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Lag0010581 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010581
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr1:1735760..1736629
RNA-Seq ExpressionLag0010581
SyntenyLag0010581
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]4.4e-5250.66Show/hide
Query:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPREQ-------------
        +FH  H H T++C  L +E+E LIR GYLK++V     + P  T+ G+   +P  EIRT + GP + ES RKRKA +REA    REQ             
Subjt:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPREQ-------------

Query:  --GSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPT
          GS AD+LS TA+ AM LG   LK S  PLVGFGGERV P+G IE PVTFG G  ++T++V  LVV+   +YNAILGRPT+H L+A+ STYHQ +KFPT
Subjt:  --GSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPT

Query:  KEGVGAVSGEQKMSRECYFMVLRNIDR
          GVG + GEQ++SRECY+  +R+ DR
Subjt:  KEGVGAVSGEQKMSRECYFMVLRNIDR

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]9.1e-4240.07Show/hide
Query:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKG-SNNPPLEIRTSLRGPSDGESDRKRKAAIREA-------------------
        +FH DH+H T++C  L  E++ LI+ GYLK++V     + P  T+ G+  S +P  EIRT + GP + E  RKRKA+IRE                    
Subjt:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKG-SNNPPLEIRTSLRGPSDGESDRKRKAAIREA-------------------

Query:  -----------WLEPR--------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSF
                    L P                     + GSSAD++S TA+ AM LG    K S   LV F GERV P+G  EL VTFG G  +IT ++ F
Subjt:  -----------WLEPR--------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSF

Query:  LVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQATSASG
        LV+D   +YNAILGRPT+H LKA+ STYHQ + FPT  G+G +  EQ++SRECY+  ++  DR   A++A G
Subjt:  LVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQATSASG

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]1.7e-4340.15Show/hide
Query:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPR---------------
        +FH DH H T++C  L +E+E LIR GYLK++V  +  K  + +E      +P  EI+T   GP++ E  +KRKA+++EA   P                
Subjt:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPR---------------

Query:  -----------------------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFL
                                           + GSS  ++S TA+ AM LG   LK +L PLVGFGGERV  +  I+LPVTFG G   IT++V FL
Subjt:  -----------------------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFL

Query:  VVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQATSA
        VVD   +YNAILGRPT+H LKA+ STYH+ LKFPT  G+  V GEQ++S ECY+  LR  D   +A+++
Subjt:  VVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQATSA

XP_023902012.1 uncharacterized protein LOC112013864 [Quercus suber]5.3e-4241.29Show/hide
Query:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKA---AIREAWLEPR-------------
        FH DH H T EC  L  +IE LIR+G LK F+G D     ++ +  + S  P  EIR  L G S G+S + +KA   A++   L  R             
Subjt:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKA---AIREAWLEPR-------------

Query:  ---------------------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVV
                                         + GSSAD+L   AF  M+LGRD L+P+ +PLVGFGG +V P G I LPVT G     +T  VSFLVV
Subjt:  ---------------------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVV

Query:  DCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQA
        DC  +YNAI+GRPTL+  KAV STYH  +KFPT+ GVG V G+Q  +RECY  +L   D ++QA
Subjt:  DCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQA

XP_030963320.1 uncharacterized protein LOC115984434 [Quercus lobata]4.8e-4347.2Show/hide
Query:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPREQGSSADVLSTTAFDA
        FH DH H T EC  L  +IE LIR+G L+ F+G D     ++ +  + S  P  EIR  + G S  +S R+             + GSSAD+L   AF  
Subjt:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPREQGSSADVLSTTAFDA

Query:  MKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRE
        MKLGRDRL+P  +PLVGFGG +V P G + LPV  G     +T+ VSFLVVDC  +YNAI+GRPTL+  K V STYH  +KFPT+ GVG V G+Q  +RE
Subjt:  MKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRE

Query:  CYFMVLRNIDRKVQ
        CY  +L   D +VQ
Subjt:  CYFMVLRNIDRKVQ

TrEMBL top hitse value%identityAlignment
A0A2N9G201 Integrase catalytic domain-containing protein1.5e-4543.09Show/hide
Query:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKR----PVQTEPGKGSNNPPL-EIRTSLRGPSDGESDR-KRKAAIREAWLEPR---EQGSSAD
        FH DH H T EC+ L ++IETLIR+G L+K+V      R    P Q E  + +   P+ EIRT + GP+ G + R  RKA  R ++   R   + GSSAD
Subjt:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKR----PVQTEPGKGSNNPPL-EIRTSLRGPSDGESDR-KRKAAIREAWLEPR---EQGSSAD

Query:  VLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAV
        +L   A+  M+L +D+L+P   PLVGF G++V P G + LP+T G    T+++ V FLVV+C  AYNAI+GRPTL+ L+AV STYH +LKFPT+ G+G V
Subjt:  VLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAV

Query:  SGEQKMSRECYFMVLRNIDRKVQATSASGDGRGRAFEGSSHPLPME
         G+Q  +RECY   L +  +         +    AF GS   + +E
Subjt:  SGEQKMSRECYFMVLRNIDRKVQATSASGDGRGRAFEGSSHPLPME

A0A2N9G7I2 Ribonuclease H9.8e-4243.4Show/hide
Query:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKR----PVQTEPGKGSNNPPL-EIRTSLRGPSDGESDR-KRKAAIRE----------------
        FH DH H T EC+ L ++IETLIR+G L+K+V      R    P Q E  + +   P+ EIRT + GP+ G + R  RKA  R+                
Subjt:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKR----PVQTEPGKGSNNPPL-EIRTSLRGPSDGESDR-KRKAAIRE----------------

Query:  ---AWLEPR----EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKA
           A    R    + GSSAD+L   A+  M+L +D+L+P   PLVGF G++V P G + LP+T G    T+++ V FLVV+C  AYNAI+GRPTL+ L+A
Subjt:  ---AWLEPR----EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKA

Query:  VASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVL
        V STYH +LKFPT+ G+G V G+Q  +RECY   L
Subjt:  VASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVL

A0A2N9GNB7 Ribonuclease H9.8e-4241.06Show/hide
Query:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPV-------QTEPGKGSNNPPLEIRTSLRGPSDGESDR-KRKAAIREAW------------
        FH DH H T +C+ L +++ETLIR+G L+K+V      RP        Q EP +    P  EIRT + GP+ G + R  RKA  R+              
Subjt:  FHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPV-------QTEPGKGSNNPPLEIRTSLRGPSDGESDR-KRKAAIREAW------------

Query:  -LEPR---------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLK
         L+ +         + GSSAD+L   A+  M++ +D+L+P   PLVGF G++V P G + LP+T G    T+++ V FLVV+C  AYNAI+GRPTL+ L+
Subjt:  -LEPR---------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLK

Query:  AVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQAT
        AV STYH +LKFPT+ G+G V G+Q  +RECY   L +  R    T
Subjt:  AVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQAT

A0A6J1CTS4 uncharacterized protein LOC1110141472.1e-5250.66Show/hide
Query:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPREQ-------------
        +FH  H H T++C  L +E+E LIR GYLK++V     + P  T+ G+   +P  EIRT + GP + ES RKRKA +REA    REQ             
Subjt:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPREQ-------------

Query:  --GSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPT
          GS AD+LS TA+ AM LG   LK S  PLVGFGGERV P+G IE PVTFG G  ++T++V  LVV+   +YNAILGRPT+H L+A+ STYHQ +KFPT
Subjt:  --GSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPT

Query:  KEGVGAVSGEQKMSRECYFMVLRNIDR
          GVG + GEQ++SRECY+  +R+ DR
Subjt:  KEGVGAVSGEQKMSRECYFMVLRNIDR

A0A6J1DV51 uncharacterized protein LOC1110246628.0e-4440.15Show/hide
Query:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPR---------------
        +FH DH H T++C  L +E+E LIR GYLK++V  +  K  + +E      +P  EI+T   GP++ E  +KRKA+++EA   P                
Subjt:  MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPR---------------

Query:  -----------------------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFL
                                           + GSS  ++S TA+ AM LG   LK +L PLVGFGGERV  +  I+LPVTFG G   IT++V FL
Subjt:  -----------------------------------EQGSSADVLSTTAFDAMKLGRDRLKPSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFL

Query:  VVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQATSA
        VVD   +YNAILGRPT+H LKA+ STYH+ LKFPT  G+  V GEQ++S ECY+  LR  D   +A+++
Subjt:  VVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQATSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCACGGAGACCACAACCATACAACCCGAGAGTGCATCCAGTTATGGGACGAGATAGAAACCCTAATCCGAGAGGGCTATCTGAAGAAATTCGTGGGGCATGACAG
AGGGAAGAGGCCAGTGCAGACAGAGCCAGGCAAGGGAAGCAATAACCCACCGCTCGAGATACGAACAAGTTTAAGAGGACCATCCGATGGAGAGTCAGACAGGAAGCGAA
AGGCCGCGATTCGAGAAGCATGGCTAGAACCGAGAGAGCAAGGGAGTTCTGCGGATGTTCTCTCAACCACCGCGTTCGATGCGATGAAGCTAGGAAGGGATCGCCTAAAG
CCAAGCCTCACACCATTGGTTGGCTTTGGTGGAGAAAGGGTAAGTCCACAAGGGTGCATCGAGCTACCGGTAACCTTTGGTGAGGGACAACATACGATCACAAGGCTAGT
CAGTTTCCTGGTGGTGGACTGTGTGCCAGCATATAATGCTATCTTGGGACGACCAACCCTGCATGGGCTGAAGGCAGTAGCTTCCACTTATCACCAAGTCCTGAAATTTC
CAACTAAAGAAGGTGTAGGGGCAGTGAGCGGCGAGCAGAAGATGTCAAGGGAGTGCTACTTTATGGTGCTCAGAAACATCGACAGAAAAGTTCAAGCAACATCGGCCTCG
GGAGATGGCCGAGGTCGAGCCTTTGAGGGATCAAGCCATCCCCTTCCGATGGAACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCACGGAGACCACAACCATACAACCCGAGAGTGCATCCAGTTATGGGACGAGATAGAAACCCTAATCCGAGAGGGCTATCTGAAGAAATTCGTGGGGCATGACAG
AGGGAAGAGGCCAGTGCAGACAGAGCCAGGCAAGGGAAGCAATAACCCACCGCTCGAGATACGAACAAGTTTAAGAGGACCATCCGATGGAGAGTCAGACAGGAAGCGAA
AGGCCGCGATTCGAGAAGCATGGCTAGAACCGAGAGAGCAAGGGAGTTCTGCGGATGTTCTCTCAACCACCGCGTTCGATGCGATGAAGCTAGGAAGGGATCGCCTAAAG
CCAAGCCTCACACCATTGGTTGGCTTTGGTGGAGAAAGGGTAAGTCCACAAGGGTGCATCGAGCTACCGGTAACCTTTGGTGAGGGACAACATACGATCACAAGGCTAGT
CAGTTTCCTGGTGGTGGACTGTGTGCCAGCATATAATGCTATCTTGGGACGACCAACCCTGCATGGGCTGAAGGCAGTAGCTTCCACTTATCACCAAGTCCTGAAATTTC
CAACTAAAGAAGGTGTAGGGGCAGTGAGCGGCGAGCAGAAGATGTCAAGGGAGTGCTACTTTATGGTGCTCAGAAACATCGACAGAAAAGTTCAAGCAACATCGGCCTCG
GGAGATGGCCGAGGTCGAGCCTTTGAGGGATCAAGCCATCCCCTTCCGATGGAACATTGA
Protein sequenceShow/hide protein sequence
MFHGDHNHTTRECIQLWDEIETLIREGYLKKFVGHDRGKRPVQTEPGKGSNNPPLEIRTSLRGPSDGESDRKRKAAIREAWLEPREQGSSADVLSTTAFDAMKLGRDRLK
PSLTPLVGFGGERVSPQGCIELPVTFGEGQHTITRLVSFLVVDCVPAYNAILGRPTLHGLKAVASTYHQVLKFPTKEGVGAVSGEQKMSRECYFMVLRNIDRKVQATSAS
GDGRGRAFEGSSHPLPMEH