CuGenDBv2

Gene ID	Lag0010549
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	Transposon TX1 uncharacterized 149 kDa protein
Genome location	chr1:1036287..1036679
RNA-Seq Expression	Lag0010549
Synteny	Lag0010549
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

CAN74319.1 hypothetical protein VITISV_035345 [Vitis vinifera]

3.1e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

CAN79190.1 hypothetical protein VITISV_000232 [Vitis vinifera]

7.0e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

RVW20303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

7.0e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

RVW74143.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

3.1e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

RVX12140.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]

7.0e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

TrEMBL top hits

e value

%identity

Alignment

A0A438CAL5 Transposon TX1 uncharacterized 149 kDa protein

3.4e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

A0A438GPL3 Transposon TX1 uncharacterized 149 kDa protein

1.5e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

A0A438JT56 Transposon TX1 uncharacterized 149 kDa protein

3.4e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

A5B9F0 Reverse transcriptase domain-containing protein

1.5e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

A5BQD9 Reverse transcriptase domain-containing protein

3.4e-20

37.88

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Query:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA
        +L + E+    QK+++KW++EGD N+ FFH+    ++NR FI +LE++ G +L +   I+ EIL +++K Y +     + +EG++WSPI+S+    LE  
Subjt:  QLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEA

Query:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC
        F+E EI KA+  M   K+PGP+G     F++C
Subjt:  FSESEILKAVQDMGNLKSPGPEG---EFFKNC

SwissProt top hits

e value

%identity

Alignment

P08548 LINE-1 reverse transcriptase homolog

2.9e-05

29.41

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Query:  TTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKK----SYENVPSPKFVLEGVEWSPITSQDREMLEEAFSESEILKAVQDMGNLKSPGPEG---EF
        T  K+ ++ I  + +    I +  +EI+  +  +YKK     YEN+      LE      ++ ++ EML    S SEI   +Q++   KSPGP+G   EF
Subjt:  TTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKK----SYENVPSPKFVLEGVEWSPITSQDREMLEEAFSESEILKAVQDMGNLKSPGPEG---EF

Query:  FK
        ++
Subjt:  FK

P11369 LINE-1 retrotransposable element ORF2 protein

5.6e-04

27.88

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Query:  RWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSY----ENVPSPKFVLEGVEWSPITSQDREMLEEAFSESEILKAVQDMGNLKSPGPEG---
        R T   +++  I  + ++ G+I +   EI+N I SFYK+ Y    EN+      L+  +   +     + L    S  EI   +  +   KSPGP+G   
Subjt:  RWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSY----ENVPSPKFVLEGVEWSPITSQDREMLEEAFSESEILKAVQDMGNLKSPGPEG---

Query:  EFFK
        EF++
Subjt:  EFFK

Arabidopsis top hits

e value

%identity

Alignment

AT1G43760.1 DNAse I-like superfamily protein

3.8e-08

31.71

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Query:  QKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKK---SYENVPSPKFVLEGVEWSPITSQD--REMLEEAFSESEI
        QKS+IKWL++GD NT FFH+   A + +  I  L  D    + +  +++  I+++Y     S  ++ +P  V    +  P    D     L    S+ EI
Subjt:  QKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKK---SYENVPSPKFVLEGVEWSPITSQD--REMLEEAFSESEI

Query:  LKAVQDMGNLKSPGPE---GEFF
          AV  M   K+PGP+    EFF
Subjt:  LKAVQDMGNLKSPGPE---GEFF

Sequences

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CDS sequence

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ATGCAACTGACTGTGAATGAGCAAAGATGTCTTAGTCAGAAGAGCAAGATCAAATGGCTTAGGGAAGGTGATGAGAACACCAACTTTTTCCACAGATGGACCACAGCCAA
AAAGAACAGGGCCTTCATTTTGATCCTTGAAGATGATACCGGAAATATCCTTTCCTCTGAAGCTGAGATTGAAAATGAAATATTAAGTTTCTATAAAAAGTCATATGAGA
ATGTTCCTAGCCCGAAGTTTGTGCTTGAAGGGGTGGAGTGGTCCCCCATTACCTCTCAAGATAGAGAGATGTTGGAAGAAGCTTTTAGTGAATCTGAAATACTCAAAGCA
GTGCAAGACATGGGCAATTTGAAATCTCCAGGGCCAGAGGGAGAGTTTTTTAAAAATTGCTAG

mRNA sequence

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Protein sequence

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MQLTVNEQRCLSQKSKIKWLREGDENTNFFHRWTTAKKNRAFILILEDDTGNILSSEAEIENEILSFYKKSYENVPSPKFVLEGVEWSPITSQDREMLEEAFSESEILKA
VQDMGNLKSPGPEGEFFKNC

Lag0010549 (gene) of Sponge gourd (AG-4) v1 genome