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Lag0010524 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010524
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr1:545095..547877
RNA-Seq ExpressionLag0010524
SyntenyLag0010524
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8542446.1 hypothetical protein F0562_023418 [Nyssa sinensis]1.1e-2663.33Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISAS++++ S R IWLDL++R+Q++N PRIFQLK +L NL Q+Q SV+ YFTKLKT+W E  +YRP CSCGKCSCGGVK L D+ Q E+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

XP_022148562.1 uncharacterized protein LOC111017196 [Momordica charantia]9.8e-3171.11Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISASVL++ S R IWLDLQER+QR+NRPRIFQL+ DL+ L QDQ SV+ YFTKLKTLW E  +YRP CSCG+C+CGGVK L++YFQTE+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

XP_038887168.1 uncharacterized protein LOC120077355 [Benincasa hispida]7.8e-2868.54Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTE
        EISAS+ +S S + IW+DLQERYQR+NRPR+FQL  +++NL Q+Q SVTTY+ KLKTLWNE  SYRP+CSCGKC+C GVK L  YFQTE
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTE

XP_038896588.1 uncharacterized protein LOC120084843 [Benincasa hispida]1.1e-2666.67Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISAS+ +S S + IW DLQE YQRKNRPR+FQL  +++NL+Q+Q SVTTY+ KLK LWNE  SY P+CSCGKC+CGGVK L  YFQTE+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

XP_038904477.1 uncharacterized protein LOC120090845 [Benincasa hispida]1.1e-2968.89Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISAS+ +S S + IW+DLQERYQRKNRPR+FQL+ + +NL+Q+Q S+TTY+ KLKTLWNE  SYRP+CSCGKC+CGGVK L  YFQTE+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

TrEMBL top hitse value%identityAlignment
A0A5J5B2C5 Uncharacterized protein1.6e-2662.22Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISAS++++   R IWLDL++R+Q++N PRIFQLK +L NL Q+Q SV+ YFTK+KT+W E  +YRP CSCGKC CGGVK L DY QTE+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

A0A5J5BIH5 Uncharacterized protein5.4e-2763.33Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISAS++++ S R IWLDL++R+Q++N PRIFQLK +L NL Q+Q SV+ YFTKLKT+W E  +YRP CSCGKCSCGGVK L D+ Q E+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

A0A5J5BKC2 Uncharacterized protein1.6e-2663.33Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISAS++++ S R IWLDL++R+Q++NRPRIFQLK +L NL Q+Q SV+ YFTKLKT+W E  +YR  CSCGKCSCGGVK L D+ Q E+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

A0A6J1D5E3 uncharacterized protein LOC1110171964.8e-3171.11Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        EISASVL++ S R IWLDLQER+QR+NRPRIFQL+ DL+ L QDQ SV+ YFTKLKTLW E  +YRP CSCG+C+CGGVK L++YFQTE+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

A0A6J1DNP7 uncharacterized protein LOC1110220657.1e-2765.56Show/hide
Query:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF
        +ISASVL+S S   IWLDL+ER+QR+NRPRIFQL+ +L+NLTQDQ SVT YFT+LKTLW+E   YRP CSCG+CS GGVK +  ++Q E+
Subjt:  EISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYRPTCSCGKCSCGGVKKLLDYFQTEF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).9.5e-0836.71Show/hide
Query:  SVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYR--PTCSCGKCSCGGVKK
        SV+Y+ +   +W DL+  +      +I+QL+  LA L Q   SV  YF KL  +W E   Y   P C CG C+C   K+
Subjt:  SVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEFGSYR--PTCSCGKCSCGGVKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCTTTTCTTATCACAGGGGTGGATGGAGTCTCCAAGAGTTTTAGGAATGGACAGTCGAGAAGAGTCTGTCGAGTCAAGAGCGATGCCCCCCATGCTTCCTGGAA
CAACATTAAAGAAAGAGGGGGTTTAGGGTGGGTAGTTCATGACACTGTAGGATCTTCTATCTATGTCGGAATGCTTCAAATTAAGGAAGAATGGTCGATTAAAGCTTTGG
AAACAAAAGCAATTTTGAAAGGGTTTAGAAGCTTACCATCGTTAGGGCTCATGCATGTTGTTGATCCTAAACCGAAGATTATGAAAAACCCTAAATACTCCAAAGTTATC
ACCGCATCAGCATTTTTCAAACAAAAAACACCACACAACAAGGCAAGGCACGAAGGCATCTCCAGGCGAGTCAACGAAGACAACGGCGACACGACAAACTCACGATGGCA
GCGACGACGAGTTGACGATTTTCAGGCACAATCGGAGATTTCTGCCAGTGTCCTTTATTCTCCTTCTACTCGGTATATTTGGTTGGATCTTCAAGAGCGCTACCAACGTA
AGAATCGACCTCGAATATTCCAGCTCAAATGCGATTTGGCAAATCTTACTCAAGATCAACAATCAGTCACGACGTATTTTACCAAATTAAAGACGCTTTGGAATGAATTT
GGTTCATATCGCCCTACTTGTTCTTGTGGCAAATGTTCTTGTGGTGGTGTCAAGAAATTACTTGATTACTTCCAGACTGAGTTTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTTCTTTTCTTATCACAGGGGTGGATGGAGTCTCCAAGAGTTTTAGGAATGGACAGTCGAGAAGAGTCTGTCGAGTCAAGAGCGATGCCCCCCATGCTTCCTGGAA
CAACATTAAAGAAAGAGGGGGTTTAGGGTGGGTAGTTCATGACACTGTAGGATCTTCTATCTATGTCGGAATGCTTCAAATTAAGGAAGAATGGTCGATTAAAGCTTTGG
AAACAAAAGCAATTTTGAAAGGGTTTAGAAGCTTACCATCGTTAGGGCTCATGCATGTTGTTGATCCTAAACCGAAGATTATGAAAAACCCTAAATACTCCAAAGTTATC
ACCGCATCAGCATTTTTCAAACAAAAAACACCACACAACAAGGCAAGGCACGAAGGCATCTCCAGGCGAGTCAACGAAGACAACGGCGACACGACAAACTCACGATGGCA
GCGACGACGAGTTGACGATTTTCAGGCACAATCGGAGATTTCTGCCAGTGTCCTTTATTCTCCTTCTACTCGGTATATTTGGTTGGATCTTCAAGAGCGCTACCAACGTA
AGAATCGACCTCGAATATTCCAGCTCAAATGCGATTTGGCAAATCTTACTCAAGATCAACAATCAGTCACGACGTATTTTACCAAATTAAAGACGCTTTGGAATGAATTT
GGTTCATATCGCCCTACTTGTTCTTGTGGCAAATGTTCTTGTGGTGGTGTCAAGAAATTACTTGATTACTTCCAGACTGAGTTTTCATGA
Protein sequenceShow/hide protein sequence
MISFLITGVDGVSKSFRNGQSRRVCRVKSDAPHASWNNIKERGGLGWVVHDTVGSSIYVGMLQIKEEWSIKALETKAILKGFRSLPSLGLMHVVDPKPKIMKNPKYSKVI
TASAFFKQKTPHNKARHEGISRRVNEDNGDTTNSRWQRRRVDDFQAQSEISASVLYSPSTRYIWLDLQERYQRKNRPRIFQLKCDLANLTQDQQSVTTYFTKLKTLWNEF
GSYRPTCSCGKCSCGGVKKLLDYFQTEFS