CuGenDBv2

Gene ID	Lag0010437
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	PB1 domain-containing protein
Genome location	chr9:47279599..47281025
RNA-Seq Expression	Lag0010437
Synteny	Lag0010437
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652255.1 hypothetical protein Csa_022250 [Cucumis sativus]

5.1e-40

52.14

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Query:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------
        LPHSALDSLISLSS DDL FM  EHLRL  SSS+SSRIRLF+ FPEPEK HNVIHHPKTEAW+  ALKSAK  ++           GL+G ++       
Subjt:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------

Query:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC-PTNSCSSVENPVMSIPVISESNF
            F L    ++     FG   SS         +KPQSEDFGLSS+         SDSV          ++  D  PTNSCSSVEN V S+PVI+ESNF
Subjt:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC-PTNSCSSVENPVMSIPVISESNF

Query:  HDPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF
        H+ AAGV  +N  DFSGYA   RPN FQH   QF
Subjt:  HDPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF

XP_008441273.1 PREDICTED: uncharacterized protein LOC103485455 [Cucumis melo]

8.6e-40

52.51

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Query:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQFFLWIIV
        LP SALDSLISLSSD DL FM  EHLRL  SSS+SSRIRLF+ FPEPEK HNVIHHPKTEAW+  ALKSAK  ++           GL+G ++    + +
Subjt:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQFFLWIIV

Query:  FFGFFGYCVSSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC---------PTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNAIDF
          G F    S V   S  FG SS  ++  L   S  ++  +    L+SV  DC         PTNSCSSVEN V S+PVISESNFH+ AAGV  +N  DF
Subjt:  FFGFFGYCVSSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC---------PTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNAIDF

Query:  SGYALASRPNPFQHHGFQF
        SGYA   +PN FQH   QF
Subjt:  SGYALASRPNPFQHHGFQF

XP_022133762.1 uncharacterized protein LOC111006259 [Momordica charantia]

2.0e-44

55.86

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Query:  KLPHSALDSLISLSSDDDLQFMLCEHLRLSSSTS-----SRIRLFVLFPEPEK---AHNVIHHPKTEAWY--ALKSAKFCRRAAIAS-----WGLMGTDQ
        +LPHSALDSLISLSSDDDLQFMLCEHLRLSSS S     SRIRLFV FPEPEK   A NVIHHPKTEAW   AL+SAK  ++    S      GL+G ++
Subjt:  KLPHSALDSLISLSSDDDLQFMLCEHLRLSSSTS-----SRIRLFVLFPEPEK---AHNVIHHPKTEAWY--ALKSAKFCRRAAIAS-----WGLMGTDQ

Query:  FFLWIIVFFGFFGYCVSSVKPQSEDFGLS----SLDNAVKLQTTSDSVEFSNGLKILNSVQRD-CPTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNA
              +  G      S V   S  FG S    SL N   ++  ++   FS+   + N+V  +   T+SCSS+EN VMSIPVISES FHDPAAG+HPQNA
Subjt:  FFLWIIVFFGFFGYCVSSVKPQSEDFGLS----SLDNAVKLQTTSDSVEFSNGLKILNSVQRD-CPTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNA

Query:  IDFSGYALASRPNPFQHHGFQF
        IDFSGY LA RPN FQ    QF
Subjt:  IDFSGYALASRPNPFQHHGFQF

XP_031736617.1 uncharacterized protein LOC101214062 [Cucumis sativus]

5.1e-40

52.14

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Query:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------
        LPHSALDSLISLSS DDL FM  EHLRL  SSS+SSRIRLF+ FPEPEK HNVIHHPKTEAW+  ALKSAK  ++           GL+G ++       
Subjt:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------

Query:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC-PTNSCSSVENPVMSIPVISESNF
            F L    ++     FG   SS         +KPQSEDFGLSS+         SDSV          ++  D  PTNSCSSVEN V S+PVI+ESNF
Subjt:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC-PTNSCSSVENPVMSIPVISESNF

Query:  HDPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF
        H+ AAGV  +N  DFSGYA   RPN FQH   QF
Subjt:  HDPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF

XP_038884113.1 uncharacterized protein LOC120075037 [Benincasa hispida]

2.0e-52

58.37

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Query:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------
        LPHSALDSLISLSSDDDL FM CEHLRL  SSS+SSRIRLF+  PEPEK HNVIHHPKTEAW+  ALKSAK  ++           GL+G ++       
Subjt:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------

Query:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDCPTNSCSSVENPVMSIPVISESNFH
            F L    ++     FG   SS          KPQ+EDFGLSSLDNA  LQT SDS        I        PTNSCSSVEN VMSIPVISESNFH
Subjt:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDCPTNSCSSVENPVMSIPVISESNFH

Query:  DPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF
        + AAGV PQN  DFSGYALASRPNPFQ    QF
Subjt:  DPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LMW1 PB1 domain-containing protein

2.4e-40

52.14

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Query:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------
        LPHSALDSLISLSS DDL FM  EHLRL  SSS+SSRIRLF+ FPEPEK HNVIHHPKTEAW+  ALKSAK  ++           GL+G ++       
Subjt:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQ-------

Query:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC-PTNSCSSVENPVMSIPVISESNF
            F L    ++     FG   SS         +KPQSEDFGLSS+         SDSV          ++  D  PTNSCSSVEN V S+PVI+ESNF
Subjt:  ----FFL---WIIVFFGFFGYCVSS---------VKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC-PTNSCSSVENPVMSIPVISESNF

Query:  HDPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF
        H+ AAGV  +N  DFSGYA   RPN FQH   QF
Subjt:  HDPAAGVHPQNAIDFSGYALASRPNPFQHHGFQF

A0A1S3B318 uncharacterized protein LOC103485455

4.2e-40

52.51

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Query:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQFFLWIIV
        LP SALDSLISLSSD DL FM  EHLRL  SSS+SSRIRLF+ FPEPEK HNVIHHPKTEAW+  ALKSAK  ++           GL+G ++    + +
Subjt:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQFFLWIIV

Query:  FFGFFGYCVSSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC---------PTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNAIDF
          G F    S V   S  FG SS  ++  L   S  ++  +    L+SV  DC         PTNSCSSVEN V S+PVISESNFH+ AAGV  +N  DF
Subjt:  FFGFFGYCVSSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC---------PTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNAIDF

Query:  SGYALASRPNPFQHHGFQF
        SGYA   +PN FQH   QF
Subjt:  SGYALASRPNPFQHHGFQF

A0A5D3BU91 Phox/Bem1p

4.2e-40

52.51

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Query:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQFFLWIIV
        LP SALDSLISLSSD DL FM  EHLRL  SSS+SSRIRLF+ FPEPEK HNVIHHPKTEAW+  ALKSAK  ++           GL+G ++    + +
Subjt:  LPHSALDSLISLSSDDDLQFMLCEHLRL--SSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRR-----AAIASWGLMGTDQFFLWIIV

Query:  FFGFFGYCVSSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC---------PTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNAIDF
          G F    S V   S  FG SS  ++  L   S  ++  +    L+SV  DC         PTNSCSSVEN V S+PVISESNFH+ AAGV  +N  DF
Subjt:  FFGFFGYCVSSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDC---------PTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNAIDF

Query:  SGYALASRPNPFQHHGFQF
        SGYA   +PN FQH   QF
Subjt:  SGYALASRPNPFQHHGFQF

A0A6J1BXN6 uncharacterized protein LOC111006259

9.6e-45

55.86

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Query:  KLPHSALDSLISLSSDDDLQFMLCEHLRLSSSTS-----SRIRLFVLFPEPEK---AHNVIHHPKTEAWY--ALKSAKFCRRAAIAS-----WGLMGTDQ
        +LPHSALDSLISLSSDDDLQFMLCEHLRLSSS S     SRIRLFV FPEPEK   A NVIHHPKTEAW   AL+SAK  ++    S      GL+G ++
Subjt:  KLPHSALDSLISLSSDDDLQFMLCEHLRLSSSTS-----SRIRLFVLFPEPEK---AHNVIHHPKTEAWY--ALKSAKFCRRAAIAS-----WGLMGTDQ

Query:  FFLWIIVFFGFFGYCVSSVKPQSEDFGLS----SLDNAVKLQTTSDSVEFSNGLKILNSVQRD-CPTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNA
              +  G      S V   S  FG S    SL N   ++  ++   FS+   + N+V  +   T+SCSS+EN VMSIPVISES FHDPAAG+HPQNA
Subjt:  FFLWIIVFFGFFGYCVSSVKPQSEDFGLS----SLDNAVKLQTTSDSVEFSNGLKILNSVQRD-CPTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNA

Query:  IDFSGYALASRPNPFQHHGFQF
        IDFSGY LA RPN FQ    QF
Subjt:  IDFSGYALASRPNPFQHHGFQF

A0A6J1E0T6 uncharacterized protein LOC111429779

1.9e-37

50.89

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Query:  NLLYQLKLPHSALDSLISLSSDDDLQFMLCEHLRLSSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRRAAIASWG-----LMGTDQFF
        +L YQ  LPHS LDSLISLSSDDDLQ ML  HL LSSSTSSRIRLF+LFPEPEK  NVIHHPKTEAW+  ALKSAK  ++      G     L+G ++  
Subjt:  NLLYQLKLPHSALDSLISLSSDDDLQFMLCEHLRLSSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWY--ALKSAKFCRRAAIASWG-----LMGTDQFF

Query:  LWIIVFFGFFGYCV----------SSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDCPTNSCSSVENPVMSIPVISESNFHDPAAGVHP
          ++   G  G  +          S     S DFGLSSLDN VKL TTSDSV                   +  S ENPV       +SNFH   +GV+P
Subjt:  LWIIVFFGFFGYCV----------SSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDCPTNSCSSVENPVMSIPVISESNFHDPAAGVHP

Query:  QNAIDFSGYALASRPNPFQHHGFQ
        QN I FSGYALASRPN FQ    +
Subjt:  QNAIDFSGYALASRPNPFQHHGFQ

SwissProt top hits

e value

%identity

Alignment

Q9FHY0 Putative 26S proteasome non-ATPase regulatory subunit 8 homolog B

5.0e-06

45.21

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Query:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKL-PHSALD-SLISLSSDDDLQFMLCEHLRLSSSTSSRI
        MDP+L EVSQ FERFKAA +  D+D+C++LL QLKL  H  +  SL +L       F LC   R+  S    +
Subjt:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKL-PHSALD-SLISLSSDDDLQFMLCEHLRLSSSTSSRI

Q9SGW3 26S proteasome non-ATPase regulatory subunit 8 homolog A

5.9e-07

61.36

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Query:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKLPHSALDSL
        MDP+LTEVSQ FERFKAA  R DY++C++LL QLK+  +   SL
Subjt:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKLPHSALDSL

Arabidopsis top hits

e value

%identity

Alignment

AT1G64520.1 regulatory particle non-ATPase 12A

4.2e-08

61.36

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Query:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKLPHSALDSL
        MDP+LTEVSQ FERFKAA  R DY++C++LL QLK+  +   SL
Subjt:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKLPHSALDSL

AT5G16220.1 Octicosapeptide/Phox/Bem1p family protein

1.9e-05

26.17

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Query:  DPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLK----LPHSALDSLISLSSDDDLQFMLCEHLRLSSSTS---SRIRLFVLFPEPEKAHN---------
        D ++  +    E   A+LV H       + Y  K    LP   LDSLIS+ +D+D+Q M+ EH  LSS +S   SRIRLF LFP   +  N         
Subjt:  DPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLK----LPHSALDSLISLSSDDDLQFMLCEHLRLSSSTS---SRIRLFVLFPEPEKAHN---------

Query:  ----------------------------VIHHPKTEAWY--ALKSAKFCRR---------AAIASWGLMGTDQFFLWIIVFFGFFGYCVSSVK-PQSEDF
                                    V+ HPKTE W+  ALKS +  +          +   + G+ G +   L     FG     VSS   P  +  
Subjt:  ----------------------------VIHHPKTEAWY--ALKSAKFCRR---------AAIASWGLMGTDQFFLWIIVFFGFFGYCVSSVK-PQSEDF

Query:  GLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDCPTNSCSSVENPVMSIPVISESN
        G  ++ N+       +SV  ++   +      + P++S  + EN   S   ++E N
Subjt:  GLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDCPTNSCSSVENPVMSIPVISESN

AT5G42040.1 regulatory particle non-ATPase 12B

3.5e-07

45.21

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Query:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKL-PHSALD-SLISLSSDDDLQFMLCEHLRLSSSTSSRI
        MDP+L EVSQ FERFKAA +  D+D+C++LL QLKL  H  +  SL +L       F LC   R+  S    +
Subjt:  MDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKL-PHSALD-SLISLSSDDDLQFMLCEHLRLSSSTSSRI

Sequences

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CDS sequence

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ATGAACATCGCCATGGATCCGAAGCTAACTGAGGTCTCGCAGCACTTCGAGCGCTTCAAAGCTGCTCTTGTCAGGCACGATTATGATTCTTGTAACAATCTCCTCTATCA
GCTGAAGCTCCCTCACTCCGCCCTCGACTCTCTCATCTCCCTCTCCTCCGATGACGACCTTCAGTTCATGCTCTGCGAGCACCTCCGCCTCTCCTCTTCCACTTCCTCTC
GCATTAGGCTCTTCGTCTTATTCCCCGAGCCAGAGAAGGCTCACAACGTTATTCATCATCCCAAGACTGAGGCCTGGTATGCGCTTAAGAGTGCGAAATTTTGCAGAAGG
GCCGCGATTGCTTCGTGGGGTTTGATGGGGACGGACCAGTTCTTCCTTTGGATCATCGTCTTCTTCGGCTTCTTTGGCTATTGTGTCTCCTCCGTCAAACCTCAGAGTGA
GGACTTTGGACTCAGTTCGTTGGATAATGCTGTCAAGCTGCAGACAACTTCCGATTCCGTCGAGTTTTCTAATGGCCTAAAGATTTTGAATTCTGTACAGCGAGATTGCC
CTACCAACTCTTGTTCTTCAGTTGAGAATCCGGTTATGTCTATCCCTGTGATATCAGAGAGTAATTTTCACGACCCTGCTGCTGGAGTTCATCCCCAAAATGCCATTGAC
TTTTCAGGCTATGCACTAGCTTCTCGACCAAACCCTTTTCAGCATCATGGATTTCAGTTCTCTATTTAA

mRNA sequence

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Protein sequence

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MNIAMDPKLTEVSQHFERFKAALVRHDYDSCNNLLYQLKLPHSALDSLISLSSDDDLQFMLCEHLRLSSSTSSRIRLFVLFPEPEKAHNVIHHPKTEAWYALKSAKFCRR
AAIASWGLMGTDQFFLWIIVFFGFFGYCVSSVKPQSEDFGLSSLDNAVKLQTTSDSVEFSNGLKILNSVQRDCPTNSCSSVENPVMSIPVISESNFHDPAAGVHPQNAID
FSGYALASRPNPFQHHGFQFSI

Lag0010437 (gene) of Sponge gourd (AG-4) v1 genome