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Lag0010519 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010519
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionNuclear receptor corepressor 1
Genome locationchr1:454981..455913
RNA-Seq ExpressionLag0010519
SyntenyLag0010519
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_033747242.1 uncharacterized protein LOC117332448 isoform X1 [Pecten maximus]5.3e-0754.55Show/hide
Query:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
        H+ DR   GS M HQ D E  GS MGHQ DR   G  MGHQ DR   GS M H+  RE  GS MGH
Subjt:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
XP_033747243.1 uncharacterized protein LOC117332448 isoform X2 [Pecten maximus]5.3e-0754.55Show/hide
Query:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
        H+ DR   GS M HQ D E  GS MGHQ DR   G  MGHQ DR   GS M H+  RE  GS MGH
Subjt:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
XP_033747244.1 uncharacterized protein LOC117332448 isoform X3 [Pecten maximus]5.3e-0754.55Show/hide
Query:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
        H+ DR   GS M HQ D E  GS MGHQ DR   G  MGHQ DR   GS M H+  RE  GS MGH
Subjt:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
XP_033747245.1 uncharacterized protein LOC117332448 isoform X4 [Pecten maximus]5.3e-0754.55Show/hide
Query:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
        H+ DR   GS M HQ D E  GS MGHQ DR   G  MGHQ DR   GS M H+  RE  GS MGH
Subjt:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
XP_033747246.1 uncharacterized protein LOC117332448 isoform X5 [Pecten maximus]5.3e-0754.55Show/hide
Query:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
        H+ DR   GS M HQ D E  GS MGHQ DR   G  MGHQ DR   GS M H+  RE  GS MGH
Subjt:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
TrEMBL top hitse value%identityAlignment
A0A210Q1B9 Nuclear receptor corepressor 15.4e-0546.97Show/hide
Query:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
        H+ +R   GS M HQ D +  GS MGHQ +R   G  MGHQ +R   GS M H+  R+  GS MGH
Subjt:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
A0A7L2KSF6 FA5 factor (Fragment)2.9e-0643.94Show/hide
Query:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
        H P    TGSG+ H P    TGSG+GH       G G+GH P     GSG+ H P     GSG+GH
Subjt:  HRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGACGATCCCAACTCCTATTCGGCTTTTGAGGGTCTCACCTTGATCGTGCGTTTGTTTCTCCAAACGCTGGGTAAGGTTGAGACAATCGACCTTTTTTTAGCAAG
GCATCGACCCGACCGTGCGTACACTGGATCGGGGATGGAGCATCAACCCGACTGTGAGTACACTGGATCGGGGATGGGGCATCAATCCGACCGTGCGTACACTGGATTAG
GGATGGGGCATCAACCCGACCGTGCGTACACTGGATCGGGGATGGAGCATCGACCCCACCGTGAGTACACTGGATCGGGGATGGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGACGATCCCAACTCCTATTCGGCTTTTGAGGGTCTCACCTTGATCGTGCGTTTGTTTCTCCAAACGCTGGGTAAGGTTGAGACAATCGACCTTTTTTTAGCAAG
GCATCGACCCGACCGTGCGTACACTGGATCGGGGATGGAGCATCAACCCGACTGTGAGTACACTGGATCGGGGATGGGGCATCAATCCGACCGTGCGTACACTGGATTAG
GGATGGGGCATCAACCCGACCGTGCGTACACTGGATCGGGGATGGAGCATCGACCCCACCGTGAGTACACTGGATCGGGGATGGGGCATTGA
Protein sequenceShow/hide protein sequence
MQDDPNSYSAFEGLTLIVRLFLQTLGKVETIDLFLARHRPDRAYTGSGMEHQPDCEYTGSGMGHQSDRAYTGLGMGHQPDRAYTGSGMEHRPHREYTGSGMGH