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Lag0010554 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010554
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationchr1:1066775..1067119
RNA-Seq ExpressionLag0010554
SyntenyLag0010554
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038601.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]7.5e-1849.15Show/hide
Query:  TNKVDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESET-----YGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNS
        T  V+ VLR+LFH Y+   SS +  D+              DV D+ ET     YG   SF  VETTT  +ESEIDVYLL++L   DS+FD+L WWK N 
Subjt:  TNKVDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESET-----YGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNS

Query:  HQFEILSAISRDLLAIPV
        ++FE+LS ISRD+LAIPV
Subjt:  HQFEILSAISRDLLAIPV

XP_016903504.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo]9.7e-1845.32Show/hide
Query:  TNKVDQVLRQLFHAYSSSSSSGS-GSDSVSIITEENGEAQT--------------------MDVDDESET-----YGFARSFSSVETTTFVRESEIDVYL
        T  V+ VLR+LFH Y+   SSG+  S S S  T  +  A                       DV D+ ET     YG   SF  VETTT  +ESEIDVYL
Subjt:  TNKVDQVLRQLFHAYSSSSSSGS-GSDSVSIITEENGEAQT--------------------MDVDDESET-----YGFARSFSSVETTTFVRESEIDVYL

Query:  LETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV
        L++L   DS+FD+L WWK N ++FE+LS ISRD+LAIPV
Subjt:  LETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV

XP_031739490.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis sativus]2.3e-1947.48Show/hide
Query:  TNKVDQVLRQLFHAYS-SSSSSGSGSDSVSIITEENGEAQT--------------------MDVDDESET-----YGFARSFSSVETTTFVRESEIDVYL
        T  V+  LR+LFH Y+   SSS   S S S  T  +  A                      +DV DE ET     YG   SF  VETTT  +ESEIDVYL
Subjt:  TNKVDQVLRQLFHAYS-SSSSSGSGSDSVSIITEENGEAQT--------------------MDVDDESET-----YGFARSFSSVETTTFVRESEIDVYL

Query:  LETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV
        LE+LA  DS FD+L+WWK N H+FE+LS ISRD+LAIPV
Subjt:  LETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV

XP_038888298.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Benincasa hispida]8.8e-1945.64Show/hide
Query:  NKVDQVLRQLFHAY-------SSSSSSGSGSDSVSIITEENGEA-----------------------QTMDVDDESE-------TYGFARSFSSVETTTF
        N V+ VLR+LFH Y       SS+SSS S S SVS+    +  A                         +DVD E+E        YG   SF   ETTTF
Subjt:  NKVDQVLRQLFHAY-------SSSSSSGSGSDSVSIITEENGEA-----------------------QTMDVDDESE-------TYGFARSFSSVETTTF

Query:  VRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV
         +ESEIDVYLLE+L   DS+FD+L WWK N H+FE+LS ISRD+LAIPV
Subjt:  VRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV

XP_038888299.1 zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Benincasa hispida]8.8e-1945.64Show/hide
Query:  NKVDQVLRQLFHAY-------SSSSSSGSGSDSVSIITEENGEA-----------------------QTMDVDDESE-------TYGFARSFSSVETTTF
        N V+ VLR+LFH Y       SS+SSS S S SVS+    +  A                         +DVD E+E        YG   SF   ETTTF
Subjt:  NKVDQVLRQLFHAY-------SSSSSSGSGSDSVSIITEENGEA-----------------------QTMDVDDESE-------TYGFARSFSSVETTTF

Query:  VRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV
         +ESEIDVYLLE+L   DS+FD+L WWK N H+FE+LS ISRD+LAIPV
Subjt:  VRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV

TrEMBL top hitse value%identityAlignment
A0A1S4E5K1 zinc finger BED domain-containing protein RICESLEEPER 2-like4.7e-1845.32Show/hide
Query:  TNKVDQVLRQLFHAYSSSSSSGS-GSDSVSIITEENGEAQT--------------------MDVDDESET-----YGFARSFSSVETTTFVRESEIDVYL
        T  V+ VLR+LFH Y+   SSG+  S S S  T  +  A                       DV D+ ET     YG   SF  VETTT  +ESEIDVYL
Subjt:  TNKVDQVLRQLFHAYSSSSSSGS-GSDSVSIITEENGEAQT--------------------MDVDDESET-----YGFARSFSSVETTTFVRESEIDVYL

Query:  LETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV
        L++L   DS+FD+L WWK N ++FE+LS ISRD+LAIPV
Subjt:  LETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLLAIPV

A0A5A7SRK8 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.5e-1139.52Show/hide
Query:  MTNKVDQVLRQLFHAYSSS-SSSGSGSDSVSIITEENGEAQTMDVD-DESETYG-------FARSFSSVETTTFVR-ESEIDVYLLETLAKDDSSFDLLN
        M N V+Q  R+LFH YS++ S S  G  S S  + +       ++D D +E  G           F    TT F +  SEID+YLLE   + +  FD+L 
Subjt:  MTNKVDQVLRQLFHAYSSS-SSSGSGSDSVSIITEENGEAQTMDVD-DESETYG-------FARSFSSVETTTFVR-ESEIDVYLLETLAKDDSSFDLLN

Query:  WWKHNSHQFEILSAISRDLLAIPV
        WWK NS +FE+L  ++RD+LAIPV
Subjt:  WWKHNSHQFEILSAISRDLLAIPV

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like1.5e-1139.52Show/hide
Query:  MTNKVDQVLRQLFHAYSSS-SSSGSGSDSVSIITEENGEAQTMDVD-DESETYG-------FARSFSSVETTTFVR-ESEIDVYLLETLAKDDSSFDLLN
        M N V+Q  R+LFH YS++ S S  G  S S  + +       ++D D +E  G           F    TT F +  SEID+YLLE   + +  FD+L 
Subjt:  MTNKVDQVLRQLFHAYSSS-SSSGSGSDSVSIITEENGEAQTMDVD-DESETYG-------FARSFSSVETTTFVR-ESEIDVYLLETLAKDDSSFDLLN

Query:  WWKHNSHQFEILSAISRDLLAIPV
        WWK NS +FE+L  ++RD+LAIPV
Subjt:  WWKHNSHQFEILSAISRDLLAIPV

A0A5D3DXX1 Transposase3.0e-1240.32Show/hide
Query:  MTNKVDQVLRQLFHAYSSS-SSSGSGSDSVSIITEENGEAQTMDVD-DESETYG-------FARSFSSVETTTF-VRESEIDVYLLETLAKDDSSFDLLN
        M N V+Q  R+LFH YS++ S S  G  S S  + +   +   ++D D +E  G           F    TT F  R SEID+YLLE   + +  FD+L 
Subjt:  MTNKVDQVLRQLFHAYSSS-SSSGSGSDSVSIITEENGEAQTMDVD-DESETYG-------FARSFSSVETTTF-VRESEIDVYLLETLAKDDSSFDLLN

Query:  WWKHNSHQFEILSAISRDLLAIPV
        WWK NS +FE+L  ++RD+LAIPV
Subjt:  WWKHNSHQFEILSAISRDLLAIPV

A0A5D3E6G3 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.6e-1849.15Show/hide
Query:  TNKVDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESET-----YGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNS
        T  V+ VLR+LFH Y+   SS +  D+              DV D+ ET     YG   SF  VETTT  +ESEIDVYLL++L   DS+FD+L WWK N 
Subjt:  TNKVDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESET-----YGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNS

Query:  HQFEILSAISRDLLAIPV
        ++FE+LS ISRD+LAIPV
Subjt:  HQFEILSAISRDLLAIPV

SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase1.4e-0630.56Show/hide
Query:  QVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAIS
        +V+R+L+  YSS S S   +      T ++ +   M+ +D+     F      ++    V  +E+D Y+ E L K    FD+L+WW+    ++ IL+ I+
Subjt:  QVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAIS

Query:  RDLLAIPV
        RD+LAI V
Subjt:  RDLLAIPV

P08770 Putative AC transposase1.4e-0630.56Show/hide
Query:  QVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAIS
        +V+R+L+  YSS S S   +      T ++ +   M+ +D+     F      ++    V  +E+D Y+ E L K    FD+L+WW+    ++ IL+ I+
Subjt:  QVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAIS

Query:  RDLLAIPV
        RD+LAI V
Subjt:  RDLLAIPV

Q6AVI0 Zinc finger BED domain-containing protein RICESLEEPER 29.8e-0530.51Show/hide
Query:  VDQVLRQLFHAYSSSS--------SSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNS
        VD  + +L+  Y +            G G+++ +    ENG   T     +     F    S + T+    +SE++ YL E+L      FD+LNWWK N+
Subjt:  VDQVLRQLFHAYSSSS--------SSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNS

Query:  HQFEILSAISRDLLAIPV
         +F  LS ++RD+LAIP+
Subjt:  HQFEILSAISRDLLAIPV

Q75HY5 Zinc finger BED domain-containing protein RICESLEEPER 34.4e-0529.2Show/hide
Query:  VDQVLRQLFHAYSSSSSSGSG---SDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEI
        VD  + +L+  Y++   +      +D+ + +T  NG+ + +D D           + S   T+    SE++ YL E L      F++L WWK N+ +F  
Subjt:  VDQVLRQLFHAYSSSSSSGSG---SDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEI

Query:  LSAISRDLLAIPV
        LS ++RD+LAIP+
Subjt:  LSAISRDLLAIPV

Q9M2N5 Zinc finger BED domain-containing protein DAYSLEEPER1.8e-0634.55Show/hide
Query:  VDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSA
        VD  + +LF  Y +  S  +        T E G+A  +    + +TY        +ETT    +SE+D YL ETL      FD+L+WWK N  ++  LS 
Subjt:  VDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSA

Query:  ISRDLLAIPV
        ++RD+L+IPV
Subjt:  ISRDLLAIPV

Arabidopsis top hitse value%identityAlignment
AT3G42170.1 BED zinc finger ;hAT family dimerisation domain1.3e-0734.55Show/hide
Query:  VDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSA
        VD  + +LF  Y +  S  +        T E G+A  +    + +TY        +ETT    +SE+D YL ETL      FD+L+WWK N  ++  LS 
Subjt:  VDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSA

Query:  ISRDLLAIPV
        ++RD+L+IPV
Subjt:  ISRDLLAIPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAATAAGGTAGATCAGGTTTTGAGACAACTCTTCCATGCATATAGTTCATCTTCTTCTAGTGGTAGTGGCAGTGACAGTGTAAGTATCATTACTGAAGAAAATGG
TGAGGCTCAAACAATGGATGTTGATGATGAGAGTGAGACATATGGATTTGCACGTTCATTCTCAAGTGTCGAGACTACTACCTTCGTTAGAGAGTCAGAGATTGATGTGT
ATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACCTTCTTAATTGGTGGAAGCATAATAGTCATCAGTTTGAGATTCTCAGTGCAATAAGTAGAGATCTTTTG
GCAATTCCAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAAATAAGGTAGATCAGGTTTTGAGACAACTCTTCCATGCATATAGTTCATCTTCTTCTAGTGGTAGTGGCAGTGACAGTGTAAGTATCATTACTGAAGAAAATGG
TGAGGCTCAAACAATGGATGTTGATGATGAGAGTGAGACATATGGATTTGCACGTTCATTCTCAAGTGTCGAGACTACTACCTTCGTTAGAGAGTCAGAGATTGATGTGT
ATTTATTAGAAACTCTTGCTAAGGATGATAGTAGTTTTGACCTTCTTAATTGGTGGAAGCATAATAGTCATCAGTTTGAGATTCTCAGTGCAATAAGTAGAGATCTTTTG
GCAATTCCAGTTTGA
Protein sequenceShow/hide protein sequence
MTNKVDQVLRQLFHAYSSSSSSGSGSDSVSIITEENGEAQTMDVDDESETYGFARSFSSVETTTFVRESEIDVYLLETLAKDDSSFDLLNWWKHNSHQFEILSAISRDLL
AIPV