAAGAGTCGTCTTATTTTGATTCTTTTTGTAATTCTGTACAAAATACAGCCTCTTGGTGGATTACTTTACACAAAAGTTCTTTTGTAA
Protein sequenceShow/hide protein sequence
MVPLASRFWQAATMEMAKIKGANLVEWEWSSLHSVHGGLGVGSLAQRNFSLMIKWLWRYTQEKNSLWRKIIISIYGASPEGWKCNPFRGKKATKYGLTLLPATRPLSSSR
DSLKETLIANCWDNTSQDGIRWTLKRSGVFSAKSIFQKITKISPNISQTLCNLIWKHKSPKKVKVFLWSLAYRSLNTDDKVQQKFKNLYLSPSACRLCILSEEHLDHLFI
HCDFAKKELVVDSITSLMVSNIPVTSQVEPPMSYAETLKIFLSLVQGSGVVGVSKNSTFPQNRKHKSPKKVKIFLWTVAYRSLNTDDRVQRKLQNWVLSPSVCRLCFKES
EDIDHLLLHCDFAYKSWNFVAGLLGLSFCVPKKLDGWLEEGLQAWNLRKKAKVIGVVRLELLFGFCGKKGMLEPLEKSRLILILFVILYKIQPLGGLLYTKVLL