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Lag0010510 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010510
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr1:267149..267853
RNA-Seq ExpressionLag0010510
SyntenyLag0010510
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]3.0e-4543.64Show/hide
Query:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP
        MA   LLE W+NF LT+EE+   VD+D  A   T + L  SLI KLL+ R IS  V++   K AW +     +V+ +G N+FLF+     ++ RIL+ GP
Subjt:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP

Query:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS
        W FD+  L+    P+ + KP  M+F++V  WVHF +L +   N +MA RL NAIG FE+ ++       W   LRVRV  D+ KPL RGIK+ LD P+G 
Subjt:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS

Query:  IWTPIKYEKLPEICSYCGRI
         W PI+YE+LP+   +CGR+
Subjt:  IWTPIKYEKLPEICSYCGRI

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.2e-4946.82Show/hide
Query:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPW
        M  E LL  W+ F LT+EE+   +DVD  A  +  Q L +SL+GKLLA R IS +V+ +    AW +   LTVE +G NLFLF    + +  R++K GPW
Subjt:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPW

Query:  LFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYD-NGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS
         FDK  L+   KP      + +EF  V FW+H  +LPM   N +MA RL NAIG F + D N  G    W  SLR+RV++DITKPLRRGIK+ +D P+G 
Subjt:  LFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYD-NGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS

Query:  IWTPIKYEKLPEICSYCGRI
         W PI+YE+LP+ C +CG I
Subjt:  IWTPIKYEKLPEICSYCGRI

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.1e-4745.87Show/hide
Query:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP
        MA  +LLE W+NF LT+EEE T +DVD  A A T   L   L+GKL   R I+  VM+   ++AW +  +   V+ LG NLFLFS    +++ +I K GP
Subjt:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP

Query:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS
        W FD+  +L  +KP+ ++ P+ ++F  +P WV F +LP+      MA RL NA+G FEE D        W  +LRVRV+LDI+KPLRRGIK+ LD P+G 
Subjt:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS

Query:  IWTPIKYEKLPEICSYCG
         W PI+YE+LP+ C +CG
Subjt:  IWTPIKYEKLPEICSYCG

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]3.4e-3338.07Show/hide
Query:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD
        + LL+     +LT+EE+   V +  ++ ++        L+GKLL  R  + E M+    S W    G+ V  +G NLF+F     V++ R+L  GPW FD
Subjt:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD

Query:  KKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLD--EPLGSIW
         K LL   +  P V+P+ ++   V FWVH C LP+ L N  + E + NA+G+F + D   G +V W  ++R+RV LD+ KPLRRG+K+ L   EP   IW
Subjt:  KKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLD--EPLGSIW

Query:  TPIKYEKLPEICSYCGRI
           KYE+LP  C +CGR+
Subjt:  TPIKYEKLPEICSYCGRI

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]2.9e-3235.78Show/hide
Query:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD
        + L++     +LT+EE+   V +   + ++        L+GKLL  R  + E M+    S W    G+ V  +G NLF+F     V++ R+L  GPW FD
Subjt:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD

Query:  KKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRF--EEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGSIW
         K LL   +  P V+P+ ++   V FWVH C LP+ L N  + + + NA+G+F   +Y++GG   + W  ++R+RV +D+ KPLRRG+K+ L      IW
Subjt:  KKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRF--EEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGSIW

Query:  TPIKYEKLPEICSYCGRI
           KYE+LP  C +CGR+
Subjt:  TPIKYEKLPEICSYCGRI

TrEMBL top hitse value%identityAlignment
A0A1R3GTB5 Reverse transcriptase8.4e-3037.07Show/hide
Query:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD
        E L + WENFNLT EEE  EV VD +    T       LIGKLL+ R ++ EVMR      W +  GL V ++G NLF+F  +SD+E+ R+ +Q PW F+
Subjt:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD

Query:  KKFLLAFS-KPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGSIWT
        K  L+  S      V+   ++     FW    +LP+   N S+   +  + G  EE D  G + + W + LR R  L++TKPLRRG+ +      G I  
Subjt:  KKFLLAFS-KPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGSIWT

Query:  PIKYEKLPEICSYCGRIVGFYALKLVDSECNR
          +YEKLP+ C  CG       L  V++EC +
Subjt:  PIKYEKLPEICSYCGRIVGFYALKLVDSECNR

A0A6J1BSZ1 uncharacterized protein LOC1110054811.4e-4543.64Show/hide
Query:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP
        MA   LLE W+NF LT+EE+   VD+D  A   T + L  SLI KLL+ R IS  V++   K AW +     +V+ +G N+FLF+     ++ RIL+ GP
Subjt:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP

Query:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS
        W FD+  L+    P+ + KP  M+F++V  WVHF +L +   N +MA RL NAIG FE+ ++       W   LRVRV  D+ KPL RGIK+ LD P+G 
Subjt:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS

Query:  IWTPIKYEKLPEICSYCGRI
         W PI+YE+LP+   +CGR+
Subjt:  IWTPIKYEKLPEICSYCGRI

A0A6J1D765 uncharacterized protein LOC1110179021.2e-3135.94Show/hide
Query:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD
        +E+ + WE+F  T +E  T V +DR    +T+ +++  ++ KL   + IS E +R   KS W + +    E LG N+++   KS  E++R+L  GPW F+
Subjt:  EELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFD

Query:  KKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWK-ESLRVRVILDITKPLRRGIKVKLDEPLGSIWT
        K  LL  + P    +P  M F    FW+    +P +  +  MA  L   +G  EE +  G    GW    +RVRV +D++KPLRRGIK+K  +    IW 
Subjt:  KKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWK-ESLRVRVILDITKPLRRGIKVKLDEPLGSIWT

Query:  PIKYEKLPEICSYCGRI
        P++YEKLP+ C  CG+I
Subjt:  PIKYEKLPEICSYCGRI

A0A6J1DU55 uncharacterized protein LOC1110231355.6e-5046.82Show/hide
Query:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPW
        M  E LL  W+ F LT+EE+   +DVD  A  +  Q L +SL+GKLLA R IS +V+ +    AW +   LTVE +G NLFLF    + +  R++K GPW
Subjt:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPW

Query:  LFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYD-NGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS
         FDK  L+   KP      + +EF  V FW+H  +LPM   N +MA RL NAIG F + D N  G    W  SLR+RV++DITKPLRRGIK+ +D P+G 
Subjt:  LFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYD-NGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS

Query:  IWTPIKYEKLPEICSYCGRI
         W PI+YE+LP+ C +CG I
Subjt:  IWTPIKYEKLPEICSYCGRI

A0A6J1DX30 uncharacterized protein LOC1110248745.3e-4845.87Show/hide
Query:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP
        MA  +LLE W+NF LT+EEE T +DVD  A A T   L   L+GKL   R I+  VM+   ++AW +  +   V+ LG NLFLFS    +++ +I K GP
Subjt:  MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIP-SGLTVEKLGANLFLFSLKSDVEQARILKQGP

Query:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS
        W FD+  +L  +KP+ ++ P+ ++F  +P WV F +LP+      MA RL NA+G FEE D        W  +LRVRV+LDI+KPLRRGIK+ LD P+G 
Subjt:  WLFDKKFLLAFSKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGS

Query:  IWTPIKYEKLPEICSYCG
         W PI+YE+LP+ C +CG
Subjt:  IWTPIKYEKLPEICSYCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCGAGGAATTGCTAGAAAGTTGGGAAAACTTTAATCTGACTGCTGAAGAAGAGACTACAGAAGTAGATGTTGATCGTCAAGCAGCTGCAGTTACAAGTCAGTC
TCTCAGATTCAGTCTTATTGGAAAGCTTTTGGCGCCGAGGTTCATTTCCAGAGAGGTAATGCGGAAAAATTTCAAATCAGCATGGAACATTCCCAGCGGACTTACTGTTG
AAAAGTTGGGAGCAAACCTGTTTCTGTTTTCTCTGAAATCGGATGTGGAACAAGCCCGAATTCTCAAACAAGGACCATGGCTTTTCGACAAGAAGTTCCTGCTAGCTTTT
TCCAAGCCAATCCCAATGGTGAAACCGACTGCAATGGAGTTTAAGGATGTGCCCTTTTGGGTCCATTTTTGTGAACTCCCTATGGATTTATTTAATCACTCGATGGCGGA
GAGACTCGACAATGCTATTGGGCGCTTCGAGGAGTACGACAATGGTGGTGGTAGAGTAGTTGGATGGAAAGAAAGTCTCCGGGTCAGAGTCATTCTCGATATTACTAAGC
CGCTGCGTAGGGGCATCAAGGTAAAGCTTGATGAGCCCCTGGGGAGTATCTGGACTCCAATCAAATACGAGAAGTTGCCGGAAATATGTTCATACTGTGGCAGAATTGTT
GGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCGAGGAATTGCTAGAAAGTTGGGAAAACTTTAATCTGACTGCTGAAGAAGAGACTACAGAAGTAGATGTTGATCGTCAAGCAGCTGCAGTTACAAGTCAGTC
TCTCAGATTCAGTCTTATTGGAAAGCTTTTGGCGCCGAGGTTCATTTCCAGAGAGGTAATGCGGAAAAATTTCAAATCAGCATGGAACATTCCCAGCGGACTTACTGTTG
AAAAGTTGGGAGCAAACCTGTTTCTGTTTTCTCTGAAATCGGATGTGGAACAAGCCCGAATTCTCAAACAAGGACCATGGCTTTTCGACAAGAAGTTCCTGCTAGCTTTT
TCCAAGCCAATCCCAATGGTGAAACCGACTGCAATGGAGTTTAAGGATGTGCCCTTTTGGGTCCATTTTTGTGAACTCCCTATGGATTTATTTAATCACTCGATGGCGGA
GAGACTCGACAATGCTATTGGGCGCTTCGAGGAGTACGACAATGGTGGTGGTAGAGTAGTTGGATGGAAAGAAAGTCTCCGGGTCAGAGTCATTCTCGATATTACTAAGC
CGCTGCGTAGGGGCATCAAGGTAAAGCTTGATGAGCCCCTGGGGAGTATCTGGACTCCAATCAAATACGAGAAGTTGCCGGAAATATGTTCATACTGTGGCAGAATTGTT
GGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTAACCGTTGA
Protein sequenceShow/hide protein sequence
MAFEELLESWENFNLTAEEETTEVDVDRQAAAVTSQSLRFSLIGKLLAPRFISREVMRKNFKSAWNIPSGLTVEKLGANLFLFSLKSDVEQARILKQGPWLFDKKFLLAF
SKPIPMVKPTAMEFKDVPFWVHFCELPMDLFNHSMAERLDNAIGRFEEYDNGGGRVVGWKESLRVRVILDITKPLRRGIKVKLDEPLGSIWTPIKYEKLPEICSYCGRIV
GFYALKLVDSECNR