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Lag0010590 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0010590
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA-directed DNA polymerase
Genome locationchr1:1862151..1862965
RNA-Seq ExpressionLag0010590
SyntenyLag0010590
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038899891.1 DNA polymerase I isoform X1 [Benincasa hispida]2.2e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLS+SLT KEETG + PSDARVMLIDGTS+IYRAYYKLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899892.1 DNA polymerase I isoform X2 [Benincasa hispida]2.2e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLS+SLT KEETG + PSDARVMLIDGTS+IYRAYYKLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899895.1 DNA polymerase I isoform X4 [Benincasa hispida]2.2e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLS+SLT KEETG + PSDARVMLIDGTS+IYRAYYKLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899896.1 DNA polymerase I isoform X5 [Benincasa hispida]2.2e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLS+SLT KEETG + PSDARVMLIDGTS+IYRAYYKLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899897.1 DNA polymerase I isoform X6 [Benincasa hispida]2.2e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLS+SLT KEETG + PSDARVMLIDGTS+IYRAYYKLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

TrEMBL top hitse value%identityAlignment
A0A6J1D7Q6 DNA-directed DNA polymerase4.3e-5181.69Show/hide
Query:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ
        MACHHLHS  ATA+ASH+CRNFLG+IFTSR+ASPLR  SSSSSL+IQSL+HHSFPSFS+L SPKGYC SSG +NAAN VDSN+TYHG SSASS+SQQMLQ
Subjt:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
         QDSL NSL  KEE G D+PSDARVMLIDGTSIIYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1D847 uncharacterized protein LOC111017796 isoform X24.3e-5181.69Show/hide
Query:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ
        MACHHLHS  ATA+ASH+CRNFLG+IFTSR+ASPLR  SSSSSL+IQSL+HHSFPSFS+L SPKGYC SSG +NAAN VDSN+TYHG SSASS+SQQMLQ
Subjt:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
         QDSL NSL  KEE G D+PSDARVMLIDGTSIIYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1EY78 DNA-directed DNA polymerase6.0e-5383.45Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLG+IFTS+FASPLR SSSSSSLRIQS  HH FPSFSVLL PKGYC SS S+NAA  VDSN+TYHGS ASS SQQMLQ+QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLSNS TCKEET  D PSDARVMLIDGTSIIYRAY+KLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1F3S3 DNA-directed DNA polymerase6.0e-5383.45Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLG+IFTS+FASPLR SSSSSSLRIQS  HH FPSFSVLL PKGYC SS S+NAA  VDSN+TYHGS ASS SQQMLQ+QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLSNS TCKEET  D PSDARVMLIDGTSIIYRAY+KLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1HVF9 DNA-directed DNA polymerase5.4e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLG+IFTS+FASPLR SSSSSSLRIQS  HH FPSFSVLLSPKGYC SS S+NAA  VDSN+TYHGS ASS SQQMLQ+QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL
        SLSNS TCKEET  D+PSDARVMLIDGTSIIYRAY+KLL
Subjt:  SLSNSLTCKEETGTDTPSDARVMLIDGTSIIYRAYYKLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52050.1 5'-3' exonuclease family protein8.6e-0442.22Show/hide
Query:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL
        S  S S+  S K YC S      A +  SN    GS+ +S S+ +     S+      +E    T   S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL

AT3G52050.2 5'-3' exonuclease family protein8.6e-0442.22Show/hide
Query:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL
        S  S S+  S K YC S      A +  SN    GS+ +S S+ +     S+      +E    T   S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL

AT3G52050.3 5'-3' exonuclease family protein8.6e-0442.22Show/hide
Query:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL
        S  S S+  S K YC S      A +  SN    GS+ +S S+ +     S+      +E    T   S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL

AT3G52050.4 5'-3' exonuclease family protein8.6e-0442.22Show/hide
Query:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL
        S  S S+  S K YC S      A +  SN    GS+ +S S+ +     S+      +E    T   S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL

AT3G52050.5 5'-3' exonuclease family protein8.6e-0442.22Show/hide
Query:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL
        S  S S+  S K YC S      A +  SN    GS+ +S S+ +     S+      +E    T   S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKEE-TGTDTPSDARVMLIDGTSIIYRAYYKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCCACCATCTTCATAGTGCGACTGCTAGTGCATCTCATGTTTGCAGAAATTTTTTGGGATTCATTTTCACGTCCAGATTTGCTTCTCCTCTTCGTTCCTCTTC
CTCTTCTTCTTCTTTGAGGATACAATCTCTTGTTCACCATTCTTTTCCGTCTTTCTCCGTTCTGCTATCCCCGAAGGGATACTGTATTTCATCCGGAAGTATAAATGCTG
CCAATACTGTAGATAGCAATTCAACTTATCATGGCAGTTCTGCATCTTCTAGAAGCCAGCAAATGCTGCAACTCCAAGATTCATTGTCAAATTCACTCACGTGCAAAGAA
GAAACTGGAACTGACACTCCTTCAGATGCCAGAGTCATGCTAATTGATGGCACATCAATCATTTATAGAGCATATTACAAGCTTTTGGGTATGGTTAGACTTGTCAATCA
GAACGTTATAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCCACCATCTTCATAGTGCGACTGCTAGTGCATCTCATGTTTGCAGAAATTTTTTGGGATTCATTTTCACGTCCAGATTTGCTTCTCCTCTTCGTTCCTCTTC
CTCTTCTTCTTCTTTGAGGATACAATCTCTTGTTCACCATTCTTTTCCGTCTTTCTCCGTTCTGCTATCCCCGAAGGGATACTGTATTTCATCCGGAAGTATAAATGCTG
CCAATACTGTAGATAGCAATTCAACTTATCATGGCAGTTCTGCATCTTCTAGAAGCCAGCAAATGCTGCAACTCCAAGATTCATTGTCAAATTCACTCACGTGCAAAGAA
GAAACTGGAACTGACACTCCTTCAGATGCCAGAGTCATGCTAATTGATGGCACATCAATCATTTATAGAGCATATTACAAGCTTTTGGGTATGGTTAGACTTGTCAATCA
GAACGTTATAATTTAA
Protein sequenceShow/hide protein sequence
MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLTCKE
ETGTDTPSDARVMLIDGTSIIYRAYYKLLGMVRLVNQNVII